BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00021443
         (976 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD91515.1| RNA polymerase II second largest subunit, partia...   472   e-162
gb|AJS14101.1| RNA polymerase II second largest subunit, partial...   459   e-160
emb|CAD91516.1| RNA polymerase II second largest subunit, partia...   465   e-159
gb|AAS86833.1| RNA polymerase II second largest subunit, partial...   462   e-158
gb|AJS14098.1| RNA polymerase II second largest subunit, partial...   452   e-158
emb|CAD88602.1| RNA polymerase II second largest subunit, partia...   461   e-157
emb|CAD92661.1| RNA polymerase II, partial [Lonicera sp. Oxelman...   453   e-157
emb|CAD89519.1| RNA polymerase II second largest subunit, partia...   455   e-157
emb|CAD89691.1| RNA polymerase II, second largest subunit, parti...   459   e-157
gb|AAS86826.1| RNA polymerase II second largest subunit, partial...   461   e-157
gb|AJS14121.1| RNA polymerase II second largest subunit, partial...   453   e-157
emb|CAD92460.1| RNA polymerase II, partial [Escallonia sp. Oxelm...   459   e-157
gb|AAW22927.1| RNA polymerase II second largest subunit, partial...   458   e-156
gb|AJS14106.1| RNA polymerase II second largest subunit, partial...   449   e-156
gb|AAS86834.1| RNA polymerase II second largest subunit, partial...   457   e-156
gb|AAS86830.1| RPB140, partial [Liquidambar acalycina]                456   e-156
gb|AJS14100.1| RNA polymerase II second largest subunit, partial...   451   e-156
gb|AFV74909.1| RNA polymerase II second largest subunit, partial...   456   e-155
emb|CAD98811.2| RNA polymerase II, second largest subunit, parti...   454   e-155
gb|AAY85202.1| RNA polymerase II second largest subunit, partial...   458   e-155

>emb|CAD91515.1| RNA polymerase II second largest subunit, partial [Hedera helix]
          Length = 541

 Score =  472 bits (1215), Expect = e-162
 Identities = 232/252 (92%), Positives = 234/252 (92%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIV+NQRLLIRKKDIQALQQRESPEDGGWHDLVAKGF     
Sbjct: 95  RLKELRIYTDYGRCSRPLFIVKNQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFIEYID 154

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 155 TEEEETTMISMTINDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 214

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 215 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 274

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH
Sbjct: 275 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 334

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 335 GSYDKLDDDGLA 346



 Score =  106 bits (264), Expect = 9e-22
 Identities = 52/54 (96%), Positives = 52/54 (96%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRS RIP IGDKFSSRHG
Sbjct: 378 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSXRIPXIGDKFSSRHG 431


>gb|AJS14101.1| RNA polymerase II second largest subunit, partial [Comandra
           umbellata]
          Length = 298

 Score =  459 bits (1180), Expect = e-160
 Identities = 223/252 (88%), Positives = 232/252 (92%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKDIQALQQRE+PEDGGWHDLVAKGF     
Sbjct: 26  RLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPEDGGWHDLVAKGFIEYID 85

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL+SARVNPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 86  TEEEETTMISMTINDLVSARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 145

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 146 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 205

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRH
Sbjct: 206 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRMDTMGMRH 265

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 266 GSYDKLDDDGLA 277


>emb|CAD91516.1| RNA polymerase II second largest subunit, partial [Garrya
           elliptica]
          Length = 576

 Score =  465 bits (1196), Expect = e-159
 Identities = 226/252 (89%), Positives = 233/252 (92%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKDIQALQQRESPEDGGWHDLVAKGF     
Sbjct: 90  RLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPEDGGWHDLVAKGFIEYID 149

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDLLSA++NPE+AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 150 TEEEETTMISMTINDLLSAKLNPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 209

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 210 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 269

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH
Sbjct: 270 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 329

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 330 GSYDKLDDDGLA 341



 Score =  109 bits (272), Expect = 9e-23
 Identities = 53/54 (98%), Positives = 54/54 (100%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           YT+RDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 372 YTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 425


>gb|AAS86833.1| RNA polymerase II second largest subunit, partial [Rhododendron
           macrophyllum]
          Length = 549

 Score =  462 bits (1189), Expect = e-158
 Identities = 224/252 (88%), Positives = 233/252 (92%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI++KDIQALQQRE+PEDGGWHDLVAKGF     
Sbjct: 95  RLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYID 154

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL+SAR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 155 TEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 214

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 215 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 274

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH
Sbjct: 275 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 334

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 335 GSYDKLDDDGLA 346



 Score =  110 bits (275), Expect = 3e-23
 Identities = 54/54 (100%), Positives = 54/54 (100%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 377 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 430


