BLASTX nr result

ID: Acanthopanax21_contig00023773 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00023773
         (492 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZN08013.1| hypothetical protein DCAR_000682 [Daucus carota s...    64   9e-09
ref|XP_017244284.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    64   9e-09

>gb|KZN08013.1| hypothetical protein DCAR_000682 [Daucus carota subsp. sativus]
          Length = 871

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 58/168 (34%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
 Frame = -3

Query: 490  ASACNLKCQSNGFTKRDLSHPNEGHIGDQEPHFPSDFWEKQIVHSKDDDQMVASQSSESD 311
            AS CN   + N  +  DLS  NE   G   PH  S    KQ   S+D      S+ ++S 
Sbjct: 649  ASVCNYNGKKN--SDPDLSSKNENGTGGGGPHILSGIPRKQTAKSEDG---ATSKVTDSH 703

Query: 310  IPYNGGSSTPSGSCESFDIENDRSLVEEQILLHDGSVISLSTGEVLDEAH-PFTSS-GKL 137
             P    S +     +S D  N  S  E  I + +G   + +T  VL E H  F++S GK 
Sbjct: 704  TPAMRSSDSIDVPLDSLDNGNSSSSGEVSIPVSNGVTFNSTTAGVLTELHFSFSNSDGKP 763

Query: 136  EKVEPGK---GLPSSHSIHDVEGKKGEIKFSESKLKPIFPPGFLGKRP 2
            +K+E  K    LP +  +    GK G  K S S+ KP+  PGFLGK P
Sbjct: 764  KKLEINKDSLALPVNKDV-SAGGKDGR-KHSGSESKPLLRPGFLGKHP 809


>ref|XP_017244284.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 18 [Daucus carota
            subsp. sativus]
          Length = 906

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 58/168 (34%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
 Frame = -3

Query: 490  ASACNLKCQSNGFTKRDLSHPNEGHIGDQEPHFPSDFWEKQIVHSKDDDQMVASQSSESD 311
            AS CN   + N  +  DLS  NE   G   PH  S    KQ   S+D      S+ ++S 
Sbjct: 684  ASVCNYNGKKN--SDPDLSSKNENGTGGGGPHILSGIPRKQTAKSEDG---ATSKVTDSH 738

Query: 310  IPYNGGSSTPSGSCESFDIENDRSLVEEQILLHDGSVISLSTGEVLDEAH-PFTSS-GKL 137
             P    S +     +S D  N  S  E  I + +G   + +T  VL E H  F++S GK 
Sbjct: 739  TPAMRSSDSIDVPLDSLDNGNSSSSGEVSIPVSNGVTFNSTTAGVLTELHFSFSNSDGKP 798

Query: 136  EKVEPGK---GLPSSHSIHDVEGKKGEIKFSESKLKPIFPPGFLGKRP 2
            +K+E  K    LP +  +    GK G  K S S+ KP+  PGFLGK P
Sbjct: 799  KKLEINKDSLALPVNKDV-SAGGKDGR-KHSGSESKPLLRPGFLGKHP 844


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