BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00017818
         (1086 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017224037.1| PREDICTED: RNA polymerase II-associated prot...   309   2e-99
ref|XP_017224036.1| PREDICTED: RNA polymerase II-associated prot...   309   3e-99
ref|XP_017224035.1| PREDICTED: RNA polymerase II-associated prot...   309   3e-99
ref|XP_017224034.1| PREDICTED: RNA polymerase II-associated prot...   309   3e-99
ref|XP_017224033.1| PREDICTED: RNA polymerase II-associated prot...   309   3e-99
gb|EOY11664.1| Tetratricopeptide repeat (TPR)-like superfamily p...   289   7e-92
gb|EOY11663.1| Tetratricopeptide repeat (TPR)-like superfamily p...   289   2e-91
gb|EOY11661.1| Tetratricopeptide repeat (TPR)-like superfamily p...   289   2e-91
ref|XP_007031159.2| PREDICTED: RNA polymerase II-associated prot...   288   8e-91
ref|XP_023894070.1| RNA polymerase II-associated protein 3 isofo...   286   3e-90
ref|XP_021821336.1| RNA polymerase II-associated protein 3 isofo...   283   2e-89
ref|XP_021821334.1| RNA polymerase II-associated protein 3 isofo...   283   3e-89
ref|XP_020422929.1| RNA polymerase II-associated protein 3 isofo...   278   8e-88
ref|XP_016647749.1| PREDICTED: RNA polymerase II-associated prot...   283   1e-87
ref|XP_020422928.1| RNA polymerase II-associated protein 3 isofo...   278   2e-87
ref|XP_007205290.1| RNA polymerase II-associated protein 3 isofo...   278   2e-87
ref|XP_020422927.1| RNA polymerase II-associated protein 3 isofo...   278   2e-87
ref|XP_020422926.1| RNA polymerase II-associated protein 3 isofo...   278   2e-87
ref|XP_015874895.1| PREDICTED: RNA polymerase II-associated prot...   279   3e-87
ref|XP_011466139.1| PREDICTED: RNA polymerase II-associated prot...   276   2e-86

>ref|XP_017224037.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X5
           [Daucus carota subsp. sativus]
          Length = 416

 Score =  309 bits (792), Expect = 2e-99
 Identities = 160/257 (62%), Positives = 185/257 (71%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RRSTARKEL KLKES++DAEFALRLEPHNQEIK+Q+ ESK+LYEKEI KKA+ + K + +
Sbjct: 158 RRSTARKELHKLKESVEDAEFALRLEPHNQEIKRQHTESKALYEKEILKKAAASLKSAEK 217

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
             Q+  KPV EM+  +                 M VD  KRNHKTGQE+LK SV      
Sbjct: 218 GVQRVAKPVIEMSSQNNGVQTVSSGSENMGVAAMNVDSKKRNHKTGQEELKASVQELAAR 277

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                      NITPP SAY FEVSWRG SGDR+LQA+LLKVTSP ALP+IFKN+LSAPI
Sbjct: 278 AAALATAEAAKNITPPTSAYQFEVSWRGFSGDRSLQARLLKVTSPVALPRIFKNSLSAPI 337

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           LIDIVRCIAT F EE  +SVKYLESLTKVSRFD+IIMCL S DKAD+ K+WD +F  + T
Sbjct: 338 LIDIVRCIATIFNEEPAMSVKYLESLTKVSRFDIIIMCLPSTDKADLVKMWDHVFLKDGT 397

Query: 723 PAEYADMLDKLRSRYCP 773
            AEYA +L  LR +YCP
Sbjct: 398 SAEYAGVLRNLRPKYCP 414


>ref|XP_017224036.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X4
           [Daucus carota subsp. sativus]
          Length = 417

 Score =  309 bits (792), Expect = 3e-99
 Identities = 160/257 (62%), Positives = 185/257 (71%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RRSTARKEL KLKES++DAEFALRLEPHNQEIK+Q+ ESK+LYEKEI KKA+ + K + +
Sbjct: 159 RRSTARKELHKLKESVEDAEFALRLEPHNQEIKRQHTESKALYEKEILKKAAASLKSAEK 218

