BLASTX nr result
ID: Acanthopanax21_contig00015804
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00015804
(1402 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017215057.1| PREDICTED: RNA pseudouridine synthase 2, chl... 516 e-178
gb|KZM89696.1| hypothetical protein DCAR_022941 [Daucus carota s... 511 e-177
ref|XP_019186766.1| PREDICTED: RNA pseudouridine synthase 2, chl... 509 e-175
ref|XP_018808134.1| PREDICTED: RNA pseudouridine synthase 2, chl... 493 e-169
ref|XP_023875750.1| LOW QUALITY PROTEIN: RNA pseudouridine synth... 486 e-166
ref|XP_022855455.1| RNA pseudouridine synthase 2, chloroplastic ... 479 e-165
ref|XP_010320443.1| PREDICTED: RNA pseudouridine synthase 2, chl... 481 e-165
ref|XP_003634352.1| PREDICTED: RNA pseudouridine synthase 2, chl... 481 e-165
ref|XP_004238386.1| PREDICTED: RNA pseudouridine synthase 2, chl... 480 e-164
ref|XP_023755389.1| RNA pseudouridine synthase 2, chloroplastic ... 481 e-164
ref|XP_016493442.1| PREDICTED: RNA pseudouridine synthase 2, chl... 479 e-164
ref|XP_009620048.1| PREDICTED: RNA pseudouridine synthase 2, chl... 479 e-164
gb|KVI07293.1| Pseudouridine synthase, catalytic domain-containi... 479 e-164
gb|OVA15944.1| RNA-binding S4 domain [Macleaya cordata] 480 e-164
ref|XP_022855454.1| RNA pseudouridine synthase 2, chloroplastic ... 479 e-164
ref|XP_009798870.1| PREDICTED: RNA pseudouridine synthase 2, chl... 479 e-164
ref|XP_023755391.1| RNA pseudouridine synthase 2, chloroplastic ... 479 e-164
ref|XP_022855453.1| RNA pseudouridine synthase 2, chloroplastic ... 479 e-163
ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chl... 478 e-163
ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chl... 478 e-163
>ref|XP_017215057.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Daucus carota
subsp. sativus]
Length = 431
Score = 516 bits (1329), Expect = e-178
Identities = 253/328 (77%), Positives = 286/328 (87%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSH +++GD+VSC ISEL LKA+P+DIPLDI+YEDDH+LVVNKP HMVVHPAPGNA GT
Sbjct: 101 VSHKLKSGDKVSCTISELQPLKAQPQDIPLDILYEDDHLLVVNKPPHMVVHPAPGNATGT 160
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LVN ILHHC LP++SFP +I SD +DVS+ E +S++ DD+Y E SGL EASIRPGIV
Sbjct: 161 LVNAILHHCCLPVASFPIMEIPSDEDDVSQGEISSYSADDTYLEPSFSGLTEASIRPGIV 220
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAKDEH+HAHLSEQFKQ T+QRVYISLTCGVP P GRV+IPI RDLN
Sbjct: 221 HRLDKGTSGLLVVAKDEHSHAHLSEQFKQRTVQRVYISLTCGVPFPALGRVNIPISRDLN 280
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NRIRMAAV GS KCGK RHAASR+RVIEILAGG ALVEWRLETGRTHQIRAHAKYLGIP
Sbjct: 281 NRIRMAAVVGSGKCGKTRHAASRFRVIEILAGGGCALVEWRLETGRTHQIRAHAKYLGIP 340
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGTKS+AL LQQKN S+L G+LLQL+S LERPCLHALTLGFMHPHT +V F
Sbjct: 341 LLGDEVYGGTKSLALDRLQQKNSSNLPGKLLQLISNLERPCLHALTLGFMHPHTRKQVHF 400
Query: 901 SHLPPEDFAEVLSRLRAISTEKLINREK 984
S LPP DFAEVLS LR+++TEK++N E+
Sbjct: 401 SCLPPVDFAEVLSVLRSVNTEKIMNMEE 428
>gb|KZM89696.1| hypothetical protein DCAR_022941 [Daucus carota subsp. sativus]
