BLASTX nr result

ID: Acanthopanax21_contig00018289 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00018289
         (730 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021838584.1| uncharacterized protein LOC110778326 [Spinac...    42   3e-07

>ref|XP_021838584.1| uncharacterized protein LOC110778326 [Spinacia oleracea]
          Length = 1082

 Score = 42.4 bits (98), Expect(3) = 3e-07
 Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
 Frame = +1

Query: 175 KKLWSLKIPPKVRHFLWRAFCQSVGIYRGL-----QVMVECPR 288
           KKLW L+IPPKVR FLWRA  +++    GL      +   CPR
Sbjct: 759 KKLWGLQIPPKVRSFLWRACSKALPTCVGLNRRVTSIETTCPR 801



 Score = 32.3 bits (72), Expect(3) = 3e-07
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 293 CGFERETIFHALISCPAAIATW 358
           CG   E  FHAL+ CP A+  W
Sbjct: 802 CGDNEENTFHALVKCPTAMEVW 823



 Score = 27.3 bits (59), Expect(3) = 3e-07
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
 Frame = +3

Query: 60  HVWHYSANGSF*SVWLCKE-----NKVSRASIGEPSS-ACTSLWKKV 182
           + W+YS NG    ++  K      +   R   GEPSS A T LWKK+
Sbjct: 719 YAWYYSKNG----IYSVKSGYHFISYYKRVLNGEPSSSATTELWKKL 761


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