BLASTX nr result
ID: Acanthopanax21_contig00025336
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00025336
(506 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011098412.1| heterogeneous nuclear ribonucleoprotein 1-li... 74 2e-12
gb|PIN21239.1| RNA-binding protein musashi/mRNA cleavage and pol... 73 5e-12
ref|XP_022875249.1| heterogeneous nuclear ribonucleoprotein 1-li... 72 2e-11
ref|XP_022875248.1| heterogeneous nuclear ribonucleoprotein 1-li... 72 2e-11
ref|XP_010273569.1| PREDICTED: heterogeneous nuclear ribonucleop... 67 5e-10
ref|XP_016483069.1| PREDICTED: RNA-binding protein 1-like isofor... 67 6e-10
ref|XP_009610224.1| PREDICTED: RNA-binding protein 1 [Nicotiana ... 67 6e-10
ref|XP_016483067.1| PREDICTED: RNA-binding protein 1-like isofor... 66 1e-09
ref|XP_009800333.1| PREDICTED: RNA-binding protein 1 [Nicotiana ... 65 2e-09
ref|XP_019229866.1| PREDICTED: RNA-binding protein 1 [Nicotiana ... 65 3e-09
ref|XP_006356840.1| PREDICTED: RNA-binding protein 1-like [Solan... 63 2e-08
ref|XP_022848849.1| heterogeneous nuclear ribonucleoprotein 1-li... 62 3e-08
gb|KVI05185.1| G-protein beta WD-40 repeat-containing protein [C... 62 7e-08
ref|XP_019156555.1| PREDICTED: heterogeneous nuclear ribonucleop... 59 5e-07
ref|XP_019156554.1| PREDICTED: heterogeneous nuclear ribonucleop... 59 5e-07
ref|XP_017981578.1| PREDICTED: RNA-binding protein 1 [Theobroma ... 59 5e-07
gb|PHU20320.1| hypothetical protein BC332_11471 [Capsicum chinense] 58 1e-06
ref|XP_004238077.1| PREDICTED: RNA-binding protein 1 [Solanum ly... 57 1e-06
gb|EOY15656.1| RNA-binding family protein, putative [Theobroma c... 57 2e-06
ref|XP_016568913.1| PREDICTED: RNA-binding protein 1 [Capsicum a... 57 2e-06
>ref|XP_011098412.1| heterogeneous nuclear ribonucleoprotein 1-like [Sesamum indicum]
Length = 376
Score = 74.3 bits (181), Expect = 2e-12
Identities = 44/98 (44%), Positives = 54/98 (55%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVIT 182
PW+ P M GV GS LPY AA Y +Y+NG G G+A + YNGI+GT GKS Q
Sbjct: 274 PWS-PAMLGVRGSFLPYGSAAPVYPTYLNGGPGVMGLATSGYNGILGTGFGGKSVQMGSG 332
Query: 183 DAQLAADRTSSQIDQKKISVKSMDSDGSNGDVASKGSE 296
DAQ AA+ SQ + S S +G ASK S+
Sbjct: 333 DAQNAAELIPSQPGANNVDANSFSSGRGHGAAASKQSQ 370
>gb|PIN21239.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex, subunit HRP1 [Handroanthus
impetiginosus]
Length = 375
Score = 73.2 bits (178), Expect = 5e-12
Identities = 46/102 (45%), Positives = 60/102 (58%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVIT 182
PWT P M GV GS LPY A Y +Y+NG GA G+AAN YNGI+G+ GKS+Q
Sbjct: 274 PWT-PAMVGVRGSFLPYGSATPVYPTYLNGGPGAMGMAANGYNGILGSGFGGKSTQMSSG 332
Query: 183 DAQLAADRTSSQIDQKKISVKSMDSDGSNGDVASKGSELKAY 308
D+Q AA+ T+S+ I S S+ + KG++ KAY
Sbjct: 333 DSQNAAESTASRNGTDTIDANSF----SSSKQSQKGND-KAY 369
>ref|XP_022875249.1| heterogeneous nuclear ribonucleoprotein 1-like [Olea europaea var.
sylvestris]
ref|XP_022875250.1| heterogeneous nuclear ribonucleoprotein 1-like [Olea europaea var.