Length = 429
Score = 511 bits (1316), Expect = e-177
Identities = 251/323 (77%), Positives = 282/323 (87%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSH +++GD+VSC ISEL LKA+P+DIPLDI+YEDDH+LVVNKP HMVVHPAPGNA GT
Sbjct: 97 VSHKLKSGDKVSCTISELQPLKAQPQDIPLDILYEDDHLLVVNKPPHMVVHPAPGNATGT 156
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LVN ILHHC LP++SFP +I SD +DVS+ E +S++ DD+Y E SGL EASIRPGIV
Sbjct: 157 LVNAILHHCCLPVASFPIMEIPSDEDDVSQGEISSYSADDTYLEPSFSGLTEASIRPGIV 216
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAKDEH+HAHLSEQFKQ T+QRVYISLTCGVP P GRV+IPI RDLN
Sbjct: 217 HRLDKGTSGLLVVAKDEHSHAHLSEQFKQRTVQRVYISLTCGVPFPALGRVNIPISRDLN 276
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NRIRMAAV GS KCGK RHAASR+RVIEILAGG ALVEWRLETGRTHQIRAHAKYLGIP
Sbjct: 277 NRIRMAAVVGSGKCGKTRHAASRFRVIEILAGGGCALVEWRLETGRTHQIRAHAKYLGIP 336
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGTKS+AL LQQKN S+L G+LLQL+S LERPCLHALTLGFMHPHT +V F
Sbjct: 337 LLGDEVYGGTKSLALDRLQQKNSSNLPGKLLQLISNLERPCLHALTLGFMHPHTRKQVHF 396
Query: 901 SHLPPEDFAEVLSRLRAISTEKL 969
S LPP DFAEVLS LR+++TEK+
Sbjct: 397 SCLPPVDFAEVLSVLRSVNTEKV 419
>ref|XP_019186766.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Ipomoea nil]
Length = 453
Score = 509 bits (1310), Expect = e-175
Identities = 244/323 (75%), Positives = 283/323 (87%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSHTV+ GD+V+C I+EL L AEPED+PLDIVYEDDHVLVVNKPAHMVVHPAPGN GT
Sbjct: 130 VSHTVKRGDKVNCTIAELQPLTAEPEDMPLDIVYEDDHVLVVNKPAHMVVHPAPGNPTGT 189
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LVNGILHHCSLP++SFP Q++ SD E + E ++F+ + Y G S + EASIRPGIV
Sbjct: 190 LVNGILHHCSLPVASFPYQEVLSDGEAALDDELSTFSSEQDYVGGDYSAIGEASIRPGIV 249
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAKDE++HAHL+EQFK+H+I+RVY++LTCGVP+P +GR+DIPIGRD N
Sbjct: 250 HRLDKGTSGLLVVAKDEYSHAHLAEQFKKHSIKRVYVALTCGVPTPASGRIDIPIGRDPN 309
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NR+RMAA++G +K GK RHAASRY+VIEILAGG SALVEWRLETGRTHQIRAHAKYLGIP
Sbjct: 310 NRLRMAAISGFSKNGKTRHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIP 369
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGTKSMAL+LLQQ+NPS HG+LLQL+SRLERPCLHALTLGF HP TG+ V F
Sbjct: 370 LLGDEVYGGTKSMALSLLQQRNPSEFHGKLLQLISRLERPCLHALTLGFRHPKTGENVHF 429
Query: 901 SHLPPEDFAEVLSRLRAISTEKL 969
+ LPP DFAEVLS LR ISTEK+
Sbjct: 430 TQLPPTDFAEVLSDLRTISTEKV 452
>ref|XP_018808134.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Juglans regia]
Length = 446
Score = 493 bits (1269), Expect = e-169
Identities = 242/322 (75%), Positives = 278/322 (86%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSH V+ GD+V+C ISEL L+A PEDIPLDIV+ED+HVLVVNKPAHMVVHPAPGNA GT
Sbjct: 120 VSHNVKTGDKVNCTISELQPLRAVPEDIPLDIVFEDEHVLVVNKPAHMVVHPAPGNATGT 179
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LVNG+LHHCS P+ +F N+++ SDAED+S+ E +SF+ + ++GL S + ASIRPGIV
Sbjct: 180 LVNGVLHHCSPPVVAFSNEEVLSDAEDISDDELSSFSAGQNPNDGLYSRRSGASIRPGIV 239
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAKDEH+HA+LSEQFK HTIQR+Y+SLT GVPSP AGRV++PIGRDLN
