BLASTX nr result

ID: Acanthopanax21_contig00024853 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00024853
         (738 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA03881.1| Cu/Zn superoxide dismutase, partial [Citrus sine...    44   6e-07
ref|XP_024039546.1| superoxide dismutase [Cu-Zn] 1-like [Citrus ...    43   8e-06

>emb|CAA03881.1| Cu/Zn superoxide dismutase, partial [Citrus sinensis]
          Length = 126

 Score = 43.5 bits (101), Expect(2) = 6e-07
 Identities = 17/36 (47%), Positives = 27/36 (75%)
 Frame = +2

Query: 296 ISLRNENSILGRTIVLYSKSNPNPGDPLAWGVIGVA 403
           I L   NS++GR +V++S  +P+PGD +AWG IG++
Sbjct: 90  IPLSGTNSVIGRGLVVHSSPSPDPGDGVAWGTIGLS 125



 Score = 38.9 bits (89), Expect(2) = 6e-07
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +3

Query: 75  EGTIAFTQEDSNYVAINIKIKGIPQEFHALHIKTYGHISGGIALSEPTFRDLG 233
           +GT++F+ E S    +   + G+P   HAL I TYG+IS     + P F+  G
Sbjct: 14  KGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAG 66


>ref|XP_024039546.1| superoxide dismutase [Cu-Zn] 1-like [Citrus clementina]
          Length = 156

 Score = 43.1 bits (100), Expect(2) = 8e-06
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = +2

Query: 296 ISLRNENSILGRTIVLYSKSNPNPGDPLAWGVIGV 400
           I L   +S++GR +VL+S  +PNPG  +AWGVIG+
Sbjct: 120 IPLAGPDSVIGRGLVLHSNPSPNPGPGVAWGVIGL 154



 Score = 35.4 bits (80), Expect(2) = 8e-06
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 78  GTIAFTQEDSNYVAINIKIKGIPQEFHALHIKTYGHISGGIALSEPTFRDLG 233
           GTI+FTQE +    +   I G+    HAL I TYG+++     +   F+  G
Sbjct: 45  GTISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKPAG 96


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