BLASTX nr result
ID: Acanthopanax21_contig00025933
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00025933
(470 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011094247.1| replication protein A 32 kDa subunit B isofo... 92 2e-19
gb|PIN06588.1| Single-stranded DNA-binding replication protein A... 91 4e-19
ref|XP_022845858.1| replication protein A 32 kDa subunit B isofo... 89 2e-18
ref|XP_022845850.1| replication protein A 32 kDa subunit B isofo... 89 4e-18
ref|XP_011094248.1| replication protein A 32 kDa subunit B isofo... 85 6e-17
ref|XP_022845866.1| replication protein A 32 kDa subunit B isofo... 82 7e-16
emb|CDP08575.1| unnamed protein product [Coffea canephora] 78 7e-16
ref|XP_019154992.1| PREDICTED: replication protein A 32 kDa subu... 80 2e-15
ref|XP_011094249.1| replication protein A 32 kDa subunit B isofo... 81 2e-15
ref|XP_019154989.1| PREDICTED: replication protein A 32 kDa subu... 80 3e-15
ref|XP_017255842.1| PREDICTED: replication protein A 32 kDa subu... 80 3e-15
gb|KZM92510.1| hypothetical protein DCAR_020125 [Daucus carota s... 82 5e-15
ref|XP_016475019.1| PREDICTED: replication protein A 32 kDa subu... 79 6e-15
ref|XP_016475008.1| PREDICTED: replication protein A 32 kDa subu... 79 7e-15
ref|XP_016475001.1| PREDICTED: replication protein A 32 kDa subu... 79 7e-15
ref|XP_009770105.1| PREDICTED: replication protein A 32 kDa subu... 79 9e-15
ref|NP_001316348.1| replication protein A 32 kDa subunit B [Sola... 79 9e-15
ref|XP_009770104.1| PREDICTED: replication protein A 32 kDa subu... 79 9e-15
ref|XP_009589405.1| PREDICTED: replication protein A 32 kDa subu... 79 9e-15
ref|XP_021912732.1| replication protein A 32 kDa subunit B-like ... 77 1e-14
>ref|XP_011094247.1| replication protein A 32 kDa subunit B isoform X1 [Sesamum indicum]
Length = 279
Score = 91.7 bits (226), Expect = 2e-19
Identities = 48/85 (56%), Positives = 58/85 (68%), Gaps = 5/85 (5%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPI--FWCA 175
R VTDYNEI HF +C YVH +NT LRKLQ + GH+PNS+ +T KGYQP +
Sbjct: 145 RSVTDYNEIANHFADCMYVHCHNTRLRKLQDASQVPGHMPNSAVNTPSKGYQPTPSNHHS 204
Query: 176 LQH---GWKDIDKIVLNYLQQPLCL 241
+Q+ G K IDKIVLNYLQQP C+
Sbjct: 205 VQYNMDGVKGIDKIVLNYLQQPSCI 229
>gb|PIN06588.1| Single-stranded DNA-binding replication protein A (RPA), medium (30
kD) subunit [Handroanthus impetiginosus]
Length = 279
Score = 90.9 bits (224), Expect = 4e-19
Identities = 46/85 (54%), Positives = 59/85 (69%), Gaps = 5/85 (5%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPI--FWCA 175
RPVTDYNEI HF +C YVH +NT LRKLQ +G++PN++ +T KGYQP +
Sbjct: 145 RPVTDYNEIANHFADCIYVHCHNTRLRKLQDAPHVLGYMPNTAVNTPSKGYQPTPSNHFS 204
Query: 176 LQH---GWKDIDKIVLNYLQQPLCL 241
+Q+ G K +DKIVLNYLQQP C+
Sbjct: 205 VQYNVDGVKGLDKIVLNYLQQPSCI 229