sylvestris]
Length = 384
Score = 71.6 bits (174), Expect = 2e-11
Identities = 39/98 (39%), Positives = 50/98 (51%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVIT 182
PW M GV GS L Y Y SY+NG G G A N YNGI+GT NGKS+Q T
Sbjct: 271 PWNASAMIGVGGSLLHYGSTTPIYPSYLNGGAGVMGFAVNGYNGILGTGFNGKSAQLGNT 330
Query: 183 DAQLAADRTSSQIDQKKISVKSMDSDGSNGDVASKGSE 296
D Q A ++ SQ + + S ++G A K ++
Sbjct: 331 DTQGAVEQMPSQTSRGNVDDNFYSSSQTDGAAADKQNQ 368
>ref|XP_022875248.1| heterogeneous nuclear ribonucleoprotein 1-like [Olea europaea var.
sylvestris]
Length = 384
Score = 71.6 bits (174), Expect = 2e-11
Identities = 39/98 (39%), Positives = 50/98 (51%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVIT 182
PW M GV GS L Y Y SY+NG G G A N YNGI+GT NGKS+Q T
Sbjct: 271 PWNASAMIGVGGSLLHYGSTTPIYPSYLNGGAGVMGFAVNGYNGILGTGFNGKSAQLGNT 330
Query: 183 DAQLAADRTSSQIDQKKISVKSMDSDGSNGDVASKGSE 296
D Q A ++ SQ + + S ++G A K ++
Sbjct: 331 DTQGAVEQMPSQTSRGNVDDNFYSSSQTDGAAADKQNQ 368
>ref|XP_010273569.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Nelumbo
nucifera]
Length = 408
Score = 67.4 bits (163), Expect = 5e-10
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGAT-GVAANVYNGIMGTVSNGKSSQRVI 179
PW+ P M G SP+PY G+A Y Y+NG +G GVA+ Y GIMG +NGK +Q
Sbjct: 295 PWSGPAMVGARRSPVPY-GSAAIYPGYVNGGVGGVLGVASGGYRGIMGPQANGKWNQSGG 353
Query: 180 TDAQLAADRTSSQIDQKKISVKSMDSDGSNGDVASKGSE 296
D+Q+ A T +ID K+ + G+ G A+K ++
Sbjct: 354 GDSQMPAGTTRPRIDGAKLDDDASAFTGNYGATANKQNQ 392
>ref|XP_016483069.1| PREDICTED: RNA-binding protein 1-like isoform X2 [Nicotiana
tabacum]
Length = 350
Score = 67.0 bits (162), Expect = 6e-10
Identities = 34/68 (50%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 PWTVPMMNGVWGS-PLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVI 179
PW P M G+ GS PLPY Y +YMNG IG GVA N Y GI+G N KS Q +I
Sbjct: 283 PWNNPTMTGLRGSSPLPYGNTGAIYPTYMNGGIGVMGVATNEYGGILGAGVNEKSGQVII 342
Query: 180 TDAQLAAD 203
D Q +D
Sbjct: 343 RDVQGVSD 350
>ref|XP_009610224.1| PREDICTED: RNA-binding protein 1 [Nicotiana tomentosiformis]
Length = 352
Score = 67.0 bits (162), Expect = 6e-10
Identities = 34/68 (50%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 PWTVPMMNGVWGS-PLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVI 179
PW P M G+ GS PLPY Y +YMNG IG GVA N Y GI+G N KS Q +I
Sbjct: 285 PWNNPTMTGLRGSSPLPYGNTGAIYPTYMNGGIGVMGVATNEYGGILGAGVNEKSGQVII 344
Query: 180 TDAQLAAD 203
D Q +D
Sbjct: 345 RDVQGVSD 352
>ref|XP_016483067.1| PREDICTED: RNA-binding protein 1-like isoform X1 [Nicotiana
tabacum]
Length = 350
Score = 66.2 bits (160), Expect = 1e-09
Identities = 33/68 (48%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 PWTVPMMNGVWG-SPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVI 179
PW P M G+ G SPLPY Y +Y+NG IG GVA N Y GI+G N KS Q +I