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
             Q+  KPV EM+  +                 M VD  KRNHKTGQE+LK SV      
Sbjct: 219 GVQRVAKPVIEMSSQNNGVQTVSSGSENMGVAAMNVDSKKRNHKTGQEELKASVQELAAR 278

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                      NITPP SAY FEVSWRG SGDR+LQA+LLKVTSP ALP+IFKN+LSAPI
Sbjct: 279 AAALATAEAAKNITPPTSAYQFEVSWRGFSGDRSLQARLLKVTSPVALPRIFKNSLSAPI 338

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           LIDIVRCIAT F EE  +SVKYLESLTKVSRFD+IIMCL S DKAD+ K+WD +F  + T
Sbjct: 339 LIDIVRCIATIFNEEPAMSVKYLESLTKVSRFDIIIMCLPSTDKADLVKMWDHVFLKDGT 398

Query: 723 PAEYADMLDKLRSRYCP 773
            AEYA +L  LR +YCP
Sbjct: 399 SAEYAGVLRNLRPKYCP 415


>ref|XP_017224035.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X3
           [Daucus carota subsp. sativus]
          Length = 424

 Score =  309 bits (792), Expect = 3e-99
 Identities = 160/257 (62%), Positives = 185/257 (71%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RRSTARKEL KLKES++DAEFALRLEPHNQEIK+Q+ ESK+LYEKEI KKA+ + K + +
Sbjct: 166 RRSTARKELHKLKESVEDAEFALRLEPHNQEIKRQHTESKALYEKEILKKAAASLKSAEK 225

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
             Q+  KPV EM+  +                 M VD  KRNHKTGQE+LK SV      
Sbjct: 226 GVQRVAKPVIEMSSQNNGVQTVSSGSENMGVAAMNVDSKKRNHKTGQEELKASVQELAAR 285

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                      NITPP SAY FEVSWRG SGDR+LQA+LLKVTSP ALP+IFKN+LSAPI
Sbjct: 286 AAALATAEAAKNITPPTSAYQFEVSWRGFSGDRSLQARLLKVTSPVALPRIFKNSLSAPI 345

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           LIDIVRCIAT F EE  +SVKYLESLTKVSRFD+IIMCL S DKAD+ K+WD +F  + T
Sbjct: 346 LIDIVRCIATIFNEEPAMSVKYLESLTKVSRFDIIIMCLPSTDKADLVKMWDHVFLKDGT 405

Query: 723 PAEYADMLDKLRSRYCP 773
            AEYA +L  LR +YCP
Sbjct: 406 SAEYAGVLRNLRPKYCP 422


>ref|XP_017224034.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
           [Daucus carota subsp. sativus]
          Length = 426

 Score =  309 bits (792), Expect = 3e-99
 Identities = 160/257 (62%), Positives = 185/257 (71%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RRSTARKEL KLKES++DAEFALRLEPHNQEIK+Q+ ESK+LYEKEI KKA+ + K + +
Sbjct: 168 RRSTARKELHKLKESVEDAEFALRLEPHNQEIKRQHTESKALYEKEILKKAAASLKSAEK 227

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
             Q+  KPV EM+  +                 M VD  KRNHKTGQE+LK SV      
Sbjct: 228 GVQRVAKPVIEMSSQNNGVQTVSSGSENMGVAAMNVDSKKRNHKTGQEELKASVQELAAR 287

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                      NITPP SAY FEVSWRG SGDR+LQA+LLKVTSP ALP+IFKN+LSAPI
Sbjct: 288 AAALATAEAAKNITPPTSAYQFEVSWRGFSGDRSLQARLLKVTSPVALPRIFKNSLSAPI 347

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           LIDIVRCIAT F EE  +SVKYLESLTKVSRFD+IIMCL S DKAD+ K+WD +F  + T
Sbjct: 348 LIDIVRCIATIFNEEPAMSVKYLESLTKVSRFDIIIMCLPSTDKADLVKMWDHVFLKDGT 407

Query: 723 PAEYADMLDKLRSRYCP 773
            AEYA +L  LR +YCP
Sbjct: 408 SAEYAGVLRNLRPKYCP 424


>ref|XP_017224033.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
           [Daucus carota subsp. sativus]
          Length = 427

