BLASTX nr result
ID: Acanthopanax21_contig00018186
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00018186
(408 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002304468.2| hypothetical protein POPTR_0003s12160g [Popu... 94 7e-20
dbj|BAA01974.1| chloroplast elongation factor TuA (EF-TuA), part... 92 4e-19
ref|XP_009779094.1| PREDICTED: elongation factor TuA, chloroplas... 92 5e-19
ref|XP_010319023.1| PREDICTED: elongation factor TuA, chloroplas... 92 6e-19
gb|ABH07510.1| chloroplast translation elongation factor, partia... 90 7e-19
ref|XP_004241515.1| PREDICTED: elongation factor TuB, chloroplas... 92 7e-19
ref|XP_015079133.1| PREDICTED: elongation factor TuB, chloroplas... 91 9e-19
ref|XP_006347424.1| PREDICTED: elongation factor TuB, chloroplas... 91 9e-19
ref|XP_006344478.1| PREDICTED: elongation factor TuA, chloroplas... 91 9e-19
ref|XP_009601497.1| PREDICTED: elongation factor TuB, chloroplas... 91 9e-19
ref|XP_017218982.1| PREDICTED: elongation factor TuB, chloroplas... 91 1e-18
ref|XP_017219133.1| PREDICTED: elongation factor TuB, chloroplas... 91 1e-18
ref|XP_019227020.1| PREDICTED: elongation factor TuA, chloroplas... 91 1e-18
ref|XP_009772722.1| PREDICTED: elongation factor TuB, chloroplas... 91 2e-18
ref|XP_009628327.1| PREDICTED: elongation factor TuA, chloroplas... 90 2e-18
ref|XP_019247438.1| PREDICTED: elongation factor TuB, chloroplas... 90 2e-18
ref|XP_016578249.1| PREDICTED: elongation factor TuB, chloroplas... 90 2e-18
ref|XP_010494495.1| PREDICTED: elongation factor Tu, chloroplast... 89 4e-18
ref|XP_011033799.1| PREDICTED: elongation factor Tu, chloroplast... 89 4e-18
ref|XP_011029181.1| PREDICTED: elongation factor Tu, chloroplast... 89 4e-18
>ref|XP_002304468.2| hypothetical protein POPTR_0003s12160g [Populus trichocarpa]
gb|PNT45164.1| hypothetical protein POPTR_003G121600v3 [Populus trichocarpa]
Length = 483
Score = 94.4 bits (233), Expect = 7e-20
Identities = 55/105 (52%), Positives = 64/105 (60%)
Frame = +3
Query: 93 NLIFHPSSSTNTTLALPLSNFATCSSHKKPSKLILSSSFLANPATLLFQTPATTTRLGSR 272
NL++ S+T +T + P F+ + K PSK ILSSSFL +P TTTR R
Sbjct: 14 NLLYPHHSTTTSTTSTP--TFSLTPTSKLPSKSILSSSFLPTLTPTSSSSPLTTTR--HR 69
Query: 273 ALTVRAARGKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXSMG 407
LTVRAARGKFERKKPH+NIGTIGHVDHGK SMG
Sbjct: 70 FLTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMG 114
>dbj|BAA01974.1| chloroplast elongation factor TuA (EF-TuA), partial [Nicotiana
sylvestris]
Length = 457
Score = 92.0 bits (227), Expect = 4e-19
Identities = 52/102 (50%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Frame = +3
Query: 111 SSSTNTTLALPLSNFATCSSHKKPSKLILSSSFLANPATLLFQTPATTTRLGS---RALT 281
+++++T L S S KPSKLILSSSF N +TL +PAT + + R T
Sbjct: 8 TATSSTKLVSSNSTNPLLPSSTKPSKLILSSSFTPNCSTLFLHSPATPSSTATHRHRRFT 67
Query: 282 VRAARGKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXSMG 407
