BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00026877
         (479 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN32325.1| Photosystem II reaction center W protein, chlorop...    49   2e-10
ref|XP_016724700.1| PREDICTED: photosystem II reaction center W ...    47   7e-10
ref|XP_017625263.1| PREDICTED: photosystem II reaction center W ...    48   8e-10
ref|XP_012476246.1| PREDICTED: photosystem II reaction center W ...    48   8e-10
ref|XP_012441765.1| PREDICTED: photosystem II reaction center W ...    48   8e-10
gb|PPS13951.1| hypothetical protein GOBAR_AA06646 [Gossypium bar...    48   1e-09
ref|XP_016746745.1| PREDICTED: photosystem II reaction center W ...    48   1e-09
ref|XP_017610133.1| PREDICTED: photosystem II reaction center W ...    48   1e-09
gb|OWM75238.1| hypothetical protein CDL15_Pgr023759 [Punica gran...    47   2e-09
ref|XP_023733444.1| photosystem II reaction center W protein, ch...    48   3e-09
ref|XP_021987409.1| photosystem II reaction center W protein, ch...    48   3e-09
pdb|5XNL|W Chain W, Structure Of Stacked C2s2m2-type Psii-lhcii ...    47   4e-09
dbj|GAV86264.1| PsbW domain-containing protein [Cephalotus folli...    50   5e-09
gb|KVH94336.1| Photosystem II PsbW, class 2 [Cynara cardunculus ...    48   7e-09

>gb|KHN32325.1| Photosystem II reaction center W protein, chloroplastic [Glycine
           soja]
          Length = 123

 Score = 48.5 bits (114), Expect(2) = 2e-10
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLGLDPFRYILG*FGL 202
           VDERLSTEGTGLPFGLSNNLLG      + G FGL
Sbjct: 71  VDERLSTEGTGLPFGLSNNLLGW----ILFGVFGL 101



 Score = 44.3 bits (103), Expect(2) = 2e-10
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FGLIWTLYFVYTS LEE+EES L+
Sbjct: 99  FGLIWTLYFVYTSTLEEDEESGLS 122


>ref|XP_016724700.1| PREDICTED: photosystem II reaction center W protein,
           chloroplastic-like [Gossypium hirsutum]
          Length = 131

 Score = 47.0 bits (110), Expect(3) = 7e-10
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLG 241
           VDER+STEGTGLPFGLSNNLLG
Sbjct: 79  VDERMSTEGTGLPFGLSNNLLG 100



 Score = 42.0 bits (97), Expect(3) = 7e-10
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FG+IW LYFVYTS LEE+EES L+
Sbjct: 107 FGVIWALYFVYTSSLEEDEESGLS 130



 Score = 21.6 bits (44), Expect(3) = 7e-10
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 245 LGWILFDIFWV 213
           LGWILF +F V
Sbjct: 99  LGWILFGLFGV 109


>ref|XP_017625263.1| PREDICTED: photosystem II reaction center W protein,
           chloroplastic-like [Gossypium arboreum]
 gb|KHF99710.1| Photosystem II reaction center W, chloroplastic [Gossypium
           arboreum]
 gb|PPS05889.1| hypothetical protein GOBAR_AA14758 [Gossypium barbadense]
          Length = 131

 Score = 47.8 bits (112), Expect(2) = 8e-10
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLGLDPFRYILG*FGL 202
           VDER+STEGTGLPFGLSNNLLG      + G FGL
Sbjct: 79  VDERMSTEGTGLPFGLSNNLLGW----ILFGVFGL 109



 Score = 43.1 bits (100), Expect(2) = 8e-10
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FGLIW LYFVYTS LEE+EES L+
Sbjct: 107 FGLIWALYFVYTSSLEEDEESGLS 130


>ref|XP_012476246.1| PREDICTED: photosystem II reaction center W protein,
           chloroplastic-like [Gossypium raimondii]
 gb|KJB25974.1| hypothetical protein B456_004G219000 [Gossypium raimondii]
          Length = 130

 Score = 47.8 bits (112), Expect(2) = 8e-10
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLGLDPFRYILG*FGL 202
           VDER+STEGTGLPFGLSNNLLG      + G FGL
Sbjct: 78  VDERMSTEGTGLPFGLSNNLLGW----ILFGVFGL 108



