BLASTX nr result

ID: Acanthopanax21_contig00025805 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00025805
         (435 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021981180.1| uncharacterized protein LOC110877343 isoform...    56   1e-06
ref|XP_021981179.1| uncharacterized protein LOC110877343 isoform...    56   1e-06
gb|KVI11534.1| hypothetical protein Ccrd_010055 [Cynara carduncu...    54   1e-05

>ref|XP_021981180.1| uncharacterized protein LOC110877343 isoform X2 [Helianthus annuus]
          Length = 210

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
 Frame = -2

Query: 434 KSKFLWILEKLRIKPTKKRA-ISRKSSFTGRFGFFGHEVPNW------GNLALLYQSIAE 276
           KSK    +E+ R  PTKK+A  +  SS   +      E P        GNLALL +SI E
Sbjct: 66  KSKITGFIERFRSIPTKKKASAAHNSSRNKKLKSGSCEGPVCASTVVIGNLALLIKSIYE 125

Query: 275 KEHKGIIIQCSVIFFYLISQLKDFMGRNKFILLVILSVAMM 153
           K+ KGIII C  I  Y+ + LK F+ RNK   ++++S+ +M
Sbjct: 126 KDVKGIIIHCFSILLYIFTLLKTFV-RNKNNKVIVVSITLM 165


>ref|XP_021981179.1| uncharacterized protein LOC110877343 isoform X1 [Helianthus annuus]
          Length = 210

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
 Frame = -2

Query: 434 KSKFLWILEKLRIKPTKKRA-ISRKSSFTGRFGFFGHEVPNW------GNLALLYQSIAE 276
           KSK    +E+ R  PTKK+A  +  SS   +      E P        GNLALL +SI E
Sbjct: 66  KSKITGFIERFRSIPTKKKASAAHNSSRNKKLKSGSCEGPVCASTVVIGNLALLIKSIYE 125

Query: 275 KEHKGIIIQCSVIFFYLISQLKDFMGRNKFILLVILSVAMM 153
           K+ KGIII C  I  Y+ + LK F+ RNK   ++++S+ +M
Sbjct: 126 KDVKGIIIHCFSILLYIFTLLKTFV-RNKNNKVIVVSITLM 165


>gb|KVI11534.1| hypothetical protein Ccrd_010055 [Cynara cardunculus var. scolymus]
          Length = 211

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
 Frame = -2

Query: 434 KSKFLWILEKLRIKPTKKRAIS-------RKSSFTGRFGFFGHEVPNWGNLALLYQSIAE 276
           KSK + ++EK+R +PTK++A +       ++  +    G         GNLALL QSI+E
Sbjct: 65  KSKIIGVIEKVRSRPTKRKAFAAPKPLRIKRLKWVSCEGTICATTVVIGNLALLIQSISE 124

Query: 275 KEHKGIIIQCSVIFFYLISQLKDFMGRNKFILLVILSVAMMG 150
           K+ KGIII       Y++  L+  +  N    ++I  + M+G
Sbjct: 125 KDTKGIIIHSLSXMLYILKPLRTSIRTNASKFMLISIIVMVG 166


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