BLASTX nr result
ID: Acanthopanax21_contig00023652
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00023652
(529 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017224834.1| PREDICTED: putative pentatricopeptide repeat... 75 2e-12
ref|XP_017224081.1| PREDICTED: pentatricopeptide repeat-containi... 74 6e-12
ref|XP_017223738.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-11
ref|XP_017225622.1| PREDICTED: pentatricopeptide repeat-containi... 72 3e-11
ref|XP_017226348.1| PREDICTED: pentatricopeptide repeat-containi... 72 3e-11
ref|XP_017224827.1| PREDICTED: pentatricopeptide repeat-containi... 68 3e-11
ref|XP_017224820.1| PREDICTED: pentatricopeptide repeat-containi... 71 4e-11
ref|XP_017224818.1| PREDICTED: pentatricopeptide repeat-containi... 71 4e-11
ref|XP_017226351.1| PREDICTED: pentatricopeptide repeat-containi... 71 4e-11
ref|XP_017224819.1| PREDICTED: pentatricopeptide repeat-containi... 71 4e-11
ref|XP_017224873.1| PREDICTED: pentatricopeptide repeat-containi... 71 5e-11
ref|XP_017224869.1| PREDICTED: putative pentatricopeptide repeat... 71 5e-11
ref|XP_017226592.1| PREDICTED: pentatricopeptide repeat-containi... 70 9e-11
ref|XP_017224868.1| PREDICTED: putative pentatricopeptide repeat... 70 1e-10
ref|XP_017224838.1| PREDICTED: putative pentatricopeptide repeat... 70 1e-10
ref|XP_017225626.1| PREDICTED: pentatricopeptide repeat-containi... 70 1e-10
ref|XP_017224863.1| PREDICTED: putative pentatricopeptide repeat... 70 1e-10
ref|XP_017224828.1| PREDICTED: uncharacterized protein LOC108201... 70 1e-10
ref|XP_017224755.1| PREDICTED: pentatricopeptide repeat-containi... 69 2e-10
ref|XP_017225400.1| PREDICTED: pentatricopeptide repeat-containi... 69 2e-10
>ref|XP_017224834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Daucus carota subsp. sativus]
Length = 942
Score = 74.7 bits (182), Expect = 2e-12
Identities = 38/76 (50%), Positives = 48/76 (63%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLPI 350
T+IRGCF NK Y+ + ++EMV GF ADA T SML DLL K QDP L AL KF+PI
Sbjct: 560 TLIRGCFKNKMYHGGCVLIDEMVAHGFKADASTASMLFDLLQLKEQDPALLALQKKFMPI 619
Query: 349 SAGLDG*MCDNTMSFD 302
G + NT +++
Sbjct: 620 IFGQNLVNLTNTRTYN 635
Score = 69.3 bits (168), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IRGC NK Y + ++EMV GF ADA+T SML DLL K QDP L AL KF+P
Sbjct: 811 TLIRGCLKNKMYDGGCVLIDEMVAHGFKADAFTASMLFDLLQLKEQDPALLALQKKFMP 869
>ref|XP_017224081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Daucus carota subsp. sativus]
ref|XP_017224082.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Daucus carota subsp. sativus]
Length = 624
Score = 73.6 bits (179), Expect = 6e-12
Identities = 35/59 (59%), Positives = 41/59 (69%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IRGCF NKKY A + ++EM GF ADA TTSML DLL K QDP L A+ KF+P
Sbjct: 566 TLIRGCFKNKKYDGACVLIDEMFAHGFKADASTTSMLFDLLQSKEQDPALLAMKKKFMP 624
>ref|XP_017223738.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Daucus carota subsp. sativus]
ref|XP_017223739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Daucus carota subsp. sativus]
ref|XP_017223740.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Daucus carota subsp. sativus]
Length = 618
Score = 72.4 bits (176), Expect = 1e-11
Identities = 35/59 (59%), Positives = 40/59 (67%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IRGCF NK Y + ++EMV GF ADA TTSML DLL K QDP L AL KF+P
Sbjct: 560 TLIRGCFKNKMYDGGCVLIDEMVAHGFKADASTTSMLFDLLQSKEQDPALLALQKKFMP 618
>ref|XP_017225622.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Daucus carota subsp. sativus]
Length = 621
Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IRGCF NK Y+ + ++EMV GF ADA T SML DLL K QDP L AL KF+P
Sbjct: 563 TLIRGCFKNKMYHGGCVLIDEMVAHGFKADASTASMLFDLLQVKEQDPALLALQKKFMP 621
>ref|XP_017226348.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Daucus carota subsp. sativus]
ref|XP_017226349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Daucus carota subsp. sativus]
Length = 627
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/59 (59%), Positives = 40/59 (67%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IRGCF NK Y A + ++EM GF ADA TTSML DLL K QDP L AL KF+P
