BLASTX nr result

ID: Acanthopanax21_contig00025156 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00025156
         (638 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP17072.1| unnamed protein product [Coffea canephora]             53   2e-06
gb|AAZ72652.1| uORF [Craterostigma plantagineum]                       52   6e-06

>emb|CDP17072.1| unnamed protein product [Coffea canephora]
          Length = 28

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = +3

Query: 327 YSVLVRRIRVLHSFSVVFLYWFYVFS 404
           Y+VL+RRIR+LHSFSVVFLYWFYVFS
Sbjct: 3   YTVLMRRIRLLHSFSVVFLYWFYVFS 28


>gb|AAZ72652.1| uORF [Craterostigma plantagineum]
          Length = 28

 Score = 51.6 bits (122), Expect = 6e-06
 Identities = 21/26 (80%), Positives = 25/26 (96%)
 Frame = +3

Query: 327 YSVLVRRIRVLHSFSVVFLYWFYVFS 404
           + +L+RRIR+LHSFSVVFLYWFYVFS
Sbjct: 3   FGILMRRIRILHSFSVVFLYWFYVFS 28


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