BLASTX nr result

ID: Acanthopanax21_contig00024964 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00024964
         (739 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021661490.1| uncharacterized protein LOC110650697 isoform...    56   2e-06

>ref|XP_021661490.1| uncharacterized protein LOC110650697 isoform X1 [Hevea
           brasiliensis]
          Length = 107

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +1

Query: 394 CGCGIRVRICTSSKGKSS*RKFYGCSNYGNESYCGFFQWIDSMTMLEDGDNCSGLL-NVK 570
           C C I   + T+  G +  R+ +GC NYG  +YCG+FQW D   +L      SGLL  + 
Sbjct: 13  CICNIEANLRTAWTGSNPGRRLHGCRNYGTSNYCGYFQWYDDPFLLRATQVISGLLRRID 72

Query: 571 NTEIELQMMTAK 606
             +++LQ    K
Sbjct: 73  RHDLDLQAARGK 84


Top