VRAARGKFERKKPH+NIGTIGHVDHGK SMG
Sbjct: 68 VRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMG 109
>ref|XP_009779094.1| PREDICTED: elongation factor TuA, chloroplastic [Nicotiana
sylvestris]
ref|XP_016478946.1| PREDICTED: elongation factor TuA, chloroplastic [Nicotiana tabacum]
sp|Q40450.2|EFTUA_NICSY RecName: Full=Elongation factor TuA, chloroplastic; Short=EF-TuA;
Flags: Precursor
sp|P68158.1|EFTU_TOBAC RecName: Full=Elongation factor Tu, chloroplastic; Short=EF-Tu;
Flags: Precursor
gb|AAA18546.1| translation elongation factor EF-Tu [Nicotiana tabacum]
dbj|BAA02027.1| chloroplast elongation factor TuA(EF-TuA) [Nicotiana sylvestris]
Length = 478
Score = 92.0 bits (227), Expect = 5e-19
Identities = 52/102 (50%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Frame = +3
Query: 111 SSSTNTTLALPLSNFATCSSHKKPSKLILSSSFLANPATLLFQTPATTTRLGS---RALT 281
+++++T L S S KPSKLILSSSF N +TL +PAT + + R T
Sbjct: 8 TATSSTKLVSSNSTNPLLPSSTKPSKLILSSSFTPNCSTLFLHSPATPSSTATHRHRRFT 67
Query: 282 VRAARGKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXSMG 407
VRAARGKFERKKPH+NIGTIGHVDHGK SMG
Sbjct: 68 VRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMG 109
>ref|XP_010319023.1| PREDICTED: elongation factor TuA, chloroplastic [Solanum
lycopersicum]
ref|XP_015069657.1| PREDICTED: elongation factor TuA, chloroplastic [Solanum pennellii]
Length = 477
Score = 91.7 bits (226), Expect = 6e-19
Identities = 51/82 (62%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +3
Query: 168 SHKKPSKLILSSSFLANPATLLFQTPATT--TRLGSRALTVRAARGKFERKKPHINIGTI 341
S KPSKLILSSSF N +TLL +PA T T R TVRAARGKFERKKPH+NIGTI
Sbjct: 27 SAAKPSKLILSSSFTPNFSTLLLHSPAATSPTTHHQRRFTVRAARGKFERKKPHVNIGTI 86
Query: 342 GHVDHGKXXXXXXXXXXXXSMG 407
GHVDHGK SMG
Sbjct: 87 GHVDHGKTTLTAALTMALASMG 108
>gb|ABH07510.1| chloroplast translation elongation factor, partial [Nicotiana
attenuata]
Length = 311
Score = 90.1 bits (222), Expect = 7e-19
Identities = 53/107 (49%), Positives = 63/107 (58%), Gaps = 8/107 (7%)
Frame = +3
Query: 111 SSSTNTTLALPLSNFATCSSHK-------KPSKLILSSSFLANPATLLFQTPATT-TRLG 266
+++ +T LA P S ++ SS SKLILSSSF P+TL +P TT +
Sbjct: 10 TAAASTKLAYPYSPSSSTSSGNTAAVFPTNSSKLILSSSFTPTPSTLFLHSPTTTPSTTH 69
Query: 267 SRALTVRAARGKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXSMG 407
R TVRAARGKFERKKPH+NIGTIGHVDHGK SMG
Sbjct: 70 PRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMG 116
>ref|XP_004241515.1| PREDICTED: elongation factor TuB, chloroplastic-like [Solanum
lycopersicum]
Length = 518
Score = 91.7 bits (226), Expect = 7e-19
Identities = 51/88 (57%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = +3
Query: 111 SSSTNTTLALPLSNFATCSSHKKPSKLILSSSFLANPATLLFQTPATTTRLGS----RAL 278
+S+T A N + K SKLILSSSF NP+TL +PATT S R
Sbjct: 47 ASATAAAAASTKINTSGTVLPSKSSKLILSSSFTPNPSTLFLHSPATTAPSSSSSRHRRF 106
Query: 279 TVRAARGKFERKKPHINIGTIGHVDHGK 362
TVRAARGKFERKKPH+NIGTIGHVDHGK
