BLASTX nr result

ID: Acanthopanax21_contig00023727 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00023727
         (480 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015080406.1| PREDICTED: cyclin-T1-3-like [Solanum pennell...    57   2e-06
ref|XP_010323565.1| PREDICTED: cyclin-T1-3 [Solanum lycopersicum...    56   5e-06
ref|XP_006367601.1| PREDICTED: cyclin-T1-3-like [Solanum tuberosum]    56   5e-06
gb|KVI04936.1| hypothetical protein Ccrd_016738 [Cynara carduncu...    55   6e-06

>ref|XP_015080406.1| PREDICTED: cyclin-T1-3-like [Solanum pennellii]
 ref|XP_015080407.1| PREDICTED: cyclin-T1-3-like [Solanum pennellii]
          Length = 424

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/39 (69%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
 Frame = -1

Query: 429 PQVLIAIAMMFCHRFYMRQSHAKNCWQVAL---MLLAGN 322
           PQV IA A+M CHRFYMRQSHAKN WQ+     M LAGN
Sbjct: 69  PQVTIATAVMLCHRFYMRQSHAKNHWQIVATVSMFLAGN 107


>ref|XP_010323565.1| PREDICTED: cyclin-T1-3 [Solanum lycopersicum]
 ref|XP_010323567.1| PREDICTED: cyclin-T1-3 [Solanum lycopersicum]
          Length = 413

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 27/38 (71%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
 Frame = -1

Query: 429 PQVLIAIAMMFCHRFYMRQSHAKNCWQVAL---MLLAG 325
           PQV IA AMM CHRFYMRQSHAKN WQ+     M LAG
Sbjct: 58  PQVTIATAMMLCHRFYMRQSHAKNHWQIVATVSMFLAG 95


>ref|XP_006367601.1| PREDICTED: cyclin-T1-3-like [Solanum tuberosum]
          Length = 424

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 27/38 (71%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
 Frame = -1

Query: 429 PQVLIAIAMMFCHRFYMRQSHAKNCWQVAL---MLLAG 325
           PQV IA AMM CHRFYMRQSHAKN WQ+     M LAG
Sbjct: 69  PQVTIATAMMLCHRFYMRQSHAKNHWQIVATVSMFLAG 106


>gb|KVI04936.1| hypothetical protein Ccrd_016738 [Cynara cardunculus var. scolymus]
          Length = 467

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 24/27 (88%), Positives = 24/27 (88%)
 Frame = -1

Query: 429 PQVLIAIAMMFCHRFYMRQSHAKNCWQ 349
           PQV IA AMMFCHRFYMRQSHAKN WQ
Sbjct: 75  PQVTIATAMMFCHRFYMRQSHAKNDWQ 101


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