BLASTX nr result

ID: Acanthopanax21_contig00023877 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00023877
         (858 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017245996.1| PREDICTED: chromatin structure-remodeling co...    78   2e-12
gb|KZM99589.1| hypothetical protein DCAR_013049 [Daucus carota s...    78   2e-12
ref|XP_017245995.1| PREDICTED: chromatin structure-remodeling co...    78   2e-12
ref|XP_017245992.1| PREDICTED: chromatin structure-remodeling co...    78   2e-12
ref|XP_021904872.1| chromatin structure-remodeling complex prote...    69   2e-09
ref|XP_021639151.1| chromatin structure-remodeling complex prote...    67   2e-08
ref|XP_021639149.1| chromatin structure-remodeling complex prote...    67   2e-08
ref|XP_021639146.1| chromatin structure-remodeling complex prote...    67   2e-08
ref|XP_011034242.1| PREDICTED: chromatin structure-remodeling co...    64   1e-07
ref|XP_011034241.1| PREDICTED: chromatin structure-remodeling co...    64   1e-07
ref|XP_011034240.1| PREDICTED: chromatin structure-remodeling co...    64   1e-07
ref|XP_011034239.1| PREDICTED: chromatin structure-remodeling co...    64   1e-07
gb|PNT25661.1| hypothetical protein POPTR_008G195900v3 [Populus ...    64   2e-07
gb|PNT25662.1| hypothetical protein POPTR_008G195900v3 [Populus ...    64   2e-07
gb|PNT25659.1| hypothetical protein POPTR_008G195900v3 [Populus ...    64   2e-07
gb|PNT25664.1| hypothetical protein POPTR_008G195900v3 [Populus ...    64   2e-07
gb|PNT25663.1| hypothetical protein POPTR_008G195900v3 [Populus ...    64   2e-07
gb|PNT25660.1| hypothetical protein POPTR_008G195900v3 [Populus ...    64   2e-07
dbj|GAV63394.1| SNF2_N domain-containing protein/Helicase_C doma...    63   2e-07
ref|XP_011010986.1| PREDICTED: chromatin structure-remodeling co...    63   3e-07

>ref|XP_017245996.1| PREDICTED: chromatin structure-remodeling complex protein SYD
           isoform X3 [Daucus carota subsp. sativus]
          Length = 3131

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 46/82 (56%), Positives = 54/82 (65%)
 Frame = +3

Query: 177 RASHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQV 356
           R  HSRHPEE    + SAHNAL  QQG SLP+ +DVLN+R      K       +EKSQV
Sbjct: 286 RTPHSRHPEEIE--VSSAHNALSRQQGVSLPAANDVLNTRGTWNQTKTNTA---FEKSQV 340

Query: 357 PRFSFHAGGGNSLAETLMHQSA 422
           PRFSF+A  GN  AETL++QSA
Sbjct: 341 PRFSFNASSGNLSAETLLNQSA 362


>gb|KZM99589.1| hypothetical protein DCAR_013049 [Daucus carota subsp. sativus]
          Length = 3568

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 46/82 (56%), Positives = 54/82 (65%)
 Frame = +3

Query: 177 RASHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQV 356
           R  HSRHPEE    + SAHNAL  QQG SLP+ +DVLN+R      K       +EKSQV
Sbjct: 286 RTPHSRHPEEIE--VSSAHNALSRQQGVSLPAANDVLNTRGTWNQTKTNTA---FEKSQV 340

Query: 357 PRFSFHAGGGNSLAETLMHQSA 422
           PRFSF+A  GN  AETL++QSA
Sbjct: 341 PRFSFNASSGNLSAETLLNQSA 362


>ref|XP_017245995.1| PREDICTED: chromatin structure-remodeling complex protein SYD
           isoform X2 [Daucus carota subsp. sativus]
          Length = 3635

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 46/82 (56%), Positives = 54/82 (65%)
 Frame = +3

Query: 177 RASHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQV 356
           R  HSRHPEE    + SAHNAL  QQG SLP+ +DVLN+R      K       +EKSQV
Sbjct: 286 RTPHSRHPEEIE--VSSAHNALSRQQGVSLPAANDVLNTRGTWNQTKTNTA---FEKSQV 340