Sbjct: 107 TVRAARGKFERKKPHVNIGTIGHVDHGK 134
>ref|XP_015079133.1| PREDICTED: elongation factor TuB, chloroplastic [Solanum pennellii]
Length = 477
Score = 91.3 bits (225), Expect = 9e-19
Identities = 47/66 (71%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
Frame = +3
Query: 177 KPSKLILSSSFLANPATLLFQTPATTTRLGS----RALTVRAARGKFERKKPHINIGTIG 344
K SKLILSSSF NP+TL +PATT S R TVRAARGKFERKKPH+NIGTIG
Sbjct: 28 KSSKLILSSSFTPNPSTLFLHSPATTAPSSSSSRHRRFTVRAARGKFERKKPHVNIGTIG 87
Query: 345 HVDHGK 362
HVDHGK
Sbjct: 88 HVDHGK 93
>ref|XP_006347424.1| PREDICTED: elongation factor TuB, chloroplastic [Solanum tuberosum]
Length = 477
Score = 91.3 bits (225), Expect = 9e-19
Identities = 47/65 (72%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
Frame = +3
Query: 177 KPSKLILSSSFLANPATLLFQTPATTTRLGS---RALTVRAARGKFERKKPHINIGTIGH 347
K SKLILSSSF P+TL +PATTT S R TVRAARGKFERKKPH+NIGTIGH
Sbjct: 29 KSSKLILSSSFTPTPSTLFLHSPATTTPSSSTRHRRFTVRAARGKFERKKPHVNIGTIGH 88
Query: 348 VDHGK 362
VDHGK
Sbjct: 89 VDHGK 93
>ref|XP_006344478.1| PREDICTED: elongation factor TuA, chloroplastic [Solanum tuberosum]
Length = 477
Score = 91.3 bits (225), Expect = 9e-19
Identities = 54/101 (53%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Frame = +3
Query: 111 SSSTNTTLALPLSNFATCSSHKKPSKLILSSSFLANPATLLFQTPATTTRLG--SRALTV 284
+++T++T L SN S KPSKLILSSSF N +TL +PA T+ R TV
Sbjct: 9 ATATSSTKLLNPSN-PLLPSATKPSKLILSSSFTPNLSTLFLHSPAATSPATHHQRRFTV 67
Query: 285 RAARGKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXSMG 407
RAARGKFERKKPH+NIGTIGHVDHGK SMG
Sbjct: 68 RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMG 108
>ref|XP_009601497.1| PREDICTED: elongation factor TuB, chloroplastic [Nicotiana
tomentosiformis]
Length = 485
Score = 91.3 bits (225), Expect = 9e-19
Identities = 53/107 (49%), Positives = 66/107 (61%), Gaps = 8/107 (7%)
Frame = +3
Query: 111 SSSTNTTLALPLS-NFATCSSH------KKPSKLILSSSFLANPATLLFQTPATT-TRLG 266
+++ +T LA P S +F++ SS+ SKL+LSSSF P+TL +P TT +
Sbjct: 10 TATASTKLAYPFSPSFSSSSSNTAAVFPSNSSKLVLSSSFTPTPSTLFLHSPTTTPSTTH 69
Query: 267 SRALTVRAARGKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXSMG 407
R TVRAARGKFERKKPH+NIGTIGHVDHGK SMG
Sbjct: 70 PRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMG 116
>ref|XP_017218982.1| PREDICTED: elongation factor TuB, chloroplastic-like [Daucus carota
subsp. sativus]
gb|KZM89101.1| hypothetical protein DCAR_026176 [Daucus carota subsp. sativus]
Length = 475
Score = 90.9 bits (224), Expect = 1e-18
Identities = 51/76 (67%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = +3
Query: 141 PLSNFATCSSHKKPSKLILSSSFLANPATLL--FQTPATTTRLGSRALTVRAARGKFERK 314
P S F+ SS K IL+SSFLANP+TL FQTP + R + LTVRAARGKFERK
Sbjct: 20 PNSAFSPTSSRK----FILTSSFLANPSTLSSQFQTPTSPFRSRATRLTVRAARGKFERK 75
Query: 315 KPHINIGTIGHVDHGK 362
KPHINIGTIGHVDHGK
Sbjct: 76 KPHINIGTIGHVDHGK 91
>ref|XP_017219133.1| PREDICTED: elongation factor TuB, chloroplastic-like [Daucus carota