Sbjct: 283 PWNNPTMTGLRGNSPLPYGSTGAIYPTYINGGIGVMGVATNGYGGILGAAVNEKSGQVII 342
Query: 180 TDAQLAAD 203
D Q +D
Sbjct: 343 RDVQGVSD 350
>ref|XP_009800333.1| PREDICTED: RNA-binding protein 1 [Nicotiana sylvestris]
Length = 350
Score = 65.5 bits (158), Expect = 2e-09
Identities = 33/68 (48%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 PWTVPMMNGVWG-SPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVI 179
PW P M G+ G SPLPY Y +Y+NG IG GVA N Y GI+G N KS Q +
Sbjct: 283 PWNNPTMTGLRGNSPLPYGSTGAIYPTYINGGIGVMGVATNGYGGILGAAVNEKSGQVSV 342
Query: 180 TDAQLAAD 203
DAQ +D
Sbjct: 343 RDAQGVSD 350
>ref|XP_019229866.1| PREDICTED: RNA-binding protein 1 [Nicotiana attenuata]
gb|OIT29822.1| rna-binding protein 1 [Nicotiana attenuata]
Length = 351
Score = 65.1 bits (157), Expect = 3e-09
Identities = 33/68 (48%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 PWTVPMMNGVWGS-PLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVI 179
PW P M G+ GS PLPY Y +YMNG IG GVA N Y GI+G N KS Q +
Sbjct: 284 PWNNPTMTGLRGSSPLPYGNTGAIYPTYMNGGIGVMGVATNGYGGILGAGVNEKSGQVSV 343
Query: 180 TDAQLAAD 203
D Q +D
Sbjct: 344 RDVQRVSD 351
>ref|XP_006356840.1| PREDICTED: RNA-binding protein 1-like [Solanum tuberosum]
Length = 344
Score = 62.8 bits (151), Expect = 2e-08
Identities = 28/67 (41%), Positives = 36/67 (53%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVIT 182
PW P M G+ G PLPY FY +Y+N +G +A N Y GI+G N K Q +
Sbjct: 278 PWNNPTMTGLRGGPLPYGNTGGFYPAYINSGVGVMNMATNGYGGILGAGINEKPGQVSVR 337
Query: 183 DAQLAAD 203
DAQ +D
Sbjct: 338 DAQEVSD 344
>ref|XP_022848849.1| heterogeneous nuclear ribonucleoprotein 1-like [Olea europaea var.
sylvestris]
Length = 303
Score = 62.0 bits (149), Expect = 3e-08
Identities = 33/72 (45%), Positives = 39/72 (54%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVIT 182
PW M GV GS LPY G Y S++NG G A N YNGI+GT +GK +Q T
Sbjct: 218 PWNASAMVGVGGSLLPYGGTTPIYPSHLNGGAGVMCFAVNGYNGILGTGFSGKLAQLGNT 277
Query: 183 DAQLAADRTSSQ 218
D Q AA+ Q
Sbjct: 278 DTQGAAESMPGQ 289
>gb|KVI05185.1| G-protein beta WD-40 repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 1021
Score = 61.6 bits (148), Expect = 7e-08
Identities = 37/88 (42%), Positives = 49/88 (55%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVIT 182
PW P M + G+P P T Y +YMN G G+AAN YNGIMG+ N K SQ
Sbjct: 192 PWGPPTMVSIRGNPYPMT----VYPAYMNNGHGVMGMAANGYNGIMGSAPNEKPSQLSGG 247
Query: 183 DAQLAADRTSSQIDQKKISVKSMDSDGS 266
+ QL AD SSQ+ ++++ + DGS
Sbjct: 248 NEQLEADAGSSQLSFLQVNL-TYYKDGS 274
>ref|XP_019156555.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
X2 [Ipomoea nil]
Length = 376
Score = 58.9 bits (141), Expect = 5e-07
Identities = 32/73 (43%), Positives = 44/73 (60%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVIT 182
PW VP M G GSP+ Y G A FY +YMNG GA ++A+ +N +G +GKS Q +