 Score =  309 bits (792), Expect = 3e-99
 Identities = 160/257 (62%), Positives = 185/257 (71%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RRSTARKEL KLKES++DAEFALRLEPHNQEIK+Q+ ESK+LYEKEI KKA+ + K + +
Sbjct: 169 RRSTARKELHKLKESVEDAEFALRLEPHNQEIKRQHTESKALYEKEILKKAAASLKSAEK 228

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
             Q+  KPV EM+  +                 M VD  KRNHKTGQE+LK SV      
Sbjct: 229 GVQRVAKPVIEMSSQNNGVQTVSSGSENMGVAAMNVDSKKRNHKTGQEELKASVQELAAR 288

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                      NITPP SAY FEVSWRG SGDR+LQA+LLKVTSP ALP+IFKN+LSAPI
Sbjct: 289 AAALATAEAAKNITPPTSAYQFEVSWRGFSGDRSLQARLLKVTSPVALPRIFKNSLSAPI 348

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           LIDIVRCIAT F EE  +SVKYLESLTKVSRFD+IIMCL S DKAD+ K+WD +F  + T
Sbjct: 349 LIDIVRCIATIFNEEPAMSVKYLESLTKVSRFDIIIMCLPSTDKADLVKMWDHVFLKDGT 408

Query: 723 PAEYADMLDKLRSRYCP 773
            AEYA +L  LR +YCP
Sbjct: 409 SAEYAGVLRNLRPKYCP 425


>gb|EOY11664.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 5 [Theobroma cacao]
          Length = 389

 Score =  289 bits (740), Expect = 7e-92
 Identities = 147/259 (56%), Positives = 189/259 (72%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKESI+D EFALRLEP+NQEIKKQ+AE KSLYEKEI +KASG  + S++
Sbjct: 133 RRATARKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQ 192

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
           +AQ+ GK  +E  ++                  ++    K+N++T + +LK SV      
Sbjct: 193 EAQEVGK--SETKENGLGMHSASNSTQRTGVATVQGYQTKKNNRTRKPELKASVQELASL 250

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                      NI+PPN+AY FEVSWR LSGDR LQA LLKVTSP+ALPQIFKNALSA +
Sbjct: 251 AATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQAHLLKVTSPSALPQIFKNALSASM 310

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           L+DI++C+ATFF EE+DL++KYLE+LTKV RFD++IMCLSS +KAD+ K+WD +FC+  T
Sbjct: 311 LVDIIKCVATFFREEVDLAIKYLENLTKVPRFDMLIMCLSSTEKADLLKVWDDVFCNEAT 370

Query: 723 PAEYADMLDKLRSRYCPKR 779
           P E+A++LD LRS YC KR
Sbjct: 371 PIEWAEILDNLRSVYCLKR 389


>gb|EOY11663.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 4 [Theobroma cacao]
          Length = 421

 Score =  289 bits (740), Expect = 2e-91
 Identities = 147/259 (56%), Positives = 189/259 (72%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKESI+D EFALRLEP+NQEIKKQ+AE KSLYEKEI +KASG  + S++
Sbjct: 165 RRATARKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQ 224

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
           +AQ+ GK  +E  ++                  ++    K+N++T + +LK SV      
Sbjct: 225 EAQEVGK--SETKENGLGMHSASNSTQRTGVATVQGYQTKKNNRTRKPELKASVQELASL 282

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                      NI+PPN+AY FEVSWR LSGDR LQA LLKVTSP+ALPQIFKNALSA +
Sbjct: 283 AATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQAHLLKVTSPSALPQIFKNALSASM 342

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           L+DI++C+ATFF EE+DL++KYLE+LTKV RFD++IMCLSS +KAD+ K+WD +FC+  T
Sbjct: 343 LVDIIKCVATFFREEVDLAIKYLENLTKVPRFDMLIMCLSSTEKADLLKVWDDVFCNEAT 402

Query: 723 PAEYADMLDKLRSRYCPKR 779
           P E+A++LD LRS YC KR
Sbjct: 403 PIEWAEILDNLRSVYCLKR 421


>gb|EOY11661.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 2 [Theobroma cacao]
          Length = 422

 Score =  289 bits (740), Expect = 2e-91
 Identities = 147/259 (56%), Positives = 189/259 (72%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKESI+D EFALRLEP+NQEIKKQ+AE KSLYEKEI +KASG  + S++
Sbjct: 166 RRATARKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQ 225

