BLASTX nr result

ID: Acanthopanax21_contig00025714 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00025714
         (636 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009045776.1| orf115b (mitochondrion) [Batis maritima] >gi...    75   5e-14

>ref|YP_009045776.1| orf115b (mitochondrion) [Batis maritima]
 gb|AIC83379.1| orf115b (mitochondrion) [Batis maritima]
          Length = 115

 Score = 75.5 bits (184), Expect = 5e-14
 Identities = 37/45 (82%), Positives = 38/45 (84%)
 Frame = -3

Query: 634 KITPHPFSYMRYRQKKELLILETDP*PPHGAVHSKLRTKERLNKD 500
           KITPHPFSYMRY QKKELLIL  +  P  GAVHSKLRTKERLNKD
Sbjct: 71  KITPHPFSYMRYHQKKELLILVLETDPSLGAVHSKLRTKERLNKD 115


Top