BLASTX nr result

ID: Acanthopanax21_contig00026736 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00026736
         (440 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM99589.1| hypothetical protein DCAR_013049 [Daucus carota s...    69   1e-10
ref|XP_017245995.1| PREDICTED: chromatin structure-remodeling co...    69   1e-10
ref|XP_017245992.1| PREDICTED: chromatin structure-remodeling co...    69   1e-10
ref|XP_017245996.1| PREDICTED: chromatin structure-remodeling co...    63   2e-08

>gb|KZM99589.1| hypothetical protein DCAR_013049 [Daucus carota subsp. sativus]
          Length = 3568

 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
 Frame = -3

Query: 435  EQLSDLRSGTDGDLGGPTISDTLTDITENQSLGDGKCSALSALETMIVTQSSDNKTNSAL 256
            E    ++  T+  L  P   DT TDI+  Q+L  GK SAL  +ET I T+ S++ +N A 
Sbjct: 2787 ESSGKVKDITNASLEAPE-GDTSTDISVIQTLESGKVSALCDMETSIATEGSNDTSNLAS 2845

Query: 255  STLETDPDSDLVKVGSPSEKDGGEKVEAVVKPLLDGSVAPTLEVHKS-ESQRNAADCVQN 79
            S  ETD  SD  KVGSP EK    K+E V  P +D  V    + +KS E    + D +Q+
Sbjct: 2846 SNFETDQTSDAAKVGSPVEKICAGKLEEV--PEVDVFVQDIADTNKSTEESLRSKDEIQH 2903

Query: 78   IADPEI 61
            +++  +
Sbjct: 2904 VSEKSV 2909



 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 45/114 (39%), Positives = 62/114 (54%)
 Frame = -3

Query: 390  GPTISDTLTDITENQSLGDGKCSALSALETMIVTQSSDNKTNSALSTLETDPDSDLVKVG 211
            G T  DT   I+E Q+L     SA+S +ET I T  S + +N A STLET+  SD  KVG
Sbjct: 2285 GATQGDTSNIISETQNLESKIVSAVSNMETCIATLDSGDTSNLASSTLETNQTSDAAKVG 2344

Query: 210  SPSEKDGGEKVEAVVKPLLDGSVAPTLEVHKSESQRNAADCVQNIADPEIFIEE 49
            SP EK+   K+E V  P +D S +P +  +           VQ+IA+ + F +E
Sbjct: 2345 SPVEKECCGKLEEV--PGVDTSESPKINSY-----------VQDIAETDKFTQE 2385


>ref|XP_017245995.1| PREDICTED: chromatin structure-remodeling complex protein SYD isoform
            X2 [Daucus carota subsp. sativus]
          Length = 3635

 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
 Frame = -3

Query: 435  EQLSDLRSGTDGDLGGPTISDTLTDITENQSLGDGKCSALSALETMIVTQSSDNKTNSAL 256
            E    ++  T+  L  P   DT TDI+  Q+L  GK SAL  +ET I T+ S++ +N A 
Sbjct: 2854 ESSGKVKDITNASLEAPE-GDTSTDISVIQTLESGKVSALCDMETSIATEGSNDTSNLAS 2912

Query: 255  STLETDPDSDLVKVGSPSEKDGGEKVEAVVKPLLDGSVAPTLEVHKS-ESQRNAADCVQN 79
            S  ETD  SD  KVGSP EK    K+E V  P +D  V    + +KS E    + D +Q+
Sbjct: 2913 SNFETDQTSDAAKVGSPVEKICAGKLEEV--PEVDVFVQDIADTNKSTEESLRSKDEIQH 2970

Query: 78   IADPEI 61
            +++  +
Sbjct: 2971 VSEKSV 2976



 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 45/114 (39%), Positives = 62/114 (54%)
 Frame = -3

Query: 390  GPTISDTLTDITENQSLGDGKCSALSALETMIVTQSSDNKTNSALSTLETDPDSDLVKVG 211
            G T  DT   I+E Q+L     SA+S +ET I T  S + +N A STLET+  SD  KVG
Sbjct: 2355 GATQGDTSNIISETQNLESKIVSAVSNMETCIATLDSGDTSNLASSTLETNQTSDAAKVG 2414

