BLASTX nr result

ID: Acanthopanax21_contig00018243 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00018243
         (542 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM91370.1| hypothetical protein DCAR_021265 [Daucus carota s...    72   2e-11
ref|XP_017257814.1| PREDICTED: homeobox-DDT domain protein RLT2 ...    72   2e-11
ref|XP_015573970.1| PREDICTED: homeobox-DDT domain protein RLT2 ...    56   9e-06
ref|XP_002517852.1| PREDICTED: homeobox-DDT domain protein RLT2 ...    56   9e-06
ref|XP_015573968.1| PREDICTED: homeobox-DDT domain protein RLT2 ...    56   9e-06

>gb|KZM91370.1| hypothetical protein DCAR_021265 [Daucus carota subsp. sativus]
          Length = 1696

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
 Frame = +1

Query: 106  SARNRQKSVKRATGVAAERDKSKSMILERTPISSVLKWKAEEIPMQVXXXXXXXXXXXXX 285
            SA+N+QK+ K++TGV+ +  ++  + ++RTP +SVLKW  E  P                
Sbjct: 1536 SAKNKQKATKKSTGVSGDSGETGDISVDRTPANSVLKWNIEPPPAYSPEESSTSDSQSED 1595

Query: 286  XXXTGQASGDEYDDLMVDNYPGVYNNSQSEH--FRQXXXXXXXXXXXXXXXXXXXXXXXX 459
                G AS  EYDD+MVDNYP +YN+ Q E+                             
Sbjct: 1596 NVENGLASA-EYDDIMVDNYPNMYNSRQLEYDVNGDEDYDDRAEAEEDGNDDDMDDFVED 1654

Query: 460  XXXXXXXXFNGYSDEEGE-RDTSGKQIG 540
                    FNGYSDE+G   D   KQ G
Sbjct: 1655 EQEDVERYFNGYSDEDGSMEDMDKKQTG 1682


>ref|XP_017257814.1| PREDICTED: homeobox-DDT domain protein RLT2 [Daucus carota subsp.
            sativus]
          Length = 1738

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
 Frame = +1

Query: 106  SARNRQKSVKRATGVAAERDKSKSMILERTPISSVLKWKAEEIPMQVXXXXXXXXXXXXX 285
            SA+N+QK+ K++TGV+ +  ++  + ++RTP +SVLKW  E  P                
Sbjct: 1578 SAKNKQKATKKSTGVSGDSGETGDISVDRTPANSVLKWNIEPPPAYSPEESSTSDSQSED 1637

Query: 286  XXXTGQASGDEYDDLMVDNYPGVYNNSQSEH--FRQXXXXXXXXXXXXXXXXXXXXXXXX 459
                G AS  EYDD+MVDNYP +YN+ Q E+                             
Sbjct: 1638 NVENGLASA-EYDDIMVDNYPNMYNSRQLEYDVNGDEDYDDRAEAEEDGNDDDMDDFVED 1696

Query: 460  XXXXXXXXFNGYSDEEGE-RDTSGKQIG 540
                    FNGYSDE+G   D   KQ G
Sbjct: 1697 EQEDVERYFNGYSDEDGSMEDMDKKQTG 1724


>ref|XP_015573970.1| PREDICTED: homeobox-DDT domain protein RLT2 isoform X3 [Ricinus
            communis]
          Length = 1760

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
 Frame = +1

Query: 106  SARNRQKSVKRATGVAAERDKSKSMILERTPISSVLK-WKAEEIPMQVXXXXXXXXXXXX 282
            S R+RQK VKRA  VAA+ + +K +I E+ P     + W  +E   Q             
Sbjct: 1597 SVRSRQKPVKRAVDVAAQTNVAKEIIYEKVPTKLEREDWNIDETRFQSRIAENLSSSERS 1656

Query: 283  XXXX-TGQASGDEYDDLMVDNYPGVYNNSQSE 375
                  GQA+GDEYDDL VD+Y G +N    +
Sbjct: 1657 EYDDENGQATGDEYDDLPVDDYTGGFNGKSDD 1688


>ref|XP_002517852.1| PREDICTED: homeobox-DDT domain protein RLT2 isoform X2 [Ricinus
            communis]
 gb|EEF44370.1| homeobox protein, putative [Ricinus communis]
          Length = 1784

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
 Frame = +1

Query: 106  SARNRQKSVKRATGVAAERDKSKSMILERTPISSVLK-WKAEEIPMQVXXXXXXXXXXXX 282
            S R+RQK VKRA  VAA+ + +K +I E+ P     + W  +E   Q             
Sbjct: 1621 SVRSRQKPVKRAVDVAAQTNVAKEIIYEKVPTKLEREDWNIDETRFQSRIAENLSSSERS 1680

Query: 283  XXXX-TGQASGDEYDDLMVDNYPGVYNNSQSE 375
                  GQA+GDEYDDL VD+Y G +N    +
Sbjct: 1681 EYDDENGQATGDEYDDLPVDDYTGGFNGKSDD 1712


>ref|XP_015573968.1| PREDICTED: homeobox-DDT domain protein RLT2 isoform X1 [Ricinus
            communis]
          Length = 1786

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
 Frame = +1

Query: 106  SARNRQKSVKRATGVAAERDKSKSMILERTPISSVLK-WKAEEIPMQVXXXXXXXXXXXX 282
            S R+RQK VKRA  VAA+ + +K +I E+ P     + W  +E   Q             
Sbjct: 1623 SVRSRQKPVKRAVDVAAQTNVAKEIIYEKVPTKLEREDWNIDETRFQSRIAENLSSSERS 1682

Query: 283  XXXX-TGQASGDEYDDLMVDNYPGVYNNSQSE 375
                  GQA+GDEYDDL VD+Y G +N    +
Sbjct: 1683 EYDDENGQATGDEYDDLPVDDYTGGFNGKSDD 1714


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