BLASTX nr result

ID: Acanthopanax21_contig00026761 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00026761
         (554 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHB17746.1| GA repressor DELLA [Actinidia deliciosa]                56   9e-06

>gb|AHB17746.1| GA repressor DELLA [Actinidia deliciosa]
          Length = 581

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 30/54 (55%), Positives = 36/54 (66%)
 Frame = +2

Query: 392 IKRDREREKGEXXXXXXXXXXXXGKGKICVEEQPDVGGMDELLAVLGYKVRSSD 553
           +KRDR+R+K E             KGK+   EQ DVGGMDELLAVLGYKV++SD
Sbjct: 1   MKRDRDRDKAESSSMAATAAE---KGKMWTAEQADVGGMDELLAVLGYKVKASD 51


Top