 Score = 43.1 bits (100), Expect(2) = 8e-10
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FGLIW LYFVYTS LEE+EES L+
Sbjct: 106 FGLIWALYFVYTSSLEEDEESGLS 129


>ref|XP_012441765.1| PREDICTED: photosystem II reaction center W protein,
           chloroplastic-like [Gossypium raimondii]
 ref|XP_016724985.1| PREDICTED: photosystem II reaction center W protein,
           chloroplastic-like [Gossypium hirsutum]
 gb|KJB11157.1| hypothetical protein B456_001G243300 [Gossypium raimondii]
 gb|PPD68158.1| hypothetical protein GOBAR_DD34964 [Gossypium barbadense]
          Length = 129

 Score = 47.8 bits (112), Expect(2) = 8e-10
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLGLDPFRYILG*FGL 202
           VDER+STEGTGLPFGLSNNLLG      + G FGL
Sbjct: 77  VDERMSTEGTGLPFGLSNNLLGW----ILFGVFGL 107



 Score = 43.1 bits (100), Expect(2) = 8e-10
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FGLIW LYFVYTS LEE+EES L+
Sbjct: 105 FGLIWALYFVYTSSLEEDEESGLS 128


>gb|PPS13951.1| hypothetical protein GOBAR_AA06646 [Gossypium barbadense]
          Length = 129

 Score = 47.8 bits (112), Expect(2) = 1e-09
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLGLDPFRYILG*FGL 202
           VDER+STEGTGLPFGLSNNLLG      + G FGL
Sbjct: 77  VDERMSTEGTGLPFGLSNNLLGW----ILFGVFGL 107



 Score = 42.7 bits (99), Expect(2) = 1e-09
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FGLIW LYF+YTS LEE+EES L+
Sbjct: 105 FGLIWALYFIYTSSLEEDEESGLS 128


>ref|XP_016746745.1| PREDICTED: photosystem II reaction center W protein,
           chloroplastic-like [Gossypium hirsutum]
          Length = 129

 Score = 47.8 bits (112), Expect(2) = 1e-09
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLGLDPFRYILG*FGL 202
           VDER+STEGTGLPFGLSNNLLG      + G FGL
Sbjct: 77  VDERMSTEGTGLPFGLSNNLLGW----ILFGVFGL 107



 Score = 42.7 bits (99), Expect(2) = 1e-09
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FGLIW LYF+YTS LEE+EES L+
Sbjct: 105 FGLIWALYFIYTSSLEEDEESGLS 128


>ref|XP_017610133.1| PREDICTED: photosystem II reaction center W protein,
           chloroplastic-like [Gossypium arboreum]
 gb|KHG16614.1| Photosystem II reaction center W, chloroplastic [Gossypium
           arboreum]
          Length = 129

 Score = 47.8 bits (112), Expect(2) = 1e-09
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLGLDPFRYILG*FGL 202
           VDER+STEGTGLPFGLSNNLLG      + G FGL
Sbjct: 77  VDERMSTEGTGLPFGLSNNLLGW----ILFGVFGL 107



 Score = 42.7 bits (99), Expect(2) = 1e-09
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FGLIW LYF+YTS LEE+EES L+
Sbjct: 105 FGLIWALYFIYTSSLEEDEESGLS 128


>gb|OWM75238.1| hypothetical protein CDL15_Pgr023759 [Punica granatum]
          Length = 96

 Score = 46.6 bits (109), Expect(2) = 2e-09
 Identities = 24/35 (68%), Positives = 27/35 (77%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLGLDPFRYILG*FGL 202
           VDER+STEGTGLPFGLSNN+LG      + G FGL
Sbjct: 44  VDERMSTEGTGLPFGLSNNVLGW----ILFGVFGL 74



 Score = 42.7 bits (99), Expect(2) = 2e-09
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FGLIW LYF YTSGL+E+EES L+
Sbjct: 72  FGLIWALYFTYTSGLDEDEESGLS 95


