BLASTX nr result

ID: Acanthopanax21_contig00020775 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00020775
         (796 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP03186.1| unnamed protein product [Coffea canephora]             59   3e-06

>emb|CDP03186.1| unnamed protein product [Coffea canephora]
          Length = 683

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 30/64 (46%), Positives = 39/64 (60%)
 Frame = -2

Query: 705 ENSFTCGSRTLDGSFCRRKPGKGSKWCWQHQGKRVDRISKVSACNEST*LLSVIDQFSSR 526
           + S  CG+ T DGS C RKP +G+K CWQH+G RVD     S+CN S    S   Q++S 
Sbjct: 488 KTSPACGAATHDGSLCSRKPTEGNKRCWQHKGMRVDASPTSSSCNNSR-RSSTSLQYASE 546

Query: 525 GFSS 514
            F+S
Sbjct: 547 DFTS 550


Top