BLASTX nr result

ID: Acanthopanax21_contig00018311 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00018311
         (527 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017233633.1| PREDICTED: uncharacterized protein LOC108207...    74   3e-12
ref|XP_004294742.1| PREDICTED: structure-specific endonuclease s...    63   3e-08
ref|XP_011041810.1| PREDICTED: uncharacterized protein LOC105137...    60   2e-07
ref|XP_024157526.1| uncharacterized protein LOC112165275 [Rosa c...    60   2e-07
gb|PNS91755.1| hypothetical protein POPTR_019G127600v3 [Populus ...    59   5e-07
ref|XP_011080735.1| structure-specific endonuclease subunit SLX1...    56   6e-06

>ref|XP_017233633.1| PREDICTED: uncharacterized protein LOC108207709 [Daucus carota
           subsp. sativus]
 gb|KZN12142.1| hypothetical protein DCAR_004798 [Daucus carota subsp. sativus]
          Length = 394

 Score = 73.9 bits (180), Expect = 3e-12
 Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
 Frame = -2

Query: 493 RIEERTPKFLLNIEESGFKQARRDSERYDHQ-QPTFPIKSPESLILSAFVAETFERGIVP 317
           R E++T     NI  S   Q R     Y+H  QP+   K  E ++  + VA  F+  I+ 
Sbjct: 259 RAEKKTAVSTQNISRSDLVQPRSTLLEYNHHPQPSRTNKPLEEVVSCSHVA-AFQGSILS 317

Query: 316 LCEACSVELDWPSRKDLQTRAATVEDKPSIKSSTFLCDVEVIDVFTPEPSYGISLQPKKR 137
             ++CS EL  P+ +D+       +D+  I   T L +VEV+D+ TPE      L  K R
Sbjct: 318 QGKSCSAELISPAERDMPNINVFGKDEVLIVDPTVLSNVEVVDLSTPETGCRTRLHAKNR 377

Query: 136 RIDYSEIIDLTKSPIFI 86
           R D S+ IDLTKSP+F+
Sbjct: 378 RNDESKFIDLTKSPVFV 394


>ref|XP_004294742.1| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
           [Fragaria vesca subsp. vesca]
          Length = 400

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
 Frame = -2

Query: 394 TFPIKSPESLILSAFVAETFERGIVPLCEACSVELDWPSRKDLQTRAATVEDKPSIKSST 215
           T P++ P S ++ +F  E  +   + L +  +VELD P+RK  Q+ A  V D+     ++
Sbjct: 296 TSPLRMPYSNVIPSFDTEASKN--IGLFDDSTVELDRPARK--QSPAIIVADEEQSPRNS 351

Query: 214 FL--CDVEVIDVFTPEPSYGISLQPKKRRI--DYSEIIDLTKSPIFI 86
           +L  CD EV+D+ TP P     L  KK R+   Y EIIDLTKSP FI
Sbjct: 352 YLRPCDSEVVDLITPSPLCRNGLCGKKSRVPTSYPEIIDLTKSPNFI 398


>ref|XP_011041810.1| PREDICTED: uncharacterized protein LOC105137678 [Populus
           euphratica]
          Length = 591

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
 Frame = -2

Query: 382 KSPESLILSAFVAETFERGIVPLCEACSVELDWPSRKDLQTRAATVEDKPSIKSSTFLCD 203
           +S  S++    V ET +R ++ L +  + ELDWP RK L ++  T +DK   +SS+   +
Sbjct: 497 RSSSSIVTDFSVRETRDRDVLTLIKEDASELDWPRRKKLSSKINTGKDKQLNRSSSIPRE 556

Query: 202 VEVIDVFTPEPSYGISLQPKKRRID--YSEIIDLT 104
           +E++D+ +P     ++   KKRR+   Y  IIDLT
Sbjct: 557 IEIVDLSSPSLECRVTSDSKKRRVSPTYPVIIDLT 591


>ref|XP_024157526.1| uncharacterized protein LOC112165275 [Rosa chinensis]
 gb|PRQ34740.1| putative GIY-YIG nuclease superfamily, structure-specific
           endonuclease subunit Slx1 [Rosa chinensis]
          Length = 406

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
 Frame = -2

Query: 394 TFPIKSPESLILSAFVAETFERGIVPLCEACSVELDWPSRKDLQTRAATVEDKPSIKSST 215
           T P++ P S ++ +F  E  +     L +  +VELD P+R+  Q+    VED     S++
Sbjct: 302 TSPVRMPYSNVIPSFDTEASKN--TGLFDDSTVELDQPARE--QSPTIIVEDNERSPSNS 357

Query: 214 FL--CDVEVIDVFTPEPSYGISLQPKKRRI--DYSEIIDLTKSPIFI 86
           +L  CD EV+D+ TP P        K+ R+   Y EIIDLTKSP FI
Sbjct: 358 YLRPCDSEVVDLITPSPLCRNGFCGKRSRVPTSYPEIIDLTKSPNFI 404


>gb|PNS91755.1| hypothetical protein POPTR_019G127600v3 [Populus trichocarpa]
          Length = 592

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = -2

Query: 382 KSPESLILSAFVAETFERGIVPLCEACSVELDWPSRKDLQTRAATVEDKPSIKSSTFLCD 203
           +S  S++    V ET +RG++ L +  + ELDWP  K L ++  T +DK   +SS+   +
Sbjct: 498 RSSSSIVTDFSVRETRDRGVLTLIDDDASELDWPRWKKLSSKINTGKDKQLNRSSSIPRE 557

Query: 202 VEVIDVFTPEPSYGISLQPKKRRID--YSEIIDLT 104
           +E++D+ +P     I    KKRR+   Y  IIDLT
Sbjct: 558 IEIVDLSSPSLECRIRPDSKKRRVSPTYPVIIDLT 592


>ref|XP_011080735.1| structure-specific endonuclease subunit SLX1 homolog 2 [Sesamum
           indicum]
          Length = 402

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
 Frame = -2

Query: 379 SPESLILSAFVA--ETFER----GIVPLCEACSVELDWPSRKDLQTRAATVEDKPSIKSS 218
           SP+ L ++ F++  E F        V   E     LD   +K L   +++ ++  S++  
Sbjct: 298 SPDKLSIATFLSDKEPFSTEASWDTVSYIEDGQKSLDMAHQKQLTATSSSDKEPFSVEGP 357

Query: 217 TFLCDVEVIDVFTPEPSYGISLQPKKRR-IDYSEIIDLTKSPIFI 86
           +    VEVID+FTP P Y ++   KKRR   Y EIIDLT SP+F+
Sbjct: 358 SIRRKVEVIDIFTPSPCYRVNTGSKKRRPAVYPEIIDLTNSPMFV 402


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