BLASTX nr result

ID: Acanthopanax21_contig00023749 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00023749
         (524 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO57998.1| Transposon, En/Spm-like protein [Corchorus capsul...    65   5e-09
gb|OMO58327.1| Transposon, En/Spm-like protein [Corchorus capsul...    64   1e-08

>gb|OMO57998.1| Transposon, En/Spm-like protein [Corchorus capsularis]
          Length = 1490

 Score = 65.1 bits (157), Expect = 5e-09
 Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
 Frame = -1

Query: 395  VAVAKPRRSRGVSRGIQAENAPELRPLCLISDNS-FVTEKARNKCGPILKSHIN*PWVLW 219
            +A   PRR RG +RG    + P +R    I D S F   K       ILK + N PW  W
Sbjct: 1094 MAAGIPRRGRGPNRGTATPSNPSMRKQLTILDRSAFSDPKVVTNISSILKGNYNHPWPTW 1153

Query: 218  KQVPEDVFEGCWEEFSACFRFCEGENEKVKEVFRNHYKKLYSKWLSIARREAHKKADTSE 39
             QV + V    W+ F   + +   EN  V++++     +        AR+ A + A T +
Sbjct: 1154 SQVDKRVKYLLWKTFQDLYTWEVHENNLVEDIWDLKCDERLRDGFCKARKRARELARTKD 1213

Query: 38   MCDALKPYNPSW 3
              +ALKP+NP W
Sbjct: 1214 W-NALKPFNPKW 1224


>gb|OMO58327.1| Transposon, En/Spm-like protein [Corchorus capsularis]
          Length = 1506

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
 Frame = -1

Query: 386  AKPRRSRGVSRGIQAENAPELRP-LCLISDNSFVTEKARNKCGPILKSHIN*PWVLWKQV 210
            A  R+ RG SRG    + P ++  L ++  +SF  E      G  L+ H N PW  W Q 
Sbjct: 1121 APKRKGRGPSRGTVTPSDPSMKTRLTILDGSSFAQEGVIANIGSKLREHYNQPWPTWSQF 1180

Query: 209  PEDVFEGCWEEFSACFRFCEGENEKVKEVFRNHYKKLYSKWLSIARREAHKKADTSEMCD 30
             +   +  WE F A + + + +   V +++     +     L  AR +A KK ++++  +
Sbjct: 1181 EKPTKDLLWERFKAIYIWDKDDESLVYKIWNMKCDERLRDGLGKARDQARKKVESNDW-N 1239

Query: 29   ALKPYNPSW 3
             +KP+NP W
Sbjct: 1240 LMKPFNPKW 1248


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