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
           +AQ+ GK  +E  ++                  ++    K+N++T + +LK SV      
Sbjct: 226 EAQEVGK--SETKENGLGMHSASNSTQRTGVATVQGYQTKKNNRTRKPELKASVQELASL 283

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                      NI+PPN+AY FEVSWR LSGDR LQA LLKVTSP+ALPQIFKNALSA +
Sbjct: 284 AATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQAHLLKVTSPSALPQIFKNALSASM 343

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           L+DI++C+ATFF EE+DL++KYLE+LTKV RFD++IMCLSS +KAD+ K+WD +FC+  T
Sbjct: 344 LVDIIKCVATFFREEVDLAIKYLENLTKVPRFDMLIMCLSSTEKADLLKVWDDVFCNEAT 403

Query: 723 PAEYADMLDKLRSRYCPKR 779
           P E+A++LD LRS YC KR
Sbjct: 404 PIEWAEILDNLRSVYCLKR 422


>ref|XP_007031159.2| PREDICTED: RNA polymerase II-associated protein 3 isoform X4
           [Theobroma cacao]
          Length = 422

 Score =  288 bits (736), Expect = 8e-91
 Identities = 147/259 (56%), Positives = 188/259 (72%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKESI+D EFALRLEP+NQEIKKQ+AE KSLYEKEI +KASG  + S++
Sbjct: 166 RRATARKELGKLKESIEDTEFALRLEPNNQEIKKQHAEFKSLYEKEILQKASGVLRKSMQ 225

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
            AQ+ GK  +E  ++                  ++    K+N++T + +LK SV      
Sbjct: 226 GAQEVGK--SETKENGLGMHSASNSTQRTGVATVQGYQTKKNNRTRKPELKASVQELASL 283

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                      NI+PPN+AY FEVSWR LSGDR LQA LLKVTSP+ALPQIFKNALSA +
Sbjct: 284 AATRAMAEAAKNISPPNTAYQFEVSWRALSGDRALQAHLLKVTSPSALPQIFKNALSASM 343

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           L+DI++C+ATFF EE+DL++KYLE+LTKV RFD++IMCLSS +KAD+ K+WD +FC+  T
Sbjct: 344 LVDIIKCVATFFREEVDLAIKYLENLTKVPRFDMLIMCLSSTEKADLLKVWDDVFCNEAT 403

Query: 723 PAEYADMLDKLRSRYCPKR 779
           P E+A++LD LRS YC KR
Sbjct: 404 PIEWAEILDNLRSVYCLKR 422


>ref|XP_023894070.1| RNA polymerase II-associated protein 3 isoform X6 [Quercus suber]
          Length = 419

 Score =  286 bits (732), Expect = 3e-90
 Identities = 145/259 (55%), Positives = 177/259 (68%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL K KE  +DAEFALRLEP NQEIKKQY E++SLY+KEI +K SG  + S +
Sbjct: 164 RRATARKELGKYKECFEDAEFALRLEPDNQEIKKQYTEARSLYDKEILQKVSGPPRSSGQ 223

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
             QK     +++N H                      H K+NH+TG+++L  SV      
Sbjct: 224 GMQKVVSSGSKVNGHSVHPVPNNIQRSGVSAIQ---GHTKKNHRTGKQELMKSVQELASQ 280

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                      NITPP SAY FE SWRGLS DR LQA+LLK  SP ALPQIFKNALSA +
Sbjct: 281 AASRAKAEAAKNITPPKSAYQFEASWRGLSDDRALQARLLKAVSPTALPQIFKNALSASL 340

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           L+DI++C+ATFFIEEMDL+++Y+E+LT VSRFDL+IMCLSS D+ D+ KIWD +FC   T
Sbjct: 341 LVDIIKCVATFFIEEMDLAIRYIENLTNVSRFDLLIMCLSSTDRDDLHKIWDEVFCSEAT 400

Query: 723 PAEYADMLDKLRSRYCPKR 779
           P EYA+MLDKLRSRYC  R
Sbjct: 401 PIEYAEMLDKLRSRYCLNR 419


>ref|XP_021821336.1| RNA polymerase II-associated protein 3 isoform X3 [Prunus avium]
          Length = 401

