BLASTX nr result

ID: Acanthopanax21_contig00023932 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00023932
         (691 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017239686.1| PREDICTED: F-box/kelch-repeat protein At3g23...    65   2e-08
gb|KZN01834.1| hypothetical protein DCAR_010588 [Daucus carota s...    65   2e-08

>ref|XP_017239686.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Daucus carota
           subsp. sativus]
          Length = 396

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 49/147 (33%), Positives = 67/147 (45%), Gaps = 28/147 (19%)
 Frame = +1

Query: 109 GLICLSNGNLAHDSRIYLWSPAIRKSKDSPPVSFVPPRYKIFRXXXXXXXXLALGWFLPP 288
           GLICLS+  L + S IYLW+PAIR  K  PP SF    + +          LA G+   P
Sbjct: 118 GLICLSDLCLDYSSHIYLWNPAIRMLKALPPSSFFSNIFVLDFKGYVYKLSLAFGY--SP 175

Query: 289 KINEYIHCQSL*LILGKYCPMC---------------YGGAVVSC-------------WV 384
            +++Y   + +   + +Y                    GG +  C             WV
Sbjct: 176 HVDDYKVVKVMIYCMEEYAKWLTVVDVYSLRSNSWKRVGGDLSCCKLSRPVFINGAAYWV 235

Query: 385 ARKDYDGFNIMVCFDMENEIIREILVP 465
           A+K + G  I+VCFD ENEI REIL+P
Sbjct: 236 AKKSH-GKKIIVCFDTENEIFREILLP 261


>gb|KZN01834.1| hypothetical protein DCAR_010588 [Daucus carota subsp. sativus]
          Length = 728

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 49/147 (33%), Positives = 67/147 (45%), Gaps = 28/147 (19%)
 Frame = +1

Query: 109 GLICLSNGNLAHDSRIYLWSPAIRKSKDSPPVSFVPPRYKIFRXXXXXXXXLALGWFLPP 288
           GLICLS+  L + S IYLW+PAIR  K  PP SF    + +          LA G+   P
Sbjct: 450 GLICLSDLCLDYSSHIYLWNPAIRMLKALPPSSFFSNIFVLDFKGYVYKLSLAFGY--SP 507

Query: 289 KINEYIHCQSL*LILGKYCPMC---------------YGGAVVSC-------------WV 384
            +++Y   + +   + +Y                    GG +  C             WV
Sbjct: 508 HVDDYKVVKVMIYCMEEYAKWLTVVDVYSLRSNSWKRVGGDLSCCKLSRPVFINGAAYWV 567

Query: 385 ARKDYDGFNIMVCFDMENEIIREILVP 465
           A+K + G  I+VCFD ENEI REIL+P
Sbjct: 568 AKKSH-GKKIIVCFDTENEIFREILLP 593


Top