Query: 357 PRFSFHAGGGNSLAETLMHQSA 422
           PRFSF+A  GN  AETL++QSA
Sbjct: 341 PRFSFNASSGNLSAETLLNQSA 362


>ref|XP_017245992.1| PREDICTED: chromatin structure-remodeling complex protein SYD
           isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017245993.1| PREDICTED: chromatin structure-remodeling complex protein SYD
           isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017245994.1| PREDICTED: chromatin structure-remodeling complex protein SYD
           isoform X1 [Daucus carota subsp. sativus]
          Length = 3638

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 46/82 (56%), Positives = 54/82 (65%)
 Frame = +3

Query: 177 RASHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQV 356
           R  HSRHPEE    + SAHNAL  QQG SLP+ +DVLN+R      K       +EKSQV
Sbjct: 286 RTPHSRHPEEIE--VSSAHNALSRQQGVSLPAANDVLNTRGTWNQTKTNTA---FEKSQV 340

Query: 357 PRFSFHAGGGNSLAETLMHQSA 422
           PRFSF+A  GN  AETL++QSA
Sbjct: 341 PRFSFNASSGNLSAETLLNQSA 362


>ref|XP_021904872.1| chromatin structure-remodeling complex protein SYD-like [Carica
           papaya]
          Length = 1304

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 41/88 (46%), Positives = 59/88 (67%)
 Frame = +3

Query: 177 RASHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQV 356
           R  ++++PEE    + SA+NA G Q GGS+PST+++L+SR      K    GLP E+SQV
Sbjct: 208 RVPNAKYPEEVE--VSSANNASGQQHGGSIPSTYEILSSRNVWNHNKA---GLPLERSQV 262

Query: 357 PRFSFHAGGGNSLAETLMHQSAASSLGS 440
           PRFS +A  GN  A+  + QSA+SS+G+
Sbjct: 263 PRFSSNAVSGNMTADIPIQQSASSSVGA 290


>ref|XP_021639151.1| chromatin structure-remodeling complex protein SYD isoform X3
           [Hevea brasiliensis]
          Length = 3640

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 40/87 (45%), Positives = 53/87 (60%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           ++S  P   +  L S+H + G QQGGSLPS H+ L+SR      K    GLP E+SQVPR
Sbjct: 232 NNSMVPSGGQLELSSSHVSAGQQQGGSLPSPHETLSSRSAWNQNKT---GLPLERSQVPR 288

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGSG 443
           FS ++  GN  AE  + QS  SS+G+G
Sbjct: 289 FSSNSVPGNMTAEIPVQQSMTSSIGAG 315


>ref|XP_021639149.1| chromatin structure-remodeling complex protein SYD isoform X2
           [Hevea brasiliensis]
          Length = 3642

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 40/87 (45%), Positives = 53/87 (60%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           ++S  P   +  L S+H + G QQGGSLPS H+ L+SR      K    GLP E+SQVPR
Sbjct: 232 NNSMVPSGGQLELSSSHVSAGQQQGGSLPSPHETLSSRSAWNQNKT---GLPLERSQVPR 288

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGSG 443
           FS ++  GN  AE  + QS  SS+G+G
Sbjct: 289 FSSNSVPGNMTAEIPVQQSMTSSIGAG 315


>ref|XP_021639146.1| chromatin structure-remodeling complex protein SYD isoform X1
           [Hevea brasiliensis]
 ref|XP_021639147.1| chromatin structure-remodeling complex protein SYD isoform X1
           [Hevea brasiliensis]
 ref|XP_021639148.1| chromatin structure-remodeling complex protein SYD isoform X1
           [Hevea brasiliensis]
          Length = 3646

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 40/87 (45%), Positives = 53/87 (60%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           ++S  P   +  L S+H + G QQGGSLPS H+ L+SR      K    GLP E+SQVPR
Sbjct: 232 NNSMVPSGGQLELSSSHVSAGQQQGGSLPSPHETLSSRSAWNQNKT---GLPLERSQVPR 288