 Score =  283 bits (725), Expect = 2e-89
 Identities = 146/259 (56%), Positives = 178/259 (68%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKESI+DAEFALRLEP NQEIKKQY E+KSLYEK I +KASG  K SV+
Sbjct: 146 RRATARKELGKLKESIEDAEFALRLEPQNQEIKKQYTEAKSLYEKTILQKASGARKNSVQ 205

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
           + QK GK  T++N                      +DH KRN+ T ++++K SV      
Sbjct: 206 EVQKVGKLDTKVNGQSIQPVSSSAQITEMTAV---LDHTKRNNTTRKQEVKASVQELASR 262

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                       ITPPNSAY FEVSWRGLSGD   Q  LLK  SP+ALPQIFKNAL+  I
Sbjct: 263 AASRVKAVAAEKITPPNSAYQFEVSWRGLSGDNARQTSLLKAISPSALPQIFKNALTVSI 322

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           L+DI++C+ATFF+EEMDL+V YLE+LT+V RFD +IM LSS+D AD+ KIW+ +F +  T
Sbjct: 323 LLDIIKCVATFFVEEMDLAVNYLENLTRVPRFDTLIMFLSSSDNADLVKIWNEVFDNEAT 382

Query: 723 PAEYADMLDKLRSRYCPKR 779
           P EYA  LD L ++YCPKR
Sbjct: 383 PIEYAQKLDNLHTKYCPKR 401


>ref|XP_021821334.1| RNA polymerase II-associated protein 3 isoform X1 [Prunus avium]
          Length = 411

 Score =  283 bits (725), Expect = 3e-89
 Identities = 146/259 (56%), Positives = 178/259 (68%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKESI+DAEFALRLEP NQEIKKQY E+KSLYEK I +KASG  K SV+
Sbjct: 156 RRATARKELGKLKESIEDAEFALRLEPQNQEIKKQYTEAKSLYEKTILQKASGARKNSVQ 215

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
           + QK GK  T++N                      +DH KRN+ T ++++K SV      
Sbjct: 216 EVQKVGKLDTKVNGQSIQPVSSSAQITEMTAV---LDHTKRNNTTRKQEVKASVQELASR 272

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                       ITPPNSAY FEVSWRGLSGD   Q  LLK  SP+ALPQIFKNAL+  I
Sbjct: 273 AASRVKAVAAEKITPPNSAYQFEVSWRGLSGDNARQTSLLKAISPSALPQIFKNALTVSI 332

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           L+DI++C+ATFF+EEMDL+V YLE+LT+V RFD +IM LSS+D AD+ KIW+ +F +  T
Sbjct: 333 LLDIIKCVATFFVEEMDLAVNYLENLTRVPRFDTLIMFLSSSDNADLVKIWNEVFDNEAT 392

Query: 723 PAEYADMLDKLRSRYCPKR 779
           P EYA  LD L ++YCPKR
Sbjct: 393 PIEYAQKLDNLHTKYCPKR 411


>ref|XP_020422929.1| RNA polymerase II-associated protein 3 isoform X5 [Prunus persica]
          Length = 375

 Score =  278 bits (712), Expect = 8e-88
 Identities = 144/259 (55%), Positives = 175/259 (67%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKESI+DAEFALRLEP NQEIKKQY E+KSLY+K I +KASG  K SV+
Sbjct: 120 RRATARKELGKLKESIEDAEFALRLEPQNQEIKKQYTEAKSLYDKTILQKASGAQKNSVQ 179

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
           + +K GK  T++N                       DH KRN+ T   ++K SV      
Sbjct: 180 EMRKVGKLDTKVNGQSIQPASSSAQITEMTAVQ---DHTKRNNTTRNPEVKASVQELASR 236

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                       I PPNSAY FEVSWRG SGD   Q  LLK  SP+ALPQIFKNAL+ PI
Sbjct: 237 AASRVKAVAAEKIKPPNSAYQFEVSWRGFSGDNARQTSLLKAISPSALPQIFKNALTVPI 296

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           L+DI++C+ATFF+EEMDL+V YLE+LT+V RFD +IM LSS+D AD+ KIWD +F +  T
Sbjct: 297 LLDIIKCVATFFVEEMDLAVNYLENLTRVPRFDTLIMFLSSSDNADLVKIWDEVFDNEAT 356

