BLASTX nr result
ID: Acanthopanax21_contig00017520
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00017520
(847 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDY19734.1| BnaA09g03870D [Brassica napus] 187 1e-56
ref|XP_022875882.1| sm-like protein LSM4 isoform X2 [Olea europa... 187 2e-56
ref|XP_022875874.1| sm-like protein LSM4 isoform X1 [Olea europa... 187 2e-56
ref|XP_002874352.2| sm-like protein LSM4 [Arabidopsis lyrata sub... 186 5e-56
ref|XP_010550988.1| PREDICTED: sm-like protein LSM4 [Tarenaya ha... 186 6e-56
ref|XP_010546724.1| PREDICTED: sm-like protein LSM4 [Tarenaya ha... 186 7e-56
gb|EFH50611.1| hypothetical protein ARALYDRAFT_326933 [Arabidops... 186 8e-56
ref|XP_021775372.1| sm-like protein LSM4 [Chenopodium quinoa] 186 8e-56
ref|XP_021763162.1| sm-like protein LSM4 [Chenopodium quinoa] 186 8e-56
ref|XP_021848918.1| sm-like protein LSM4 isoform X2 [Spinacia ol... 186 8e-56
ref|XP_021848917.1| sm-like protein LSM4 isoform X1 [Spinacia ol... 186 8e-56
ref|XP_010684532.1| PREDICTED: sm-like protein LSM4 [Beta vulgar... 186 8e-56
ref|XP_003628456.2| u6 snRNA-associated-like-Smprotein [Medicago... 186 9e-56
ref|XP_003630090.2| u6 snRNA-associated-like-Smprotein [Medicago... 186 1e-55
ref|XP_003625914.1| u6 snRNA-associated-like-Smprotein [Medicago... 186 1e-55
ref|XP_018454695.1| PREDICTED: sm-like protein LSM4 [Raphanus sa... 184 1e-55
ref|XP_018478727.1| PREDICTED: sm-like protein LSM4 [Raphanus sa... 184 1e-55
ref|XP_013595712.1| PREDICTED: sm-like protein LSM4 [Brassica ol... 184 1e-55
ref|XP_010493981.1| PREDICTED: sm-like protein LSM4 [Camelina sa... 184 1e-55
ref|XP_009151187.1| PREDICTED: sm-like protein LSM4 [Brassica ra... 184 1e-55
>emb|CDY19734.1| BnaA09g03870D [Brassica napus]
Length = 133
Score = 187 bits (475), Expect = 1e-56
Identities = 86/90 (95%), Positives = 89/90 (98%)
Frame = -2
Query: 756 IRKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP 577
+ KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP
Sbjct: 2 LEKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP 61
Query: 576 ECYIRGNTIKYLRVPDEVIDKVQEEKSRSD 487
ECYIRGNTIKYLRVPDEVIDKVQEEK+R+D
Sbjct: 62 ECYIRGNTIKYLRVPDEVIDKVQEEKTRTD 91
>ref|XP_022875882.1| sm-like protein LSM4 isoform X2 [Olea europaea var. sylvestris]
Length = 138
Score = 187 bits (474), Expect = 2e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSRSD
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRSD 87
>ref|XP_022875874.1| sm-like protein LSM4 isoform X1 [Olea europaea var. sylvestris]
Length = 139
Score = 187 bits (474), Expect = 2e-56
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSRSD
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRSD 87
>ref|XP_002874352.2| sm-like protein LSM4 [Arabidopsis lyrata subsp. lyrata]
Length = 129
Score = 186 bits (471), Expect = 5e-56
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSR+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTD 87
>ref|XP_010550988.1| PREDICTED: sm-like protein LSM4 [Tarenaya hassleriana]
Length = 136
Score = 186 bits (471), Expect = 6e-56
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSR+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTD 87
>ref|XP_010546724.1| PREDICTED: sm-like protein LSM4 [Tarenaya hassleriana]
Length = 141
Score = 186 bits (471), Expect = 7e-56
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSR+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTD 87
>gb|EFH50611.1| hypothetical protein ARALYDRAFT_326933 [Arabidopsis lyrata subsp.