>gb|AJS14098.1| RNA polymerase II second largest subunit, partial [Anacolosa
           frutescens]
          Length = 295

 Score =  452 bits (1163), Expect = e-158
 Identities = 220/252 (87%), Positives = 230/252 (91%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKDIQALQQRES E+GGWHDLVAKGF     
Sbjct: 6   RLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESTEEGGWHDLVAKGFIEYID 65

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL+SAR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 66  TEEEETTMISMTINDLISARINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 125

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHL FRQLPAGINAIVAI
Sbjct: 126 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLDFRQLPAGINAIVAI 185

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRH
Sbjct: 186 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRTDTMGMRH 245

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 246 GSYDKLDDDGLA 257


>emb|CAD88602.1| RNA polymerase II second largest subunit, partial [Alangium
           platanifolium]
          Length = 540

 Score =  461 bits (1185), Expect = e-157
 Identities = 223/252 (88%), Positives = 232/252 (92%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKDIQ LQQRE+PE+GGWHDLVAKGF     
Sbjct: 95  RLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQMLQQRETPEEGGWHDLVAKGFIEYID 154

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL+SAR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 155 TEEEETTMISMTINDLVSARINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 214

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 215 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 274

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH
Sbjct: 275 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 334

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 335 GSYDKLDDDGLA 346



 Score =  107 bits (267), Expect = 4e-22
 Identities = 52/54 (96%), Positives = 54/54 (100%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           Y+RRDHSTSLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 377 YSRRDHSTSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 430


>emb|CAD92661.1| RNA polymerase II, partial [Lonicera sp. Oxelman 2331]
          Length = 349

 Score =  453 bits (1166), Expect = e-157
 Identities = 222/252 (88%), Positives = 228/252 (90%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKDIQALQ RESPED GW DLV KGF     
Sbjct: 96  RLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQTRESPEDAGWRDLVEKGFIEYID 155

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL+SAR NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 156 TEEEETTMISMTINDLVSARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 215

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 216 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 275

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           +CYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH
Sbjct: 276 SCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 335

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 336 GSYDKLDDDGLA 347


>emb|CAD89519.1| RNA polymerase II second largest subunit, partial [Davidia
           involucrata]
          Length = 396

 Score =  455 bits (1170), Expect = e-157
 Identities = 220/252 (87%), Positives = 231/252 (91%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKDIQ LQQR++PE+ GWHDLVAKGF     
Sbjct: 95  RLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRKTPEEVGWHDLVAKGFIEYID 154

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL+SAR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 155 TEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 214

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 215 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 274

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSS+DRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH
Sbjct: 275 ACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 334

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 335 GSYDKLDDDGLA 346


>emb|CAD89691.1| RNA polymerase II, second largest subunit, partial [Escallonia sp.
           Oxelman 2340]
          Length = 508

 Score =  459 bits (1180), Expect = e-157
 Identities = 222/252 (88%), Positives = 231/252 (91%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIV  QRLLI+K DIQALQQRE+PEDGGWHDLVAKG+     
Sbjct: 32  RLKELRIYTDYGRCSRPLFIVNKQRLLIKKADIQALQQRETPEDGGWHDLVAKGYIEYID 91

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL+SAR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 92  TEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 151

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 152 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 211

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSS+DRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH
Sbjct: 212 ACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 271

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 272 GSYDKLDDDGLA 283



 Score =  107 bits (268), Expect = 2e-22
 Identities = 52/54 (96%), Positives = 54/54 (100%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           Y++RDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 314 YSKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 367


>gb|AAS86826.1| RNA polymerase II second largest subunit, partial [Antirrhinum
           majus]
          Length = 575

 Score =  461 bits (1185), Expect = e-157
 Identities = 223/252 (88%), Positives = 232/252 (92%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKD+QALQQRESP+DGGWH+LVAKGF     
Sbjct: 95  RLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDVQALQQRESPDDGGWHELVAKGFIEYID 154

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDLLSA+VNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 155 TEEEETTMISMTINDLLSAKVNPTEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 214

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 215 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 274

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRH
Sbjct: 275 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRH 334

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 335 GSYDKLDDDGLA 346



 Score =  109 bits (272), Expect = 9e-23
 Identities = 53/54 (98%), Positives = 54/54 (100%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           YT+RDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 377 YTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 430


>gb|AJS14121.1| RNA polymerase II second largest subunit, partial [Octoknema sp.
           Nickrent 4560]
          Length = 389

 Score =  453 bits (1166), Expect = e-157
 Identities = 220/252 (87%), Positives = 231/252 (91%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKDIQALQQRE+ E+GGWHDLVAKGF     
Sbjct: 6   RLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETAEEGGWHDLVAKGFIEYID 65