Sbjct: 280 PWNVPAMAGPRGSPVLYGGTA-FYPAYMNGGAGAMSLSASGFNEFLGGGMSGKSGQFGMG 338
Query: 183 DAQLAADRTSSQI 221
++Q A+ SQI
Sbjct: 339 ESQGASGSVHSQI 351
>ref|XP_019156554.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
X1 [Ipomoea nil]
Length = 389
Score = 58.9 bits (141), Expect = 5e-07
Identities = 32/73 (43%), Positives = 44/73 (60%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVIT 182
PW VP M G GSP+ Y G A FY +YMNG GA ++A+ +N +G +GKS Q +
Sbjct: 280 PWNVPAMAGPRGSPVLYGGTA-FYPAYMNGGAGAMSLSASGFNEFLGGGMSGKSGQFGMG 338
Query: 183 DAQLAADRTSSQI 221
++Q A+ SQI
Sbjct: 339 ESQGASGSVHSQI 351
>ref|XP_017981578.1| PREDICTED: RNA-binding protein 1 [Theobroma cacao]
Length = 401
Score = 58.9 bits (141), Expect = 5e-07
Identities = 34/95 (35%), Positives = 49/95 (51%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVIT 182
P P+M G PLPY G A+ Y +YMNG +G G + VYNGI+GT +GK +Q
Sbjct: 289 PLYAPVMLGARVCPLPY-GGASIYPTYMNGGVGLMGTVSGVYNGIIGTAVDGKHTQVPGG 347
Query: 183 DAQLAADRTSSQIDQKKISVKSMDSDGSNGDVASK 287
L A+ QI+ + S+ +G +S+
Sbjct: 348 FGDLPANAIPPQIEGVNLDSGSLGLKERSGGASSE 382
>gb|PHU20320.1| hypothetical protein BC332_11471 [Capsicum chinense]
Length = 647
Score = 57.8 bits (138), Expect = 1e-06
Identities = 38/102 (37%), Positives = 50/102 (49%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVIT 182
PW P M G+ GSPLPY Y +YMNG IGA G+A N Y G +G+ + +Q +
Sbjct: 334 PWNNPTMAGIRGSPLPYGNTGVVYPAYMNGGIGAMGMATNGYGGNLGSGISVGDAQGLFC 393
Query: 183 DAQLAADRTSSQIDQKKISVKSMDSDGSNGDVASKGSELKAY 308
A L S + S GS G+ S SE++AY
Sbjct: 394 -ALLCVCVISRAL-----------SRGSFGNSLSTSSEVEAY 423
>ref|XP_004238077.1| PREDICTED: RNA-binding protein 1 [Solanum lycopersicum]
Length = 341
Score = 57.4 bits (137), Expect = 1e-06
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVIT 182
PW P M G G PL Y A FY +Y+N +G +A N Y GI+G N K Q +
Sbjct: 278 PWNNPTMTGFRGGPLSYGNAGGFYPAYINSGVGVMNMATNGYGGILGAGINEKLGQVSVR 337
Query: 183 DAQL 194
DA++
Sbjct: 338 DARV 341
>gb|EOY15656.1| RNA-binding family protein, putative [Theobroma cacao]
Length = 401
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/95 (35%), Positives = 48/95 (50%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGTVSNGKSSQRVIT 182
P P+M G PLPY G A+ Y +YMNG +G G + VYNGI+GT +GK +Q
Sbjct: 289 PLYAPVMLGARVCPLPY-GGASIYPAYMNGGVGLMGTVSGVYNGIIGTAVDGKHTQVPGG 347
Query: 183 DAQLAADRTSSQIDQKKISVKSMDSDGSNGDVASK 287
L A+ QI+ + S +G +S+
Sbjct: 348 FGDLPANAIPPQIEGVNLDSGSPGLKERSGGASSE 382
>ref|XP_016568913.1| PREDICTED: RNA-binding protein 1 [Capsicum annuum]
Length = 331
Score = 57.0 bits (136), Expect = 2e-06
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +3
Query: 3 PWTVPMMNGVWGSPLPYTGAANFYSSYMNGSIGATGVAANVYNGIMGT 146
PW P M G+ GSPLPY Y +YMNG IGA G+A N Y G +G+
Sbjct: 272 PWNNPTMAGIRGSPLPYGNTGVVYPAYMNGGIGAMGMATNGYGGNLGS 319