>ref|XP_023733444.1| photosystem II reaction center W protein, chloroplastic-like
           [Lactuca sativa]
 gb|PLY74087.1| hypothetical protein LSAT_9X9761 [Lactuca sativa]
          Length = 129

 Score = 47.8 bits (112), Expect(2) = 3e-09
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLGLDPFRYILG*FGL 202
           VDER+STEGTGLPFGLSNNLLG      + G FGL
Sbjct: 77  VDERMSTEGTGLPFGLSNNLLGW----ILFGVFGL 107



 Score = 41.2 bits (95), Expect(2) = 3e-09
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FGLIWTLYFVYT  L+E+E+S L+
Sbjct: 105 FGLIWTLYFVYTGSLDEDEDSGLS 128


>ref|XP_021987409.1| photosystem II reaction center W protein, chloroplastic-like
           [Helianthus annuus]
 gb|OTG09885.1| putative photosystem II PsbW, class 2 [Helianthus annuus]
          Length = 125

 Score = 47.8 bits (112), Expect(2) = 3e-09
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLGLDPFRYILG*FGL 202
           VDER+STEGTGLPFGLSNNLLG      + G FGL
Sbjct: 73  VDERMSTEGTGLPFGLSNNLLGW----ILFGVFGL 103



 Score = 41.2 bits (95), Expect(2) = 3e-09
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FGLIWTLYFVYT  L+E+E+S L+
Sbjct: 101 FGLIWTLYFVYTGSLDEDEDSGLS 124


>pdb|5XNL|W Chain W, Structure Of Stacked C2s2m2-type Psii-lhcii Supercomplex
           From Pisum Sativum
 pdb|5XNL|WW Chain w, Structure Of Stacked C2s2m2-type Psii-lhcii Supercomplex
           From Pisum Sativum
 pdb|5XNM|W Chain W, Structure Of Unstacked C2s2m2-type Psii-lhcii Supercomplex
           From Pisum Sativum
 pdb|5XNM|WW Chain w, Structure Of Unstacked C2s2m2-type Psii-lhcii Supercomplex
           From Pisum Sativum
          Length = 54

 Score = 46.6 bits (109), Expect(2) = 4e-09
 Identities = 24/35 (68%), Positives = 27/35 (77%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLGLDPFRYILG*FGL 202
           VD+R+STEGTGLPFGLSNNLLG      + G FGL
Sbjct: 2   VDDRMSTEGTGLPFGLSNNLLGW----ILFGVFGL 32



 Score = 42.0 bits (97), Expect(2) = 4e-09
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FGLIW LYF+Y SGL+E+EES L+
Sbjct: 30  FGLIWALYFIYASGLDEDEESGLS 53


>dbj|GAV86264.1| PsbW domain-containing protein [Cephalotus follicularis]
          Length = 136

 Score = 50.1 bits (118), Expect(2) = 5e-09
 Identities = 27/35 (77%), Positives = 28/35 (80%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLGLDPFRYILG*FGL 202
           VDERLSTEGTGLPFGLSNNLLG      +LG FGL
Sbjct: 84  VDERLSTEGTGLPFGLSNNLLGW----ILLGVFGL 114



 Score = 38.1 bits (87), Expect(2) = 5e-09
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FGLIW+ YF YT+ LEE+E+S L+
Sbjct: 112 FGLIWSFYFAYTASLEEDEDSGLS 135


>gb|KVH94336.1| Photosystem II PsbW, class 2 [Cynara cardunculus var. scolymus]
          Length = 125

 Score = 47.8 bits (112), Expect(2) = 7e-09
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = -3

Query: 306 VDERLSTEGTGLPFGLSNNLLGLDPFRYILG*FGL 202
           VDER+STEGTGLPFGLSNNLLG      + G FGL
Sbjct: 73  VDERMSTEGTGLPFGLSNNLLGW----ILFGVFGL 103



 Score = 40.0 bits (92), Expect(2) = 7e-09
 Identities = 16/24 (66%), Positives = 21/24 (87%)
 Frame = -2

Query: 220 FGLIWTLYFVYTSGLEENEESELA 149
           FGLIWTLYFVYT  L+E+++S L+
Sbjct: 101 FGLIWTLYFVYTGSLDEDDDSGLS 124