BLASTX nr result

ID: Acanthopanax21_contig00026061 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00026061
         (542 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO56262.1| hypothetical protein CCACVL1_26676 [Corchorus cap...    77   6e-15
gb|KVI10270.1| BTB/POZ-like protein [Cynara cardunculus var. sco...    80   2e-14

>gb|OMO56262.1| hypothetical protein CCACVL1_26676 [Corchorus capsularis]
          Length = 105

 Score = 76.6 bits (187), Expect = 6e-15
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = +1

Query: 409 LGKHGDQLLEGLFDCIHEITTAFAFSRMSDSAYRVETTSRLAQW 540
           LGK G+ LLEG FDCIHEIT+A A SRMSDSAYRVETT+RLAQW
Sbjct: 28  LGKSGEYLLEGKFDCIHEITSALALSRMSDSAYRVETTARLAQW 71


>gb|KVI10270.1| BTB/POZ-like protein [Cynara cardunculus var. scolymus]
          Length = 375

 Score = 80.5 bits (197), Expect = 2e-14
 Identities = 35/48 (72%), Positives = 43/48 (89%)
 Frame = +1

Query: 397 KKAKLGKHGDQLLEGLFDCIHEITTAFAFSRMSDSAYRVETTSRLAQW 540
           ++  LGKHG+ LL+G+FDC HEITTA AF+RM+DSAYRV+TTSRLAQW
Sbjct: 29  RQDNLGKHGELLLDGIFDCFHEITTALAFARMNDSAYRVDTTSRLAQW 76


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