Query: 723 PAEYADMLDKLRSRYCPKR 779
           P EYA+ LD LR++YC KR
Sbjct: 357 PIEYAEKLDNLRTKYCLKR 375


>ref|XP_016647749.1| PREDICTED: RNA polymerase II-associated protein 3 [Prunus mume]
          Length = 547

 Score =  283 bits (725), Expect = 1e-87
 Identities = 146/259 (56%), Positives = 178/259 (68%)
 Frame = +3

Query: 3    RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
            RR+TARKEL KLKESI+DAEFALRLEP NQEIKKQY E+KSLYEK I +K SG  K SV+
Sbjct: 292  RRATARKELGKLKESIEDAEFALRLEPQNQEIKKQYTEAKSLYEKTILQKTSGARKNSVQ 351

Query: 183  QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
            + QK GK  T++N                       DH KRN+ T ++++K SV      
Sbjct: 352  EMQKVGKLDTKVNGQSIQPVSSSAQITEMTAVQ---DHTKRNNTTRKQEVKASVQELASR 408

Query: 363  XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                        ITPPNSAY FEVSWRGL+GD   Q  LLK  SP+ALPQIFKNAL+ PI
Sbjct: 409  AASRVKAVAAEKITPPNSAYQFEVSWRGLAGDNAGQTSLLKAISPSALPQIFKNALTVPI 468

Query: 543  LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
            L+DI++C+ATFFIEE+DL+V YLE+LT+V RFD +IM LSS+D AD+ KIWD +F +  T
Sbjct: 469  LLDIIKCVATFFIEEIDLAVNYLENLTRVPRFDTLIMFLSSSDNADLVKIWDEVFDNEAT 528

Query: 723  PAEYADMLDKLRSRYCPKR 779
            P EYA+ LD L ++YCPKR
Sbjct: 529  PIEYAEKLDNLHTKYCPKR 547



 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/75 (69%), Positives = 61/75 (81%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKESI+DAEFALRLEP NQEIKKQY E+KSLYEK I +K SG  K SV+
Sbjct: 156 RRATARKELGKLKESIEDAEFALRLEPQNQEIKKQYTEAKSLYEKTILQKTSGARKNSVQ 215

Query: 183 QAQKAGKPVTEMNDH 227
           + QK GK  T+ N++
Sbjct: 216 EMQKVGKLDTKGNEY 230


>ref|XP_020422928.1| RNA polymerase II-associated protein 3 isoform X4 [Prunus persica]
          Length = 400

 Score =  278 bits (712), Expect = 2e-87
 Identities = 144/259 (55%), Positives = 175/259 (67%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKESI+DAEFALRLEP NQEIKKQY E+KSLY+K I +KASG  K SV+
Sbjct: 145 RRATARKELGKLKESIEDAEFALRLEPQNQEIKKQYTEAKSLYDKTILQKASGAQKNSVQ 204

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
           + +K GK  T++N                       DH KRN+ T   ++K SV      
Sbjct: 205 EMRKVGKLDTKVNGQSIQPASSSAQITEMTAVQ---DHTKRNNTTRNPEVKASVQELASR 261

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                       I PPNSAY FEVSWRG SGD   Q  LLK  SP+ALPQIFKNAL+ PI
Sbjct: 262 AASRVKAVAAEKIKPPNSAYQFEVSWRGFSGDNARQTSLLKAISPSALPQIFKNALTVPI 321

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           L+DI++C+ATFF+EEMDL+V YLE+LT+V RFD +IM LSS+D AD+ KIWD +F +  T
Sbjct: 322 LLDIIKCVATFFVEEMDLAVNYLENLTRVPRFDTLIMFLSSSDNADLVKIWDEVFDNEAT 381

Query: 723 PAEYADMLDKLRSRYCPKR 779
           P EYA+ LD LR++YC KR
Sbjct: 382 PIEYAEKLDNLRTKYCLKR 400


>ref|XP_007205290.1| RNA polymerase II-associated protein 3 isoform X3 [Prunus persica]
          Length = 401