subsp. sativus]
gb|KZM89102.1| hypothetical protein DCAR_026177 [Daucus carota subsp. sativus]
Length = 476
Score = 90.9 bits (224), Expect = 1e-18
Identities = 51/76 (67%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = +3
Query: 141 PLSNFATCSSHKKPSKLILSSSFLANPATLL--FQTPATTTRLGSRALTVRAARGKFERK 314
P S F+ SS K IL+SSFLANP+TL FQTP + R + LTVRAARGKFERK
Sbjct: 21 PNSAFSPTSSRK----FILTSSFLANPSTLSSQFQTPTSPFRSRATRLTVRAARGKFERK 76
Query: 315 KPHINIGTIGHVDHGK 362
KPHINIGTIGHVDHGK
Sbjct: 77 KPHINIGTIGHVDHGK 92
>ref|XP_019227020.1| PREDICTED: elongation factor TuA, chloroplastic [Nicotiana
attenuata]
gb|OIT31670.1| elongation factor tu, chloroplastic [Nicotiana attenuata]
Length = 478
Score = 90.9 bits (224), Expect = 1e-18
Identities = 54/100 (54%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Frame = +3
Query: 117 STNTTLALPLSNFATCSSHKKPSKLILSSSFLANPATLLFQTPATTTRLGS---RALTVR 287
S+NTT L S KPSKLILSSSF N +TL +PAT + + R TVR
Sbjct: 17 SSNTTNPL-------LPSSTKPSKLILSSSFTPNCSTLFLHSPATPSSTSTHRHRRFTVR 69
Query: 288 AARGKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXSMG 407
AARGKFERKKPH+NIGTIGHVDHGK SMG
Sbjct: 70 AARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMG 109
>ref|XP_009772722.1| PREDICTED: elongation factor TuB, chloroplastic [Nicotiana
sylvestris]
ref|XP_016502071.1| PREDICTED: elongation factor TuB, chloroplastic [Nicotiana tabacum]
sp|Q43364.1|EFTUB_NICSY RecName: Full=Elongation factor TuB, chloroplastic; Short=EF-TuB;
Flags: Precursor
dbj|BAA02028.1| chloroplast elongation factor TuB(EF-TuB) [Nicotiana sylvestris]
Length = 485
Score = 90.5 bits (223), Expect = 2e-18
Identities = 53/107 (49%), Positives = 63/107 (58%), Gaps = 8/107 (7%)
Frame = +3
Query: 111 SSSTNTTLALPLSNFATCSSHK-------KPSKLILSSSFLANPATLLFQTPATT-TRLG 266
+++ +T LA P S ++ SS SKLILSSSF P+TL +P TT +
Sbjct: 10 TATASTKLAYPYSPSSSSSSSNTAAVFPSNSSKLILSSSFTPTPSTLFLHSPTTTPSTTH 69
Query: 267 SRALTVRAARGKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXSMG 407
R TVRAARGKFERKKPH+NIGTIGHVDHGK SMG
Sbjct: 70 PRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMG 116
>ref|XP_009628327.1| PREDICTED: elongation factor TuA, chloroplastic [Nicotiana
tomentosiformis]
Length = 478
Score = 90.1 bits (222), Expect = 2e-18
Identities = 49/83 (59%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Frame = +3
Query: 168 SHKKPSKLILSSSFLANPATLLFQTPATTTRLGS---RALTVRAARGKFERKKPHINIGT 338
S KPSKLILSSSF N +TL +PAT + + R TVRAARGKFERKKPH+NIGT
Sbjct: 27 SSTKPSKLILSSSFTPNFSTLFLHSPATPSSTSTHRHRRFTVRAARGKFERKKPHVNIGT 86
Query: 339 IGHVDHGKXXXXXXXXXXXXSMG 407
IGHVDHGK SMG
Sbjct: 87 IGHVDHGKTTLTAALTMALASMG 109
>ref|XP_019247438.1| PREDICTED: elongation factor TuB, chloroplastic [Nicotiana
attenuata]
gb|OIT02173.1| elongation factor tub, chloroplastic [Nicotiana attenuata]
Length = 485
Score = 90.1 bits (222), Expect = 2e-18
