BLASTX nr result

ID: Acanthopanax21_contig00023964 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00023964
         (727 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_016486279.1| PREDICTED: ATP-dependent RNA helicase-like p...    62   3e-07
ref|XP_009610912.1| PREDICTED: ATP-dependent RNA helicase-like p...    62   3e-07
ref|XP_019228589.1| PREDICTED: ATP-dependent RNA helicase-like p...    59   2e-06
ref|XP_016437285.1| PREDICTED: ATP-dependent RNA helicase-like p...    59   3e-06
ref|XP_009799735.1| PREDICTED: ATP-dependent RNA helicase-like p...    59   3e-06

>ref|XP_016486279.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10 isoform X1
           [Nicotiana tabacum]
 ref|XP_016486280.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10 isoform X2
           [Nicotiana tabacum]
 ref|XP_016486281.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10 isoform X3
           [Nicotiana tabacum]
 ref|XP_016486282.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10 isoform X2
           [Nicotiana tabacum]
          Length = 750

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 35/90 (38%), Positives = 45/90 (50%)
 Frame = -2

Query: 726 SRDSDRYGHSGNDVDAPGSYHAKSFHESMVRGPEKXXXXXXXXXXXXXGWXXXXXXXXXX 547
           SRDSDRYGH   D DAP S+HA+SFHE+M++  ++             GW          
Sbjct: 594 SRDSDRYGHGSRDTDAPPSFHARSFHETMMQAQQRRGRSRSRSPNKGSGWGDTKSRERSR 653

Query: 546 XXXXXXXXXAPPAREHSPFRSFHEAMMERA 457
                    APP R+    RSFHE+MM R+
Sbjct: 654 SRSAERFDQAPP-RQTPVGRSFHESMMGRS 682


>ref|XP_009610912.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana
           tomentosiformis]
 ref|XP_018629062.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana
           tomentosiformis]
          Length = 750

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 35/90 (38%), Positives = 45/90 (50%)
 Frame = -2

Query: 726 SRDSDRYGHSGNDVDAPGSYHAKSFHESMVRGPEKXXXXXXXXXXXXXGWXXXXXXXXXX 547
           SRDSDRYGH   D DAP S+HA+SFHE+M++  ++             GW          
Sbjct: 594 SRDSDRYGHGSRDTDAPPSFHARSFHETMMQAQQRRGRSRSRSPNKGSGWGDTKSRERSR 653

Query: 546 XXXXXXXXXAPPAREHSPFRSFHEAMMERA 457
                    APP R+    RSFHE+MM R+
Sbjct: 654 SRSAERFDQAPP-RQAPVGRSFHESMMGRS 682


>ref|XP_019228589.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana
           attenuata]
 gb|OIT30633.1| atp-dependent rna helicase-like protein db10 [Nicotiana attenuata]
          Length = 750

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 34/90 (37%), Positives = 44/90 (48%)
 Frame = -2

Query: 726 SRDSDRYGHSGNDVDAPGSYHAKSFHESMVRGPEKXXXXXXXXXXXXXGWXXXXXXXXXX 547
           SRDSD YGH   D DAP S+HA+SFHE+M++  ++             GW          
Sbjct: 594 SRDSDSYGHGSRDTDAPPSFHARSFHETMMQASQRRGRSRSRSPNKGSGWGDTKSRERSR 653

Query: 546 XXXXXXXXXAPPAREHSPFRSFHEAMMERA 457
                    APP R+    RSFHE+MM R+
Sbjct: 654 SRSAERFDQAPP-RQAPVGRSFHESMMGRS 682


>ref|XP_016437285.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana
           tabacum]
          Length = 625

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 34/90 (37%), Positives = 44/90 (48%)
 Frame = -2

Query: 726 SRDSDRYGHSGNDVDAPGSYHAKSFHESMVRGPEKXXXXXXXXXXXXXGWXXXXXXXXXX 547
           SRDSDRYGH   D DAP S+HA+SFHE+M++  ++             GW          
Sbjct: 470 SRDSDRYGHGSRDTDAPPSFHARSFHETMMQASQRRGRSRSRSPNKGSGWGDTKSRERSR 529

Query: 546 XXXXXXXXXAPPAREHSPFRSFHEAMMERA 457
                    AP  R+    RSFHE+MM R+
Sbjct: 530 SRSAERFDQAP--RQAPVGRSFHESMMGRS 557


>ref|XP_009799735.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana
           sylvestris]
 ref|XP_009799736.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana
           sylvestris]
 ref|XP_009799737.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Nicotiana
           sylvestris]
          Length = 749

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 34/90 (37%), Positives = 44/90 (48%)
 Frame = -2

Query: 726 SRDSDRYGHSGNDVDAPGSYHAKSFHESMVRGPEKXXXXXXXXXXXXXGWXXXXXXXXXX 547
           SRDSDRYGH   D DAP S+HA+SFHE+M++  ++             GW          
Sbjct: 594 SRDSDRYGHGSRDTDAPPSFHARSFHETMMQASQRRGRSRSRSPNKGSGWGDTKSRERSR 653

Query: 546 XXXXXXXXXAPPAREHSPFRSFHEAMMERA 457
                    AP  R+    RSFHE+MM R+
Sbjct: 654 SRSAERFDQAP--RQAPVGRSFHESMMGRS 681


Top