Query: 210  SPSEKDGGEKVEAVVKPLLDGSVAPTLEVHKSESQRNAADCVQNIADPEIFIEE 49
            SP EK+   K+E V  P +D S +P +  +           VQ+IA+ + F +E
Sbjct: 2415 SPVEKECCGKLEEV--PGVDTSESPKINSY-----------VQDIAETDKFTQE 2455


>ref|XP_017245992.1| PREDICTED: chromatin structure-remodeling complex protein SYD isoform
            X1 [Daucus carota subsp. sativus]
 ref|XP_017245993.1| PREDICTED: chromatin structure-remodeling complex protein SYD isoform
            X1 [Daucus carota subsp. sativus]
 ref|XP_017245994.1| PREDICTED: chromatin structure-remodeling complex protein SYD isoform
            X1 [Daucus carota subsp. sativus]
          Length = 3638

 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
 Frame = -3

Query: 435  EQLSDLRSGTDGDLGGPTISDTLTDITENQSLGDGKCSALSALETMIVTQSSDNKTNSAL 256
            E    ++  T+  L  P   DT TDI+  Q+L  GK SAL  +ET I T+ S++ +N A 
Sbjct: 2857 ESSGKVKDITNASLEAPE-GDTSTDISVIQTLESGKVSALCDMETSIATEGSNDTSNLAS 2915

Query: 255  STLETDPDSDLVKVGSPSEKDGGEKVEAVVKPLLDGSVAPTLEVHKS-ESQRNAADCVQN 79
            S  ETD  SD  KVGSP EK    K+E V  P +D  V    + +KS E    + D +Q+
Sbjct: 2916 SNFETDQTSDAAKVGSPVEKICAGKLEEV--PEVDVFVQDIADTNKSTEESLRSKDEIQH 2973

Query: 78   IADPEI 61
            +++  +
Sbjct: 2974 VSEKSV 2979



 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 45/114 (39%), Positives = 62/114 (54%)
 Frame = -3

Query: 390  GPTISDTLTDITENQSLGDGKCSALSALETMIVTQSSDNKTNSALSTLETDPDSDLVKVG 211
            G T  DT   I+E Q+L     SA+S +ET I T  S + +N A STLET+  SD  KVG
Sbjct: 2355 GATQGDTSNIISETQNLESKIVSAVSNMETCIATLDSGDTSNLASSTLETNQTSDAAKVG 2414

Query: 210  SPSEKDGGEKVEAVVKPLLDGSVAPTLEVHKSESQRNAADCVQNIADPEIFIEE 49
            SP EK+   K+E V  P +D S +P +  +           VQ+IA+ + F +E
Sbjct: 2415 SPVEKECCGKLEEV--PGVDTSESPKINSY-----------VQDIAETDKFTQE 2455


>ref|XP_017245996.1| PREDICTED: chromatin structure-remodeling complex protein SYD isoform
            X3 [Daucus carota subsp. sativus]
          Length = 3131

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 45/114 (39%), Positives = 62/114 (54%)
 Frame = -3

Query: 390  GPTISDTLTDITENQSLGDGKCSALSALETMIVTQSSDNKTNSALSTLETDPDSDLVKVG 211
            G T  DT   I+E Q+L     SA+S +ET I T  S + +N A STLET+  SD  KVG
Sbjct: 2355 GATQGDTSNIISETQNLESKIVSAVSNMETCIATLDSGDTSNLASSTLETNQTSDAAKVG 2414

Query: 210  SPSEKDGGEKVEAVVKPLLDGSVAPTLEVHKSESQRNAADCVQNIADPEIFIEE 49
            SP EK+   K+E V  P +D S +P +  +           VQ+IA+ + F +E
Sbjct: 2415 SPVEKECCGKLEEV--PGVDTSESPKINSY-----------VQDIAETDKFTQE 2455


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