BLASTX nr result

ID: Acanthopanax21_contig00026959 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00026959
         (640 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ39455.1| putative RNA helicase [Rosa chinensis]                  61   9e-08
gb|KCW63663.1| hypothetical protein EUGRSUZ_G01304 [Eucalyptus g...    56   7e-07
ref|XP_021829810.1| uncharacterized protein LOC110770040 [Prunus...    56   2e-06
ref|XP_020420958.1| uncharacterized protein LOC109949534 [Prunus...    56   2e-06
ref|XP_001621948.1| hypothetical protein NEMVEDRAFT_v1g143109 [N...    58   3e-06
ref|XP_008235530.1| PREDICTED: uncharacterized PE-PGRS family pr...    54   1e-05

>gb|PRQ39455.1| putative RNA helicase [Rosa chinensis]
          Length = 238

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
 Frame = +2

Query: 218 WWRED--RNCWYGWD*RNRCWDGGQCGSWKRG*CHLWNSRYGGQRWQC-GLRQGRSCW*C 388
           WWR+   R CW  W     CW  G+ G W+R  C          RW+C G    RS W C
Sbjct: 112 WWRKRWWRRCW--WRLWRWCW--GRSGWWRR--C----------RWRCWGRFWRRSWWRC 155

Query: 389 W---QWWNGCRWKCWQ---GWQWRQCSYW 457
           W   +WW  CRW+CW+   G  WR+  +W
Sbjct: 156 WGRSRWWRRCRWRCWRRRWGRFWRRSRWW 184


>gb|KCW63663.1| hypothetical protein EUGRSUZ_G01304 [Eucalyptus grandis]
          Length = 94

 Score = 55.8 bits (133), Expect = 7e-07
 Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
 Frame = +2

Query: 182 IITSNSGAGSGWWWREDRNCWYGWD*RNRCWDGGQCGSWKRG*CHLWNSRY--------- 334
           ++  +SGAG GW   + RN     D R R  D       ++G  H W +R          
Sbjct: 1   MVLKSSGAG-GWRRSKKRN---RRDFRERSRDARHR---RQGGGHGWQARKWWQSSLGQC 53

Query: 335 ---GGQRWQCGLRQGRSCW*CWQWWNGCRWKCWQGWQWRQ 445
              GGQ WQCGLRQ R  W    WW+G  W+C  G QWRQ
Sbjct: 54  WLCGGQHWQCGLRQSR--WDGRHWWHGDLWQCRHGRQWRQ 91


>ref|XP_021829810.1| uncharacterized protein LOC110770040 [Prunus avium]
          Length = 151

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
 Frame = +3

Query: 318 FGIVGM--VGRDGNVGFGRAGAVGSVGNGGTVAVGSVGRXXXXXXXXXXXXXXXXXXXXX 491
           FGIVG+  +G++GNVGFG AG  G VG+GG  A+GSVG+                     
Sbjct: 36  FGIVGIWVLGKEGNVGFGSAGIKGVVGSGGNAALGSVGKEGSGGNVALGMGRDGMVGSVN 95

Query: 492 XXXXXEVCSRLRAAKLI*RLESNNA 566
                 V  R RAA+L  RL+ +NA
Sbjct: 96  AGGGAAVSRRCRAARLTSRLDKHNA 120


>ref|XP_020420958.1| uncharacterized protein LOC109949534 [Prunus persica]
 gb|ONI02433.1| hypothetical protein PRUPE_6G198400 [Prunus persica]
          Length = 140

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +3

Query: 318 FGIVGM--VGRDGNVGFGRAGAVGSVGNGGTVAVGSVGRXXXXXXXXXXXXXXXXXXXXX 491
           FGI G+  +G++GNVGFG AG  G VGNGG  A+GSVG+                     
Sbjct: 36  FGIDGICVLGKEGNVGFGSAGIKGVVGNGGNAALGSVGKEGSGGNVALGIGRDGMVGSVN 95

Query: 492 XXXXXEVCSRLRAAKLI*RLESNNA 566
                 V  R RAA+L  RL+ +NA
Sbjct: 96  AGGGAAVSRRFRAARLTSRLDKHNA 120


>ref|XP_001621948.1| hypothetical protein NEMVEDRAFT_v1g143109 [Nematostella vectensis]
 gb|EDO29848.1| predicted protein, partial [Nematostella vectensis]
          Length = 388

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
 Frame = +2

Query: 194 NSGAGSGWW--WREDRNCWYGWD*RNRCWDGGQCGSWKRG*---CHLWNSRYGGQRWQCG 358
           NS   S WW  WR  RNCW     R   W   +  SW RG    C  WNS   G  W C 
Sbjct: 23  NSWTRSTWWACWR--RNCWT----RGTWWACWRWNSWTRGTWWACWRWNSWTRGTWWACW 76

Query: 359 LRQG---RSCW*CWQWWNGCR---WKCWQGWQWRQCSYW 457
            R      + W CW+W +  R   W CW+   W + ++W
Sbjct: 77  RRNSWTRGNWWACWRWNSWTRSTWWACWRWNCWTRGTWW 115


>ref|XP_008235530.1| PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS46-like
           [Prunus mume]
          Length = 140

 Score = 53.9 bits (128), Expect = 1e-05
 Identities = 34/85 (40%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +3

Query: 318 FGIVGM--VGRDGNVGFGRAGAVGSVGNGGTVAVGSVGRXXXXXXXXXXXXXXXXXXXXX 491
           FGI G+  +G+ GNVGFG AG  G VGNGG  A+GSVG+                     
Sbjct: 36  FGIDGIWVLGKAGNVGFGSAGIKGVVGNGGNAALGSVGKEGSGGNVALGMGRDGMVGSGN 95

Query: 492 XXXXXEVCSRLRAAKLI*RLESNNA 566
                 V  R RAA+L  RL+ +NA
Sbjct: 96  AGGGAAVSRRCRAARLTSRLDKHNA 120


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