Identities = 53/107 (49%), Positives = 63/107 (58%), Gaps = 8/107 (7%)
Frame = +3
Query: 111 SSSTNTTLALPLSNFATCSSHK-------KPSKLILSSSFLANPATLLFQTPATT-TRLG 266
+++ +T LA P S ++ SS SKLILSSSF P+TL +P TT +
Sbjct: 10 TAAASTKLAYPYSPSSSTSSGNTAAVFPTNSSKLILSSSFTPTPSTLFLHSPTTTPSTTH 69
Query: 267 SRALTVRAARGKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXSMG 407
R TVRAARGKFERKKPH+NIGTIGHVDHGK SMG
Sbjct: 70 PRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMG 116
>ref|XP_016578249.1| PREDICTED: elongation factor TuB, chloroplastic [Capsicum annuum]
Length = 487
Score = 90.1 bits (222), Expect = 2e-18
Identities = 52/95 (54%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Frame = +3
Query: 96 LIFHPSSSTNTTLALPLSNFATCSSHK-KPSKLILSSSFLANPATLLFQTPATTTRLGS- 269
L++HPS P S SS+ K SKLIL+SSF P+TL +P T T S
Sbjct: 17 LVYHPSC--------PSSGCGNTSSNSTKSSKLILTSSFTPTPSTLFLHSPCTKTCSSSS 68
Query: 270 ----RALTVRAARGKFERKKPHINIGTIGHVDHGK 362
R TVRAARGKFERKKPH+NIGTIGHVDHGK
Sbjct: 69 STRQRGFTVRAARGKFERKKPHVNIGTIGHVDHGK 103
>ref|XP_010494495.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform X1
[Camelina sativa]
ref|XP_019098021.1| PREDICTED: elongation factor Tu, chloroplastic-like isoform X2
[Camelina sativa]
Length = 476
Score = 89.4 bits (220), Expect = 4e-18
Identities = 53/107 (49%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Frame = +3
Query: 99 IFHPSSSTNTTLALPLSNFATCSSHKKPSKLILSSSFLANPATLLFQTPATTTRLGS--- 269
I P++S+++T L ++F + S KP L LSSSFL + +L T TTT +
Sbjct: 3 ISSPAASSSSTKLL--NSFTSPSISIKPQSLTLSSSFLPSITSLSITTTTTTTTISPHRL 60
Query: 270 -RALTVRAARGKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXSMG 407
RA TVRAARGKFERKKPH+NIGTIGHVDHGK SMG
Sbjct: 61 RRAFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMG 107
>ref|XP_011033799.1| PREDICTED: elongation factor Tu, chloroplastic [Populus euphratica]
Length = 483
Score = 89.4 bits (220), Expect = 4e-18
Identities = 54/105 (51%), Positives = 63/105 (60%)
Frame = +3
Query: 93 NLIFHPSSSTNTTLALPLSNFATCSSHKKPSKLILSSSFLANPATLLFQTPATTTRLGSR 272
NL++ S+T +T + P F+ + K SK ILSSSFL +P TTTR R
Sbjct: 14 NLLYPHHSTTTSTTSTP--TFSLTPTSKISSKSILSSSFLPPFTPTSSTSPLTTTR--HR 69
Query: 273 ALTVRAARGKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXSMG 407
LTVRAARGKFERKKPH+NIGTIGHVDHGK SMG
Sbjct: 70 FLTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAAPTMALASMG 114
>ref|XP_011029181.1| PREDICTED: elongation factor Tu, chloroplastic-like [Populus
euphratica]
Length = 483
Score = 89.4 bits (220), Expect = 4e-18
Identities = 53/105 (50%), Positives = 65/105 (61%)
Frame = +3
Query: 93 NLIFHPSSSTNTTLALPLSNFATCSSHKKPSKLILSSSFLANPATLLFQTPATTTRLGSR 272
NLI+ ++T ++ + P F+ + K PSK ILSSSFL+ + +P TTTR R
Sbjct: 14 NLIYPHHTTTTSSTSTP--TFSLKPTSKLPSKPILSSSFLSPFTSTSPTSPFTTTR--HR 69
Query: 273 ALTVRAARGKFERKKPHINIGTIGHVDHGKXXXXXXXXXXXXSMG 407
TVRAARGKFERKKPH+NIGTIGHVDHGK SMG
Sbjct: 70 TFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMG 114