>ref|XP_022845858.1| replication protein A 32 kDa subunit B isoform X2 [Olea europaea
var. sylvestris]
Length = 259
Score = 88.6 bits (218), Expect = 2e-18
Identities = 47/82 (57%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQ--PIFWCA 175
RPVTDYNEI YHF EC YVH +NT LRKLQ A HIPNS+ +T KG+Q P +
Sbjct: 145 RPVTDYNEIAYHFAECVYVHGHNTRLRKLQDAATAPTHIPNSAVNTPSKGFQATPSNNFS 204
Query: 176 LQH---GWKDIDKIVLNYLQQP 232
+Q+ G K IDK+VL+YL QP
Sbjct: 205 VQYDMDGLKAIDKLVLDYLHQP 226
>ref|XP_022845850.1| replication protein A 32 kDa subunit B isoform X1 [Olea europaea
var. sylvestris]
Length = 297
Score = 88.6 bits (218), Expect = 4e-18
Identities = 47/82 (57%), Positives = 56/82 (68%), Gaps = 5/82 (6%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQ--PIFWCA 175
RPVTDYNEI YHF EC YVH +NT LRKLQ A HIPNS+ +T KG+Q P +
Sbjct: 145 RPVTDYNEIAYHFAECVYVHGHNTRLRKLQDAATAPTHIPNSAVNTPSKGFQATPSNNFS 204
Query: 176 LQH---GWKDIDKIVLNYLQQP 232
+Q+ G K IDK+VL+YL QP
Sbjct: 205 VQYDMDGLKAIDKLVLDYLHQP 226
>ref|XP_011094248.1| replication protein A 32 kDa subunit B isoform X2 [Sesamum indicum]
Length = 278
Score = 85.1 bits (209), Expect = 6e-17
Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPI--FWCA 175
R VTDYNEI HF +C YVH +NT LR LQ + GH+PNS+ +T KGYQP +
Sbjct: 145 RSVTDYNEIANHFADCMYVHCHNTRLR-LQDASQVPGHMPNSAVNTPSKGYQPTPSNHHS 203
Query: 176 LQH---GWKDIDKIVLNYLQQPLCL 241
+Q+ G K IDKIVLNYLQQP C+
Sbjct: 204 VQYNMDGVKGIDKIVLNYLQQPSCI 228
>ref|XP_022845866.1| replication protein A 32 kDa subunit B isoform X3 [Olea europaea
var. sylvestris]
Length = 258
Score = 82.0 bits (201), Expect = 7e-16
Identities = 46/82 (56%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQ--PIFWCA 175
RPVTDYNEI YHF EC YVH +NT LR LQ A HIPNS+ +T KG+Q P +
Sbjct: 145 RPVTDYNEIAYHFAECVYVHGHNTRLR-LQDAATAPTHIPNSAVNTPSKGFQATPSNNFS 203
Query: 176 LQH---GWKDIDKIVLNYLQQP 232
+Q+ G K IDK+VL+YL QP
Sbjct: 204 VQYDMDGLKAIDKLVLDYLHQP 225
>emb|CDP08575.1| unnamed protein product [Coffea canephora]
Length = 101
Score = 78.2 bits (191), Expect = 7e-16
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPIFWCALQ 181
RPVT+YNEI HF +C YVH YNT LRKLQ T ++PN +T +KGYQP
Sbjct: 17 RPVTEYNEIANHFADCIYVHCYNTRLRKLQENTSTSVNVPNLGFNTPVKGYQPSLSNQFS 76
Query: 182 HGW-----KDIDKIVLNYLQQPLCL 241
+ + ++K++L+YLQQP L
Sbjct: 77 GQYTVDRLEGVEKLILDYLQQPALL 101
>ref|XP_019154992.1| PREDICTED: replication protein A 32 kDa subunit B isoform X3
[Ipomoea nil]
Length = 229
Score = 80.5 bits (197), Expect = 2e-15
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGY---QPIFWC 172
RPV DYNEI +HF E Y + +NT LRKL A T H+PNS+ +T +KGY QP F
Sbjct: 147 RPVDDYNEIAHHFAEAIYAYCHNTKLRKLPDSANTATHVPNSAMNTPMKGYQVSQPNFSA 206
Query: 173 ALQHGWKDIDKIVLNYLQQPLCL 241
G I+K++++YL QP CL
Sbjct: 207 YNVDGITGIEKMIISYLHQPQCL 229
>ref|XP_011094249.1| replication protein A 32 kDa subunit B isoform X3 [Sesamum indicum]
