BLASTX nr result

ID: Acanthopanax21_contig00021511 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00021511
         (455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017222698.1| PREDICTED: protein SCAR2 isoform X2 [Daucus ...   100   2e-21
ref|XP_017222697.1| PREDICTED: protein SCAR2 isoform X1 [Daucus ...   100   2e-21
ref|XP_017218781.1| PREDICTED: protein SCAR4 isoform X3 [Daucus ...    92   8e-19
ref|XP_017218780.1| PREDICTED: protein SCAR4 isoform X2 [Daucus ...    92   8e-19
ref|XP_017218779.1| PREDICTED: protein SCAR4 isoform X1 [Daucus ...    92   8e-19

>ref|XP_017222698.1| PREDICTED: protein SCAR2 isoform X2 [Daucus carota subsp. sativus]
 gb|KZM83683.1| hypothetical protein DCAR_028895 [Daucus carota subsp. sativus]
          Length = 1509

 Score =  100 bits (248), Expect = 2e-21
 Identities = 63/154 (40%), Positives = 83/154 (53%), Gaps = 4/154 (2%)
 Frame = -3

Query: 453  KLVIQADQLDIGQLHADETKSKEISQSEQLQSPDHMEEGSIDGHSEPCLVANESGVQVDI 274
            KL +Q+DQ D+  LH D +  KE+SQSEQ    DH +EGS +  SEPCL A+   VQ +I
Sbjct: 993  KLTLQSDQNDLEHLHLDNSNPKEVSQSEQSCCLDHPDEGSTESQSEPCLAASMPVVQANI 1052

Query: 273  QADCLDLKSLHGDETSFESSSQLKQMQFTNHTDHESVINASPKS----FPIEDSESELSQ 106
            QAD   ++SL GD+  +  SS+L      N  D       SPKS     P E   S++SQ
Sbjct: 1053 QADSFGIESLSGDKEIYSPSSKL----HLNDADRGGSFITSPKSSLIFSPTEAMNSDISQ 1108

Query: 105  PGSHKVGISEQARDXXXXXXXXXXXXPAVPQINL 4
            P +++V I   A D            PAVPQI+L
Sbjct: 1109 PENNEVDIPAHASDEASEVSSSYPLLPAVPQIDL 1142


>ref|XP_017222697.1| PREDICTED: protein SCAR2 isoform X1 [Daucus carota subsp. sativus]
          Length = 1510

 Score =  100 bits (248), Expect = 2e-21
 Identities = 63/154 (40%), Positives = 83/154 (53%), Gaps = 4/154 (2%)
 Frame = -3

Query: 453  KLVIQADQLDIGQLHADETKSKEISQSEQLQSPDHMEEGSIDGHSEPCLVANESGVQVDI 274
            KL +Q+DQ D+  LH D +  KE+SQSEQ    DH +EGS +  SEPCL A+   VQ +I
Sbjct: 994  KLTLQSDQNDLEHLHLDNSNPKEVSQSEQSCCLDHPDEGSTESQSEPCLAASMPVVQANI 1053

Query: 273  QADCLDLKSLHGDETSFESSSQLKQMQFTNHTDHESVINASPKS----FPIEDSESELSQ 106
            QAD   ++SL GD+  +  SS+L      N  D       SPKS     P E   S++SQ
Sbjct: 1054 QADSFGIESLSGDKEIYSPSSKL----HLNDADRGGSFITSPKSSLIFSPTEAMNSDISQ 1109

Query: 105  PGSHKVGISEQARDXXXXXXXXXXXXPAVPQINL 4
            P +++V I   A D            PAVPQI+L
Sbjct: 1110 PENNEVDIPAHASDEASEVSSSYPLLPAVPQIDL 1143


>ref|XP_017218781.1| PREDICTED: protein SCAR4 isoform X3 [Daucus carota subsp. sativus]
          Length = 1391

 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
 Frame = -3

Query: 453  KLVIQADQLDIGQLHADETKSKEISQSEQLQSPDHMEEGSIDGHSEPCLVANESGVQVDI 274
            +L +Q D+ D   LH DE+K  ++SQ E+L S  +++EGS D H EP  VA++S V V+ 
Sbjct: 944  ELTLQTDEFDTEHLHVDESKPNKVSQLEELSSSKNLDEGSSDAHFEPYFVASKSVVPVN- 1002

Query: 273  QADCLDLKSLHGDETSFESSSQLKQMQFTNHTDH--ESVINASPKSFPIEDSESELSQPG 100
             +D L ++SL+GD+ SF SSS+L     +NH D+    + +ASP    +    SELS+ G
Sbjct: 1003 -SDSLAVESLYGDKASFGSSSKLD----SNHADYVGNLITSASPS---LVTPISELSRQG 1054

Query: 99   SHKVGISEQARDXXXXXXXXXXXXPAVPQINL 4
              +V IS +ARD            P +PQ++L
Sbjct: 1055 GQEVNISVEARDELSAVHPGILPLPELPQVSL 1086


>ref|XP_017218780.1| PREDICTED: protein SCAR4 isoform X2 [Daucus carota subsp. sativus]
 gb|KZM86855.1| hypothetical protein DCAR_023989 [Daucus carota subsp. sativus]
          Length = 1457

 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
 Frame = -3

Query: 453  KLVIQADQLDIGQLHADETKSKEISQSEQLQSPDHMEEGSIDGHSEPCLVANESGVQVDI 274
            +L +Q D+ D   LH DE+K  ++SQ E+L S  +++EGS D H EP  VA++S V V+ 
Sbjct: 1010 ELTLQTDEFDTEHLHVDESKPNKVSQLEELSSSKNLDEGSSDAHFEPYFVASKSVVPVN- 1068

Query: 273  QADCLDLKSLHGDETSFESSSQLKQMQFTNHTDH--ESVINASPKSFPIEDSESELSQPG 100
             +D L ++SL+GD+ SF SSS+L     +NH D+    + +ASP    +    SELS+ G
Sbjct: 1069 -SDSLAVESLYGDKASFGSSSKLD----SNHADYVGNLITSASPS---LVTPISELSRQG 1120

Query: 99   SHKVGISEQARDXXXXXXXXXXXXPAVPQINL 4
              +V IS +ARD            P +PQ++L
Sbjct: 1121 GQEVNISVEARDELSAVHPGILPLPELPQVSL 1152


>ref|XP_017218779.1| PREDICTED: protein SCAR4 isoform X1 [Daucus carota subsp. sativus]
          Length = 1458

 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
 Frame = -3

Query: 453  KLVIQADQLDIGQLHADETKSKEISQSEQLQSPDHMEEGSIDGHSEPCLVANESGVQVDI 274
            +L +Q D+ D   LH DE+K  ++SQ E+L S  +++EGS D H EP  VA++S V V+ 
Sbjct: 1011 ELTLQTDEFDTEHLHVDESKPNKVSQLEELSSSKNLDEGSSDAHFEPYFVASKSVVPVN- 1069

Query: 273  QADCLDLKSLHGDETSFESSSQLKQMQFTNHTDH--ESVINASPKSFPIEDSESELSQPG 100
             +D L ++SL+GD+ SF SSS+L     +NH D+    + +ASP    +    SELS+ G
Sbjct: 1070 -SDSLAVESLYGDKASFGSSSKLD----SNHADYVGNLITSASPS---LVTPISELSRQG 1121

Query: 99   SHKVGISEQARDXXXXXXXXXXXXPAVPQINL 4
              +V IS +ARD            P +PQ++L
Sbjct: 1122 GQEVNISVEARDELSAVHPGILPLPELPQVSL 1153


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