lyrata]
Length = 143
Score = 186 bits (471), Expect = 8e-56
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSR+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTD 87
>ref|XP_021775372.1| sm-like protein LSM4 [Chenopodium quinoa]
Length = 144
Score = 186 bits (471), Expect = 8e-56
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSR+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTD 87
>ref|XP_021763162.1| sm-like protein LSM4 [Chenopodium quinoa]
Length = 144
Score = 186 bits (471), Expect = 8e-56
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSR+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTD 87
>ref|XP_021848918.1| sm-like protein LSM4 isoform X2 [Spinacia oleracea]
gb|KNA20524.1| hypothetical protein SOVF_051390 isoform A [Spinacia oleracea]
Length = 144
Score = 186 bits (471), Expect = 8e-56
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSR+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTD 87
>ref|XP_021848917.1| sm-like protein LSM4 isoform X1 [Spinacia oleracea]
gb|KNA20525.1| hypothetical protein SOVF_051390 isoform B [Spinacia oleracea]
Length = 145
Score = 186 bits (471), Expect = 8e-56
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSR+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTD 87
>ref|XP_010684532.1| PREDICTED: sm-like protein LSM4 [Beta vulgaris subsp. vulgaris]
gb|KMT06000.1| hypothetical protein BVRB_7g164860 [Beta vulgaris subsp. vulgaris]
Length = 145
Score = 186 bits (471), Expect = 8e-56
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSR+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTD 87
>ref|XP_003628456.2| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
ref|XP_013445372.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
gb|KEH19398.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
gb|AET02932.2| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
Length = 146
Score = 186 bits (471), Expect = 9e-56
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSR+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTD 87
>ref|XP_003630090.2| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
gb|AET04566.2| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
Length = 150
Score = 186 bits (471), Expect = 1e-55
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSR+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTD 87
>ref|XP_003625914.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
gb|AES82132.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
Length = 150
Score = 186 bits (471), Expect = 1e-55
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEKSR+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTD 87
>ref|XP_018454695.1| PREDICTED: sm-like protein LSM4 [Raphanus sativus]
Length = 129
Score = 184 bits (468), Expect = 1e-55
Identities = 85/87 (97%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEK+R+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTD 87
>ref|XP_018478727.1| PREDICTED: sm-like protein LSM4 [Raphanus sativus]
ref|XP_018478728.1| PREDICTED: sm-like protein LSM4 [Raphanus sativus]
Length = 129
Score = 184 bits (468), Expect = 1e-55
Identities = 85/87 (97%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEK+R+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTD 87
>ref|XP_013595712.1| PREDICTED: sm-like protein LSM4 [Brassica oleracea var. oleracea]
ref|XP_013595713.1| PREDICTED: sm-like protein LSM4 [Brassica oleracea var. oleracea]
ref|XP_013643934.1| sm-like protein LSM4 isoform X1 [Brassica napus]
ref|XP_022561640.1| sm-like protein LSM4 isoform X1 [Brassica napus]
Length = 129
Score = 184 bits (468), Expect = 1e-55
Identities = 85/87 (97%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEK+R+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTD 87
>ref|XP_010493981.1| PREDICTED: sm-like protein LSM4 [Camelina sativa]
Length = 129
Score = 184 bits (468), Expect = 1e-55
Identities = 85/87 (97%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEK+R+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTD 87
>ref|XP_009151187.1| PREDICTED: sm-like protein LSM4 [Brassica rapa]
ref|XP_009151188.1| PREDICTED: sm-like protein LSM4 [Brassica rapa]
ref|XP_009111743.1| PREDICTED: sm-like protein LSM4 [Brassica rapa]
ref|XP_013613180.1| PREDICTED: sm-like protein LSM4 [Brassica oleracea var. oleracea]
ref|XP_013703698.1| sm-like protein LSM4 [Brassica napus]
ref|XP_022547981.1| sm-like protein LSM4 [Brassica napus]
Length = 129
Score = 184 bits (468), Expect = 1e-55
Identities = 85/87 (97%), Positives = 87/87 (100%)
Frame = -2
Query: 747 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 568
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 567 IRGNTIKYLRVPDEVIDKVQEEKSRSD 487
IRGNTIKYLRVPDEVIDKVQEEK+R+D
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTD 87