Length = 276
Score = 80.9 bits (198), Expect = 2e-15
Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPI--FWCA 175
R VTDYNEI HF +C YVH +NT +L+ + GH+PNS+ +T KGYQP +
Sbjct: 145 RSVTDYNEIANHFADCMYVHCHNT---RLRDASQVPGHMPNSAVNTPSKGYQPTPSNHHS 201
Query: 176 LQH---GWKDIDKIVLNYLQQPLCL 241
+Q+ G K IDKIVLNYLQQP C+
Sbjct: 202 VQYNMDGVKGIDKIVLNYLQQPSCI 226
>ref|XP_019154989.1| PREDICTED: replication protein A 32 kDa subunit B isoform X1
[Ipomoea nil]
ref|XP_019154990.1| PREDICTED: replication protein A 32 kDa subunit B isoform X1
[Ipomoea nil]
Length = 279
Score = 80.5 bits (197), Expect = 3e-15
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGY---QPIFWC 172
RPV DYNEI +HF E Y + +NT LRKL A T H+PNS+ +T +KGY QP F
Sbjct: 147 RPVDDYNEIAHHFAEAIYAYCHNTKLRKLPDSANTATHVPNSAMNTPMKGYQVSQPNFSA 206
Query: 173 ALQHGWKDIDKIVLNYLQQPLCL 241
G I+K++++YL QP CL
Sbjct: 207 YNVDGITGIEKMIISYLHQPQCL 229
>ref|XP_017255842.1| PREDICTED: replication protein A 32 kDa subunit B [Daucus carota
subsp. sativus]
Length = 280
Score = 80.5 bits (197), Expect = 3e-15
Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 6/86 (6%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPI---FWC 172
RP+ D+NEITYHFVEC YVH+YNT LR L GG + GH+P +AS +G+Q +
Sbjct: 146 RPLKDFNEITYHFVECAYVHHYNTKLRVLGGGPV-AGHMPTPAASMPFQGHQATPSNQFP 204
Query: 173 ALQHGWKD---IDKIVLNYLQQPLCL 241
+Q+ D +DK+VL +LQQP C+
Sbjct: 205 GVQYSSGDFGGVDKMVLEFLQQPSCV 230
>gb|KZM92510.1| hypothetical protein DCAR_020125 [Daucus carota subsp. sativus]
Length = 697
Score = 81.6 bits (200), Expect = 5e-15
Identities = 46/105 (43%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPI---FWC 172
RP+ D+NEITYHFVEC YVH+YNT LR L GG + GH+P +AS +G+Q +
Sbjct: 135 RPLKDFNEITYHFVECAYVHHYNTKLRVLGGGPV-AGHMPTPAASMPFQGHQATPSNQFP 193
Query: 173 ALQHGWKD---IDKIVLNYLQQPLCLYVI*IIAKLYFIYLHSVET 298
+Q+ D +DK+VL +LQQP C+ + A F Y + T
Sbjct: 194 GVQYSSGDFGGVDKMVLEFLQQPSCVTLFAHYALSNFTYAQKLFT 238
>ref|XP_016475019.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X4
[Nicotiana tabacum]
Length = 253
Score = 79.3 bits (194), Expect = 6e-15
Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPI----FW 169
RPV DYNEI HF E YVH YN+ LRK Q + +P+S+A+T LKGYQ F
Sbjct: 120 RPVDDYNEIASHFAEVIYVHSYNSKLRKQQDSSTMSAQVPSSAANTPLKGYQASPSTQFP 179
Query: 170 CALQHGWKDIDKIVLNYLQQPLCL 241
G + +DK+VL+YLQQP CL
Sbjct: 180 GYNMDGIRGVDKMVLDYLQQPSCL 203
>ref|XP_016475008.1| PREDICTED: replication protein A 32 kDa subunit A-like isoform X2
[Nicotiana tabacum]
Length = 255
Score = 79.3 bits (194), Expect = 7e-15
Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPIFWCALQ 181
RPV DYNEI HF E YVH YN+ LRK Q + +P+S+A+T LKGYQ Q
Sbjct: 120 RPVDDYNEIASHFAEVIYVHSYNSKLRKQQDSSTMSAQVPSSAANTPLKGYQASPSTQFQ 179
Query: 182 ------HGWKDIDKIVLNYLQQPLCL 241
G + +DK+VL+YLQQP CL