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGSG 443
           FS ++  GN  AE  + QS  SS+G+G
Sbjct: 289 FSSNSVPGNMTAEIPVQQSMTSSIGAG 315


>ref|XP_011034242.1| PREDICTED: chromatin structure-remodeling complex protein SYD-like
           isoform X4 [Populus euphratica]
          Length = 3258

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 40/86 (46%), Positives = 52/86 (60%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           S ++ P   +  + S+  + G QQGGSLPS H+ L SR G +       GLP E+S VPR
Sbjct: 238 SFNKVPNSGQLEVSSSFVSAGQQQGGSLPSAHESLTSR-GMWNQN--KAGLPLERSHVPR 294

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGS 440
           FS +A  GN+ AE  + QSA SSLGS
Sbjct: 295 FSSNAVSGNTTAEIQLQQSAISSLGS 320


>ref|XP_011034241.1| PREDICTED: chromatin structure-remodeling complex protein SYD-like
           isoform X3 [Populus euphratica]
          Length = 3294

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 40/86 (46%), Positives = 52/86 (60%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           S ++ P   +  + S+  + G QQGGSLPS H+ L SR G +       GLP E+S VPR
Sbjct: 238 SFNKVPNSGQLEVSSSFVSAGQQQGGSLPSAHESLTSR-GMWNQN--KAGLPLERSHVPR 294

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGS 440
           FS +A  GN+ AE  + QSA SSLGS
Sbjct: 295 FSSNAVSGNTTAEIQLQQSAISSLGS 320


>ref|XP_011034240.1| PREDICTED: chromatin structure-remodeling complex protein SYD-like
           isoform X2 [Populus euphratica]
          Length = 3297

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 40/86 (46%), Positives = 52/86 (60%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           S ++ P   +  + S+  + G QQGGSLPS H+ L SR G +       GLP E+S VPR
Sbjct: 238 SFNKVPNSGQLEVSSSFVSAGQQQGGSLPSAHESLTSR-GMWNQN--KAGLPLERSHVPR 294

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGS 440
           FS +A  GN+ AE  + QSA SSLGS
Sbjct: 295 FSSNAVSGNTTAEIQLQQSAISSLGS 320


>ref|XP_011034239.1| PREDICTED: chromatin structure-remodeling complex protein SYD-like
           isoform X1 [Populus euphratica]
          Length = 3300

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 40/86 (46%), Positives = 52/86 (60%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           S ++ P   +  + S+  + G QQGGSLPS H+ L SR G +       GLP E+S VPR
Sbjct: 238 SFNKVPNSGQLEVSSSFVSAGQQQGGSLPSAHESLTSR-GMWNQN--KAGLPLERSHVPR 294

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGS 440
           FS +A  GN+ AE  + QSA SSLGS
Sbjct: 295 FSSNAVSGNTTAEIQLQQSAISSLGS 320


>gb|PNT25661.1| hypothetical protein POPTR_008G195900v3 [Populus trichocarpa]
          Length = 2829

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 39/86 (45%), Positives = 52/86 (60%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           S ++ P   +  + S+  + G QQGGSLPS H+ L SR G +       GLP E+S +PR
Sbjct: 238 SFNKVPNSGQLEVSSSFVSAGQQQGGSLPSAHESLTSR-GMWNQN--KAGLPLERSHIPR 294

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGS 440
           FS +A  GN+ AE  + QSA SSLGS
Sbjct: 295 FSSNAVSGNTTAEIQLQQSAISSLGS 320


>gb|PNT25662.1| hypothetical protein POPTR_008G195900v3 [Populus trichocarpa]
          Length = 3441

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 39/86 (45%), Positives = 52/86 (60%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           S ++ P   +  + S+  + G QQGGSLPS H+ L SR G +       GLP E+S +PR
Sbjct: 238 SFNKVPNSGQLEVSSSFVSAGQQQGGSLPSAHESLTSR-GMWNQN--KAGLPLERSHIPR 294

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGS 440
           FS +A  GN+ AE  + QSA SSLGS
Sbjct: 295 FSSNAVSGNTTAEIQLQQSAISSLGS 320


>gb|PNT25659.1| hypothetical protein POPTR_008G195900v3 [Populus trichocarpa]
          Length = 3481

