BLASTX nr result

ID: Acanthopanax21_contig00026558 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00026558
         (558 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAV71540.1| Chromo domain-containing protein, partial [Cepha...    53   8e-06

>dbj|GAV71540.1| Chromo domain-containing protein, partial [Cephalotus follicularis]
          Length = 100

 Score = 52.8 bits (125), Expect = 8e-06
 Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
 Frame = +3

Query: 3   VQWENLPLEESTWMDYHLLKQLYPTLHLEGKVSLKGVGIVTEE----NEGQTVDEDGI 164
           VQW N+P EE+TW +   L+ L+PTLHLE KVS  G G  T +    NE +   ED +
Sbjct: 24  VQWTNMPPEEATWENLRELQDLFPTLHLEDKVSFVGSGNDTNQQTQLNEEEVTAEDEV 81


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