Sbjct: 569 TLIRGCFKNKMYDGACVLIDEMCAHGFKADASTTSMLFDLLQSKEQDPALHALQKKFMP 627
>ref|XP_017224827.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Daucus carota subsp. sativus]
Length = 143
Score = 67.8 bits (164), Expect = 3e-11
Identities = 34/59 (57%), Positives = 38/59 (64%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IRGCF NK Y ++EMV GF ADA T SML DLL K QDP L AL KF+P
Sbjct: 85 TLIRGCFKNKMYNGGCELIDEMVAHGFKADASTASMLFDLLQLKEQDPALLALQKKFMP 143
>ref|XP_017224820.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63080,
mitochondrial-like [Daucus carota subsp. sativus]
Length = 554
Score = 71.2 bits (173), Expect = 4e-11
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IRGCF NK Y A + ++EM GF ADA TTSML DLL K QDP L A+ KF+P
Sbjct: 496 TLIRGCFKNKMYDGACVLIDEMCAHGFKADASTTSMLFDLLQSKEQDPALLAMQKKFMP 554
>ref|XP_017224818.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Daucus carota subsp. sativus]
Length = 606
Score = 71.2 bits (173), Expect = 4e-11
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IRGCF NK Y A + ++EM GF ADA TTSML DLL K QDP L A+ KF+P
Sbjct: 548 TLIRGCFKNKMYDGACVLIDEMCAHGFKADASTTSMLFDLLQSKEQDPALLAMQKKFMP 606
>ref|XP_017226351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Daucus carota subsp. sativus]
Length = 624
Score = 71.2 bits (173), Expect = 4e-11
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IRGCF NK Y A + ++EM GF ADA TTSML DLL K QDP L A+ KF+P
Sbjct: 566 TLIRGCFKNKMYDGACVLIDEMCAHGFKADASTTSMLFDLLQSKEQDPALLAMQKKFMP 624
>ref|XP_017224819.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Daucus carota subsp. sativus]
Length = 1191
Score = 71.2 bits (173), Expect = 4e-11
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IRGCF NK Y A + ++EM GF ADA TTSML DLL K QDP L A+ KF+P
Sbjct: 1133 TLIRGCFKNKMYDGACVLIDEMCAHGFKADASTTSMLFDLLQSKEQDPALLAMQKKFMP 1191
Score = 69.3 bits (168), Expect = 2e-10
Identities = 35/61 (57%), Positives = 40/61 (65%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLPI 350
T+IRGCF NK Y A ++EM GF ADA TTSML DLL K QDP L A+ KF+P
Sbjct: 471 TLIRGCFKNKMYDGACELIDEMCAHGFKADASTTSMLFDLLQSKEQDPALLAMQKKFMPN 530
Query: 349 S 347
S
Sbjct: 531 S 531
>ref|XP_017224873.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like isoform X2 [Daucus carota subsp.
sativus]
Length = 469
Score = 70.9 bits (172), Expect = 5e-11
Identities = 37/71 (52%), Positives = 45/71 (63%)
Frame = -1
Query: 526 IIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLPIS 347
+IRGC NKKYY+A +FL+EM+ F+ADA T S LVDLL + DP L AL K+ PI
Sbjct: 399 LIRGCLHNKKYYEAGVFLDEMLGHSFAADASTASALVDLLEVQEPDPPLLALRDKYSPIH 458
Query: 346 AGLDG*MCDNT 314
L G C T
Sbjct: 459 KCLKGRECPGT 469
>ref|XP_017224869.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial isoform X1 [Daucus carota
subsp. sativus]
ref|XP_017224870.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial isoform X1 [Daucus carota
subsp. sativus]
ref|XP_017224871.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial isoform X1 [Daucus carota
subsp. sativus]
ref|XP_017224872.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial isoform X1 [Daucus carota
subsp. sativus]
Length = 626
Score = 70.9 bits (172), Expect = 5e-11
Identities = 37/71 (52%), Positives = 45/71 (63%)
Frame = -1
Query: 526 IIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLPIS 347
+IRGC NKKYY+A +FL+EM+ F+ADA T S LVDLL + DP L AL K+ PI
Sbjct: 556 LIRGCLHNKKYYEAGVFLDEMLGHSFAADASTASALVDLLEVQEPDPPLLALRDKYSPIH 615
Query: 346 AGLDG*MCDNT 314
L G C T
Sbjct: 616 KCLKGRECPGT 626
>ref|XP_017226592.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Daucus carota subsp. sativus]
ref|XP_017226593.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like [Daucus carota subsp. sativus]
Length = 614
Score = 70.1 bits (170), Expect = 9e-11
Identities = 35/59 (59%), Positives = 39/59 (66%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IRGCF NK Y F++EMV GF ADA T SML DLL K QDP L AL KF+P
Sbjct: 556 TLIRGCFKNKMYNGGCEFIDEMVAHGFKADASTASMLFDLLQLKEQDPALLALQKKFMP 614
>ref|XP_017224868.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial isoform X2 [Daucus carota