 Score =  278 bits (712), Expect = 2e-87
 Identities = 144/259 (55%), Positives = 175/259 (67%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKESI+DAEFALRLEP NQEIKKQY E+KSLY+K I +KASG  K SV+
Sbjct: 146 RRATARKELGKLKESIEDAEFALRLEPQNQEIKKQYTEAKSLYDKTILQKASGAQKNSVQ 205

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
           + +K GK  T++N                       DH KRN+ T   ++K SV      
Sbjct: 206 EMRKVGKLDTKVNGQSIQPASSSAQITEMTAVQ---DHTKRNNTTRNPEVKASVQELASR 262

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                       I PPNSAY FEVSWRG SGD   Q  LLK  SP+ALPQIFKNAL+ PI
Sbjct: 263 AASRVKAVAAEKIKPPNSAYQFEVSWRGFSGDNARQTSLLKAISPSALPQIFKNALTVPI 322

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           L+DI++C+ATFF+EEMDL+V YLE+LT+V RFD +IM LSS+D AD+ KIWD +F +  T
Sbjct: 323 LLDIIKCVATFFVEEMDLAVNYLENLTRVPRFDTLIMFLSSSDNADLVKIWDEVFDNEAT 382

Query: 723 PAEYADMLDKLRSRYCPKR 779
           P EYA+ LD LR++YC KR
Sbjct: 383 PIEYAEKLDNLRTKYCLKR 401


>ref|XP_020422927.1| RNA polymerase II-associated protein 3 isoform X2 [Prunus persica]
          Length = 410

 Score =  278 bits (712), Expect = 2e-87
 Identities = 144/259 (55%), Positives = 175/259 (67%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKESI+DAEFALRLEP NQEIKKQY E+KSLY+K I +KASG  K SV+
Sbjct: 155 RRATARKELGKLKESIEDAEFALRLEPQNQEIKKQYTEAKSLYDKTILQKASGAQKNSVQ 214

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
           + +K GK  T++N                       DH KRN+ T   ++K SV      
Sbjct: 215 EMRKVGKLDTKVNGQSIQPASSSAQITEMTAVQ---DHTKRNNTTRNPEVKASVQELASR 271

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                       I PPNSAY FEVSWRG SGD   Q  LLK  SP+ALPQIFKNAL+ PI
Sbjct: 272 AASRVKAVAAEKIKPPNSAYQFEVSWRGFSGDNARQTSLLKAISPSALPQIFKNALTVPI 331

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           L+DI++C+ATFF+EEMDL+V YLE+LT+V RFD +IM LSS+D AD+ KIWD +F +  T
Sbjct: 332 LLDIIKCVATFFVEEMDLAVNYLENLTRVPRFDTLIMFLSSSDNADLVKIWDEVFDNEAT 391

Query: 723 PAEYADMLDKLRSRYCPKR 779
           P EYA+ LD LR++YC KR
Sbjct: 392 PIEYAEKLDNLRTKYCLKR 410


>ref|XP_020422926.1| RNA polymerase II-associated protein 3 isoform X1 [Prunus persica]
          Length = 411

 Score =  278 bits (712), Expect = 2e-87
 Identities = 144/259 (55%), Positives = 175/259 (67%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKESI+DAEFALRLEP NQEIKKQY E+KSLY+K I +KASG  K SV+
Sbjct: 156 RRATARKELGKLKESIEDAEFALRLEPQNQEIKKQYTEAKSLYDKTILQKASGAQKNSVQ 215

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
           + +K GK  T++N                       DH KRN+ T   ++K SV      
Sbjct: 216 EMRKVGKLDTKVNGQSIQPASSSAQITEMTAVQ---DHTKRNNTTRNPEVKASVQELASR 272

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                       I PPNSAY FEVSWRG SGD   Q  LLK  SP+ALPQIFKNAL+ PI
Sbjct: 273 AASRVKAVAAEKIKPPNSAYQFEVSWRGFSGDNARQTSLLKAISPSALPQIFKNALTVPI 332

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           L+DI++C+ATFF+EEMDL+V YLE+LT+V RFD +IM LSS+D AD+ KIWD +F +  T
Sbjct: 333 LLDIIKCVATFFVEEMDLAVNYLENLTRVPRFDTLIMFLSSSDNADLVKIWDEVFDNEAT 392