Sbjct: 180 FPGYNMDGIRGVDKMVLDYLQQPSCL 205
>ref|XP_016475001.1| PREDICTED: replication protein A 32 kDa subunit A-like isoform X1
[Nicotiana tabacum]
Length = 255
Score = 79.3 bits (194), Expect = 7e-15
Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPIFWCALQ 181
RPV DYNEI HF E YVH YN+ LR+ Q + +P+S+A+T LKGYQ Q
Sbjct: 120 RPVDDYNEIASHFAEVIYVHSYNSKLRRQQDSSSMSAQVPSSAANTPLKGYQASLSTQFQ 179
Query: 182 ------HGWKDIDKIVLNYLQQPLCL 241
G + +DK+VL+YLQQP CL
Sbjct: 180 FPGYNMDGIRGVDKMVLDYLQQPSCL 205
>ref|XP_009770105.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X2
[Nicotiana sylvestris]
Length = 280
Score = 79.3 bits (194), Expect = 9e-15
Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPI----FW 169
RPV DYNEI HF E YVH YN+ LRK Q + +P+S+A+T LKGYQ F
Sbjct: 147 RPVDDYNEIASHFAEVIYVHSYNSKLRKQQDSSTMSAQVPSSAANTPLKGYQASPSTQFP 206
Query: 170 CALQHGWKDIDKIVLNYLQQPLCL 241
G + +DK+VL+YLQQP CL
Sbjct: 207 GYNMDGIRGVDKMVLDYLQQPSCL 230
>ref|NP_001316348.1| replication protein A 32 kDa subunit B [Solanum lycopersicum]
gb|ALP75899.1| RPA32b [Solanum lycopersicum]
Length = 280
Score = 79.3 bits (194), Expect = 9e-15
Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPI----FW 169
RPV DYNEI YHF + YVH YN+ LRK + +P+SS +T LKGYQ F
Sbjct: 147 RPVDDYNEIAYHFAQVIYVHSYNSSLRKQHDSSSMPSQVPSSSFNTPLKGYQASASNQFP 206
Query: 170 CALQHGWKDIDKIVLNYLQQPLCL 241
G + +DK+VL+YLQQP CL
Sbjct: 207 GYSMDGIRGVDKMVLDYLQQPSCL 230
>ref|XP_009770104.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X1
[Nicotiana sylvestris]
Length = 282
Score = 79.3 bits (194), Expect = 9e-15
Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPIFWCALQ 181
RPV DYNEI HF E YVH YN+ LRK Q + +P+S+A+T LKGYQ Q
Sbjct: 147 RPVDDYNEIASHFAEVIYVHSYNSKLRKQQDSSTMSAQVPSSAANTPLKGYQASPSTQFQ 206
Query: 182 ------HGWKDIDKIVLNYLQQPLCL 241
G + +DK+VL+YLQQP CL
Sbjct: 207 FPGYNMDGIRGVDKMVLDYLQQPSCL 232
>ref|XP_009589405.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X1
[Nicotiana tomentosiformis]
Length = 282
Score = 79.3 bits (194), Expect = 9e-15
Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPIFWCALQ 181
RPV DYNEI HF E YVH YN+ LR+ Q + +P+S+A+T LKGYQ Q
Sbjct: 147 RPVDDYNEIASHFAEVIYVHSYNSKLRRQQDSSSMSAQVPSSAANTPLKGYQASLSTQFQ 206
Query: 182 ------HGWKDIDKIVLNYLQQPLCL 241
G + +DK+VL+YLQQP CL
Sbjct: 207 FPGYNMDGIRGVDKMVLDYLQQPSCL 232
>ref|XP_021912732.1| replication protein A 32 kDa subunit B-like [Carica papaya]
Length = 155
Score = 76.6 bits (187), Expect = 1e-14
Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Frame = +2
Query: 2 RPVTDYNEITYHFVECTYVHYYNTGLRKLQGGALTVGHIPNSSASTSLKGYQPIFWCAL- 178
RPV D+NEI +HF+EC YVH Y+T +LQGG++T + N + ST LKGYQ
Sbjct: 24 RPVMDFNEIVHHFLECMYVHLYHT---RLQGGSVTQPQVTNPTMSTPLKGYQTGTSNQFP 80
Query: 179 ----QHGWKDIDKIVLNYLQQPLCL 241
G K I ++VLNYL QP CL
Sbjct: 81 GQFNDDGTKSISQMVLNYLNQPACL 105