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL+SAR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 66  TEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 125

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 126 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 185

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRH
Sbjct: 186 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRTDTMGMRH 245

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 246 GSYDKLDDDGLA 257



 Score =  107 bits (268), Expect = 8e-23
 Identities = 52/54 (96%), Positives = 54/54 (100%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           YT+RDHSTSLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 288 YTKRDHSTSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 341


>emb|CAD92460.1| RNA polymerase II, partial [Escallonia sp. Oxelman 2340]
          Length = 543

 Score =  459 bits (1180), Expect = e-157
 Identities = 222/252 (88%), Positives = 231/252 (91%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIV  QRLLI+K DIQALQQRE+PEDGGWHDLVAKG+     
Sbjct: 89  RLKELRIYTDYGRCSRPLFIVNKQRLLIKKADIQALQQRETPEDGGWHDLVAKGYIEYID 148

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL+SAR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 149 TEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 208

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 209 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 268

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSS+DRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH
Sbjct: 269 ACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 328

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 329 GSYDKLDDDGLA 340



 Score =  107 bits (268), Expect = 3e-22
 Identities = 52/54 (96%), Positives = 54/54 (100%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           Y++RDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 371 YSKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 424


>gb|AAW22927.1| RNA polymerase II second largest subunit, partial [Dianthus sp.
           UWG]
          Length = 540

 Score =  458 bits (1179), Expect = e-156
 Identities = 222/252 (88%), Positives = 232/252 (92%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKDI+ALQQRE+PEDGGWHDLVAKGF     
Sbjct: 95  RLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRETPEDGGWHDLVAKGFIEYID 154

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL+SAR+NPEE+YS TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 155 TEEEETTMISMTINDLVSARLNPEESYSGTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 214

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 215 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 274

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRH
Sbjct: 275 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRH 334

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 335 GSYDKLDDDGLA 346



 Score =  102 bits (254), Expect = 2e-20
 Identities = 49/54 (90%), Positives = 53/54 (98%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           Y+R+DHS SLRHSE+G+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 377 YSRKDHSISLRHSESGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 430


>gb|AJS14106.1| RNA polymerase II second largest subunit, partial [Dulacia candida]
          Length = 306

 Score =  449 bits (1156), Expect = e-156
 Identities = 218/252 (86%), Positives = 230/252 (91%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKDIQALQQRES E+GGWHDLVAKGF     
Sbjct: 6   RLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESAEEGGWHDLVAKGFIEYID 65

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL++AR+NPEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 66  TEEEETTMISMTINDLVTARINPEEAYTETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 125

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 126 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 185

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRH
Sbjct: 186 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRTDTMGMRH 245

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDD LA
Sbjct: 246 GSYDKLDDDCLA 257


>gb|AAS86834.1| RNA polymerase II second largest subunit, partial [Camellia
           japonica]
          Length = 559

 Score =  457 bits (1176), Expect = e-156
 Identities = 221/252 (87%), Positives = 232/252 (92%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKDIQ+LQQRE+PEDGGWHDLVAKG+     
Sbjct: 114 RLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQSLQQRETPEDGGWHDLVAKGYIEYID 173

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL++AR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 174 TEEEETTMISMTINDLITARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 233

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 234 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 293

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFG PDRANTMGMRH
Sbjct: 294 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGCPDRANTMGMRH 353

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 354 GSYDKLDDDGLA 365



 Score =  109 bits (272), Expect = 8e-23
 Identities = 53/54 (98%), Positives = 54/54 (100%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           YT+RDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 396 YTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 449


>gb|AAS86830.1| RPB140, partial [Liquidambar acalycina]
          Length = 540

 Score =  456 bits (1174), Expect = e-156
 Identities = 220/252 (87%), Positives = 233/252 (92%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKDIQALQQRE+P+DGGWHDLVAKGF     
Sbjct: 95  RLKELRIYTDYGRCSRPLFIVERQRLLIKKKDIQALQQRETPDDGGWHDLVAKGFIEYVD 154

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL+SAR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 155 TEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 214

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 215 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 274

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSS+DRGFFRS+FFRSYRDEEKKMGTLVKEDFGRP+RA+TMGMRH
Sbjct: 275 ACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRADTMGMRH 334

Query: 738 GSYDKLDDDGLA 773
           GSY+KLDDDGLA
Sbjct: 335 GSYEKLDDDGLA 346



 Score =  110 bits (275), Expect = 3e-23
 Identities = 54/54 (100%), Positives = 54/54 (100%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 377 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 430


>gb|AJS14100.1| RNA polymerase II second largest subunit, partial [Cervantesia
           tomentosa]
          Length = 391

 Score =  451 bits (1159), Expect = e-156
 Identities = 219/251 (87%), Positives = 229/251 (91%)
 Frame = +3