subsp. sativus]
Length = 551
Score = 69.7 bits (169), Expect = 1e-10
Identities = 36/73 (49%), Positives = 46/73 (63%)
Frame = -1
Query: 526 IIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLPIS 347
+IRGC NKKYY+A +FL+EM+ F+ADA T S L+DLL + DP L AL K+ PI
Sbjct: 474 LIRGCLQNKKYYEAGVFLDEMLGHSFAADASTASALLDLLEVQEPDPPLLALRDKYSPIL 533
Query: 346 AGLDG*MCDNTMS 308
L G C +S
Sbjct: 534 KCLKGRECPGILS 546
>ref|XP_017224838.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Daucus carota subsp. sativus]
Length = 615
Score = 69.7 bits (169), Expect = 1e-10
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = -1
Query: 526 IIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
+IRGC NKKYY+A + L+EM+ RGF+ DA T S+L+DLL + Q P L AL+ K+LP
Sbjct: 558 LIRGCLQNKKYYEAGVLLDEMLGRGFATDASTASLLLDLLDVQEQHPALLALWKKYLP 615
>ref|XP_017225626.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g63330-like isoform X1 [Daucus carota subsp. sativus]
Length = 616
Score = 69.7 bits (169), Expect = 1e-10
Identities = 34/59 (57%), Positives = 39/59 (66%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IRGCF NK Y + ++EMV GF ADA T SML DLL K QDP L AL KF+P
Sbjct: 558 TLIRGCFKNKMYDGGCVLIDEMVAHGFKADASTASMLFDLLQLKEQDPALLALQKKFMP 616
>ref|XP_017224863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial isoform X1 [Daucus carota
subsp. sativus]
ref|XP_017224864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial isoform X1 [Daucus carota
subsp. sativus]
ref|XP_017224865.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial isoform X1 [Daucus carota
subsp. sativus]
ref|XP_017224866.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial isoform X1 [Daucus carota
subsp. sativus]
ref|XP_017224867.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial isoform X1 [Daucus carota
subsp. sativus]
Length = 633
Score = 69.7 bits (169), Expect = 1e-10
Identities = 36/73 (49%), Positives = 46/73 (63%)
Frame = -1
Query: 526 IIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLPIS 347
+IRGC NKKYY+A +FL+EM+ F+ADA T S L+DLL + DP L AL K+ PI
Sbjct: 556 LIRGCLQNKKYYEAGVFLDEMLGHSFAADASTASALLDLLEVQEPDPPLLALRDKYSPIL 615
Query: 346 AGLDG*MCDNTMS 308
L G C +S
Sbjct: 616 KCLKGRECPGILS 628
>ref|XP_017224828.1| PREDICTED: uncharacterized protein LOC108201053 [Daucus carota subsp.
sativus]
Length = 1532
Score = 69.7 bits (169), Expect = 1e-10
Identities = 34/59 (57%), Positives = 39/59 (66%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IRGCF NK Y + ++EMV GF ADA T SML DLL K QDP L AL KF+P
Sbjct: 1474 TLIRGCFKNKMYDGGCVLIDEMVAHGFKADASTASMLFDLLQLKEQDPALLALQKKFMP 1532
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/57 (50%), Positives = 37/57 (64%)
Frame = -1
Query: 526 IIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFL 356
+IRGCF NK Y + +++MV GF ADA T S++ DLL K QDP L AL KF+
Sbjct: 569 LIRGCFKNKMYDGGCLLIDDMVAHGFKADASTASIVFDLLQLKDQDPALLALQKKFI 625
>ref|XP_017224755.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Daucus carota subsp. sativus]
Length = 1099
Score = 69.3 bits (168), Expect = 2e-10
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = -1
Query: 526 IIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLPIS 347
+IRGC NK YY+A + L+EM+ RGF+ADA T S+ VDLL + QDP L +L K+LP
Sbjct: 558 LIRGCLQNKNYYEAGVLLDEMLGRGFAADASTASVFVDLLDVQEQDPALLSLCKKYLPYR 617
Query: 346 AGL 338
L
Sbjct: 618 MSL 620
Score = 67.0 bits (162), Expect = 1e-09
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = -1
Query: 526 IIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
+IRGC NK YY+A + ++EM+ RGF+ADA T S+L+DLL + QDP AL K+LP
Sbjct: 1042 LIRGCLQNKNYYEAGVLMDEMLGRGFAADASTASVLLDLLDVQEQDPAPLALCKKYLP 1099
>ref|XP_017225400.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Daucus carota subsp. sativus]
Length = 498
Score = 68.9 bits (167), Expect = 2e-10
Identities = 33/59 (55%), Positives = 39/59 (66%)
Frame = -1
Query: 529 TIIRGCFLNKKYYKATIFLEEMVCRGFSADAYTTSMLVDLLSKKGQDPTLFALFPKFLP 353
T+IR CF NK Y + ++EM+ GF ADA TTSML DLL K QDP L AL KF+P
Sbjct: 440 TLIRSCFKNKMYDGGCVLIDEMIAHGFKADASTTSMLFDLLQLKEQDPALLALQKKFMP 498