BLASTX nr result

ID: Acanthopanax21_contig00017595 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00017595
         (459 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM87402.1| hypothetical protein DCAR_024536 [Daucus carota s...    87   1e-17

>gb|KZM87402.1| hypothetical protein DCAR_024536 [Daucus carota subsp. sativus]
          Length = 307

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 63/147 (42%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
 Frame = -2

Query: 428 ERRMTPMKMSQIRERERKGVGQRREVGNEPI----VILMTMTMVAGREGRRKGGEMSHLM 261
           + + T M MS I + +R  V QRR    EP+    VILM M  VAGREG+++GGEM+ LM
Sbjct: 144 DEKRTTMMMSSIVKGKRLRVDQRRR---EPVEGTTVILMQMMRVAGREGKKRGGEMNRLM 200

Query: 260 RMTIVDDXXXXXXXXXXXXGVIDIQMIQMDPRNAVDVISRRAGEQLWLLILMQAAQ-RIP 84
           R  IVDD               +IQMI MD RNA + I  RAGE+   L+++ A    I 
Sbjct: 201 RRMIVDDSIERVGRKGGEGKASNIQMIWMDLRNAPEGIGGRAGEKDRSLLMLAARMILIQ 260

Query: 83  GLAGTKNDLRRGAGNATMKKRTSFTLG 3
            +   K +L RGAGN T     SF+LG
Sbjct: 261 EVEEAKYNLERGAGN-TATNEISFSLG 286


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