Query: 21  VKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXXX 200
           +KELRIYTDYGRCSRPLFIVE QRLLI+KKDIQ LQQRE+ EDGGWHDLVAKGF      
Sbjct: 27  LKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQILQQRETAEDGGWHDLVAKGFIEYIDT 86

Query: 201 XXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 380
                       NDL+SAR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 87  EEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 146

Query: 381 YQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 560
           YQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA
Sbjct: 147 YQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIA 206

Query: 561 CYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHG 740
           CYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRHG
Sbjct: 207 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRMDTMGMRHG 266

Query: 741 SYDKLDDDGLA 773
           SYDKLDDDGLA
Sbjct: 267 SYDKLDDDGLA 277



 Score =  107 bits (267), Expect = 1e-22
 Identities = 51/54 (94%), Positives = 54/54 (100%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           YT+RDHSTSLRHSETG+VDQVLLTTNADGLRFVKVRVRS+RIPQIGDKFSSRHG
Sbjct: 308 YTKRDHSTSLRHSETGIVDQVLLTTNADGLRFVKVRVRSIRIPQIGDKFSSRHG 361


>gb|AFV74909.1| RNA polymerase II second largest subunit, partial [Balanophora
           laxiflora]
          Length = 569

 Score =  456 bits (1174), Expect = e-155
 Identities = 220/252 (87%), Positives = 232/252 (92%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE +RLLI+KKDIQALQQRESP++GGWHDLVAKGF     
Sbjct: 89  RLKELRIYTDYGRCSRPLFIVEKKRLLIKKKDIQALQQRESPDEGGWHDLVAKGFIEYID 148

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL+S R+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 149 TEEEETTMISMTINDLVSGRINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRN 208

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+Q+RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 209 TYQSAMGKQAMGIYVTNYQYRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 268

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDRA+TMGMRH
Sbjct: 269 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRADTMGMRH 328

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 329 GSYDKLDDDGLA 340



 Score =  107 bits (267), Expect = 4e-22
 Identities = 52/54 (96%), Positives = 54/54 (100%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           YTR+DHSTSLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 371 YTRQDHSTSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 424


>emb|CAD98811.2| RNA polymerase II, second largest subunit, partial [Gardenia sp.
           Oxelman 2319]
          Length = 545

 Score =  454 bits (1168), Expect = e-155
 Identities = 220/252 (87%), Positives = 231/252 (91%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKDIQALQ RESP++ GWHDLVA+GF     
Sbjct: 94  RLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQARESPDECGWHDLVARGFIEYID 153

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL++AR+NPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 154 TEEEETTMISMTINDLVTARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 213

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 214 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 273

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRH
Sbjct: 274 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRH 333

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 334 GSYDKLDDDGLA 345



 Score =  107 bits (267), Expect = 4e-22
 Identities = 51/54 (94%), Positives = 54/54 (100%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           YT+RDHSTSLRHSETG+VDQVLLTTNADGLRFVKVRVRSVR+PQIGDKFSSRHG
Sbjct: 379 YTKRDHSTSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRVPQIGDKFSSRHG 432


>gb|AAY85202.1| RNA polymerase II second largest subunit, partial [Dianthus
           caryophyllus]
          Length = 674

 Score =  458 bits (1179), Expect = e-155
 Identities = 222/252 (88%), Positives = 232/252 (92%)
 Frame = +3

Query: 18  RVKELRIYTDYGRCSRPLFIVENQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFXXXXX 197
           R+KELRIYTDYGRCSRPLFIVE QRLLI+KKDI+ALQQRE+PEDGGWHDLVAKGF     
Sbjct: 229 RLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRETPEDGGWHDLVAKGFIEYID 288

Query: 198 XXXXXXXXXXXXXNDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 377
                        NDL+SAR+NPEE+YS TYTHCEIHPSLILGVCASIIPFPDHNQSPRN
Sbjct: 289 TEEEETTMISMTINDLVSARLNPEESYSGTYTHCEIHPSLILGVCASIIPFPDHNQSPRN 348

Query: 378 TYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 557
           TYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI
Sbjct: 349 TYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI 408

Query: 558 ACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRH 737
           ACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRH
Sbjct: 409 ACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRH 468

Query: 738 GSYDKLDDDGLA 773
           GSYDKLDDDGLA
Sbjct: 469 GSYDKLDDDGLA 480



 Score =  102 bits (254), Expect = 2e-20
 Identities = 49/54 (90%), Positives = 53/54 (98%)
 Frame = +1

Query: 814 YTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 975
           Y+R+DHS SLRHSE+G+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG
Sbjct: 511 YSRKDHSISLRHSESGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHG 564