Query: 723 PAEYADMLDKLRSRYCPKR 779
           P EYA+ LD LR++YC KR
Sbjct: 393 PIEYAEKLDNLRTKYCLKR 411


>ref|XP_015874895.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
           [Ziziphus jujuba]
          Length = 439

 Score =  279 bits (714), Expect = 3e-87
 Identities = 145/278 (52%), Positives = 184/278 (66%), Gaps = 20/278 (7%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKE ++DAEFA+RLEPHNQEIKKQY+E+KSLYEK I +KAS   + +V+
Sbjct: 162 RRATARKELGKLKECLEDAEFAMRLEPHNQEIKKQYSEAKSLYEKNILQKASVALENTVQ 221

Query: 183 QAQKAGKPVTEMNDH----------------DXXXXXXXXXXXXXXXXXMEV----DHGK 302
           + QK GK   ++N                  D                  E+    D  K
Sbjct: 222 KFQKVGKSDAKVNGQGTHPVSVQEIQEGRTSDAKVNGHPIQPVSIATQSTEIAAAQDRSK 281

Query: 303 RNHKTGQEQLKTSVXXXXXXXXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLL 482
           RNH T +++L+TSV                 NITPP SAY FEVSWRG+SGD  LQA LL
Sbjct: 282 RNHVTRKQELQTSVQEIASRAASRAKIEAAKNITPPKSAYQFEVSWRGISGDPALQASLL 341

Query: 483 KVTSPAALPQIFKNALSAPILIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLS 662
           K   P+ LPQIFKNAL+ PIL+DIV+C+ATFF EEMDL+V +LE+LTKVSRFD+++MCL+
Sbjct: 342 KAIPPSELPQIFKNALTVPILVDIVKCVATFFGEEMDLAVSFLENLTKVSRFDVLMMCLT 401

Query: 663 SADKADIAKIWDGIFCDNTTPAEYADMLDKLRSRYCPK 776
           S D+AD+AK+WD +FC+   P EY ++LDKLRS+YC K
Sbjct: 402 STDRADLAKLWDEVFCNEAAPVEYVEILDKLRSKYCLK 439


>ref|XP_011466139.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
           [Fragaria vesca subsp. vesca]
          Length = 397

 Score =  276 bits (705), Expect = 2e-86
 Identities = 147/259 (56%), Positives = 176/259 (67%)
 Frame = +3

Query: 3   RRSTARKELRKLKESIDDAEFALRLEPHNQEIKKQYAESKSLYEKEIFKKASGTSKGSVE 182
           RR+TARKEL KLKESI+DAEFALRLEPHNQEIKKQYAE+KSLYEK I +K SG  K S +
Sbjct: 142 RRATARKELGKLKESIEDAEFALRLEPHNQEIKKQYAEAKSLYEKGILQKVSGAIKISEQ 201

Query: 183 QAQKAGKPVTEMNDHDXXXXXXXXXXXXXXXXXMEVDHGKRNHKTGQEQLKTSVXXXXXX 362
             QK  K  T +N H                     DH K+ +  G++  K SV      
Sbjct: 202 DKQKVEKSGTTVNGHSIQPVSSTTQRTETTAVG---DHTKKINTNGKQASKLSVQELASR 258

Query: 363 XXXXXXXXXXXNITPPNSAYHFEVSWRGLSGDRTLQAQLLKVTSPAALPQIFKNALSAPI 542
                      NITPP+SAY FE SWRGLSGDR LQA+LLK  SP+ALPQIFKNAL+  I
Sbjct: 259 AASRAKALAAENITPPSSAYQFEASWRGLSGDRALQAKLLKAISPSALPQIFKNALTVHI 318

Query: 543 LIDIVRCIATFFIEEMDLSVKYLESLTKVSRFDLIIMCLSSADKADIAKIWDGIFCDNTT 722
           L+DI++C+ TFFI+EMDL+V  LE+LTKV RFD +IM LSS DKAD+AKIWD +F +  T
Sbjct: 319 LVDILKCVTTFFIDEMDLAVSVLENLTKVPRFDTLIMFLSSNDKADLAKIWDEVFYNEAT 378

Query: 723 PAEYADMLDKLRSRYCPKR 779
           P E+A+ LD LR++YC KR
Sbjct: 379 PIEFAEKLDNLRAKYCLKR 397