BLASTX nr result

ID: Acanthopanax21_contig00024411 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00024411
         (444 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004307829.1| PREDICTED: FBD-associated F-box protein At4g...    60   1e-07

>ref|XP_004307829.1| PREDICTED: FBD-associated F-box protein At4g10400-like [Fragaria
           vesca subsp. vesca]
          Length = 455

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 27/62 (43%), Positives = 41/62 (66%)
 Frame = +1

Query: 67  EYFVNFEFIGTQGAPACFFSHLREIRISGFKGLQDEFMLINYLLENVRVLDRMTVNSQDI 246
           +Y + +EF   Q  PAC  SHL+ I I GFKG +DE  +  YLL+N  VL+RM+++++  
Sbjct: 368 KYELQWEFFNPQERPACLVSHLKTISIKGFKGQRDEMEVAEYLLKNGEVLNRMSIHTESE 427

Query: 247 DI 252
           D+
Sbjct: 428 DL 429


Top