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 39/86 (45%), Positives = 52/86 (60%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           S ++ P   +  + S+  + G QQGGSLPS H+ L SR G +       GLP E+S +PR
Sbjct: 238 SFNKVPNSGQLEVSSSFVSAGQQQGGSLPSAHESLTSR-GMWNQN--KAGLPLERSHIPR 294

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGS 440
           FS +A  GN+ AE  + QSA SSLGS
Sbjct: 295 FSSNAVSGNTTAEIQLQQSAISSLGS 320


>gb|PNT25664.1| hypothetical protein POPTR_008G195900v3 [Populus trichocarpa]
          Length = 3487

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 39/86 (45%), Positives = 52/86 (60%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           S ++ P   +  + S+  + G QQGGSLPS H+ L SR G +       GLP E+S +PR
Sbjct: 238 SFNKVPNSGQLEVSSSFVSAGQQQGGSLPSAHESLTSR-GMWNQN--KAGLPLERSHIPR 294

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGS 440
           FS +A  GN+ AE  + QSA SSLGS
Sbjct: 295 FSSNAVSGNTTAEIQLQQSAISSLGS 320


>gb|PNT25663.1| hypothetical protein POPTR_008G195900v3 [Populus trichocarpa]
          Length = 3487

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 39/86 (45%), Positives = 52/86 (60%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           S ++ P   +  + S+  + G QQGGSLPS H+ L SR G +       GLP E+S +PR
Sbjct: 238 SFNKVPNSGQLEVSSSFVSAGQQQGGSLPSAHESLTSR-GMWNQN--KAGLPLERSHIPR 294

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGS 440
           FS +A  GN+ AE  + QSA SSLGS
Sbjct: 295 FSSNAVSGNTTAEIQLQQSAISSLGS 320


>gb|PNT25660.1| hypothetical protein POPTR_008G195900v3 [Populus trichocarpa]
          Length = 3531

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 39/86 (45%), Positives = 52/86 (60%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           S ++ P   +  + S+  + G QQGGSLPS H+ L SR G +       GLP E+S +PR
Sbjct: 238 SFNKVPNSGQLEVSSSFVSAGQQQGGSLPSAHESLTSR-GMWNQN--KAGLPLERSHIPR 294

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGS 440
           FS +A  GN+ AE  + QSA SSLGS
Sbjct: 295 FSSNAVSGNTTAEIQLQQSAISSLGS 320


>dbj|GAV63394.1| SNF2_N domain-containing protein/Helicase_C domain-containing
           protein [Cephalotus follicularis]
          Length = 3262

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 42/89 (47%), Positives = 52/89 (58%)
 Frame = +3

Query: 174 VRASHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQ 353
           +RA +S+ PEE    + SA NA G QQG S PS  D+L SR G +       GLP+EKSQ
Sbjct: 291 LRAPNSKFPEELE--VSSARNASGQQQGISQPSPQDILPSR-GVWNQN--RAGLPFEKSQ 345

Query: 354 VPRFSFHAGGGNSLAETLMHQSAASSLGS 440
           VPRF  +    N++ E  M QS A  LGS
Sbjct: 346 VPRFPSNVVPNNTMTENPMQQSMAGPLGS 374


>ref|XP_011010986.1| PREDICTED: chromatin structure-remodeling complex protein SYD-like
           isoform X8 [Populus euphratica]
          Length = 3354

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 39/86 (45%), Positives = 53/86 (61%)
 Frame = +3

Query: 183 SHSRHPEEHRSFLCSAHNALGLQQGGSLPSTHDVLNSRPGAYGIKIKLIGLPYEKSQVPR 362
           S ++ P   +  + S++ + G QQGGSL S H+ L SR      K    GLP+E+SQVPR
Sbjct: 233 SFNKVPSSGQLEVSSSYVSAGQQQGGSLSSAHESLTSRCMWNQNKA---GLPHERSQVPR 289

Query: 363 FSFHAGGGNSLAETLMHQSAASSLGS 440
           FS ++  GN+ AE  + QSA SSLGS
Sbjct: 290 FSSNSVSGNATAEIPLQQSAISSLGS 315


Top