Sbjct: 240 HRLDKGTSGLLVVAKDEHSHANLSEQFKLHTIQRLYVSLTSGVPSPMAGRVEVPIGRDLN 299
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NRIRMAA+ GSN +ARHAASRY+VIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP
Sbjct: 300 NRIRMAAIPGSNISRQARHAASRYKVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 359
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGTKSMAL+LL+ + P S HGQLLQLVSRLERPCLHAL LGFMHPHT + V F
Sbjct: 360 LLGDEVYGGTKSMALSLLRPRTPPSRHGQLLQLVSRLERPCLHALALGFMHPHTMENVYF 419
Query: 901 SHLPPEDFAEVLSRLRAISTEK 966
PP DFAE+L +LR I T K
Sbjct: 420 QCPPPADFAEILGQLRKIGTVK 441
>ref|XP_023875750.1| LOW QUALITY PROTEIN: RNA pseudouridine synthase 2, chloroplastic
[Quercus suber]
Length = 443
Score = 486 bits (1250), Expect = e-166
Identities = 240/322 (74%), Positives = 277/322 (86%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSH V+AGD V+C ISEL L+AEPE+IPLDIV+ED+HVLVVNKPAHMVVHPAPGNA+GT
Sbjct: 121 VSHNVKAGDMVNCTISELQPLRAEPENIPLDIVFEDEHVLVVNKPAHMVVHPAPGNASGT 180
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LVNGILHHCSLP ++F N++I SDAED+S+ + ++ D L ++ ASIRPGIV
Sbjct: 181 LVNGILHHCSLPFAAFSNEEILSDAEDISDDDLST----DKSPNELNFSISGASIRPGIV 236
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAKDEH+HAHLSEQFK HTIQRVYISLT G+PSPTAGRV++PIGRD+N
Sbjct: 237 HRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIQRVYISLTSGIPSPTAGRVEVPIGRDVN 296
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NRIRMAA+ S C +ARHAASRY+VIEILAGG SALVEWRLETGRTHQIRAHAKYLGIP
Sbjct: 297 NRIRMAAIPXSYNCRQARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIP 356
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGTK+MAL+LL+ + +S HGQLLQLVS LERPCLHAL LGF HPHT + V+F
Sbjct: 357 LLGDEVYGGTKNMALSLLRPRTAASHHGQLLQLVSGLERPCLHALALGFKHPHTMENVNF 416
Query: 901 SHLPPEDFAEVLSRLRAISTEK 966
S PP DFAE+LS+LR I T+K
Sbjct: 417 SCPPPADFAEILSQLRKIGTQK 438
>ref|XP_022855455.1| RNA pseudouridine synthase 2, chloroplastic isoform X3 [Olea
europaea var. sylvestris]
Length = 351
Score = 479 bits (1233), Expect = e-165
Identities = 230/322 (71%), Positives = 269/322 (83%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSH VR GD V+C I +L L+AE EDIPLDIVYEDDH+LVVNKPAHMVVHPAPGNA GT
Sbjct: 6 VSHVVREGDMVNCTIEQLQPLRAEAEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNATGT 65
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LVNGILHHC L SF N ++ DA+D S+ EF + + D Y+ G+ SGL EAS+RPGIV
Sbjct: 66 LVNGILHHCRLSTVSFSNPEVLHDADDASDDEFCALSSDQDYNGGISSGLYEASVRPGIV 125
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAKDE++HAHL+EQFK+HTI+RVY+S+TCGVPSPT GR++IPIGRDLN
Sbjct: 126 HRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSVTCGVPSPTCGRIEIPIGRDLN 185
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NR+RM A G N KAR+AASRY+VIEILA G ALVEWRLETGRTHQIRAHAKYLG+P
Sbjct: 186 NRLRMIAAPGLNTRQKARYAASRYQVIEILACGGCALVEWRLETGRTHQIRAHAKYLGVP 245
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGTKSMAL+LLQ +NPSS G ++LV+R+ERPCLHAL+LGF HP+TG+ V F
Sbjct: 246 LLGDEVYGGTKSMALSLLQSRNPSSFRGLFVELVARIERPCLHALSLGFQHPNTGENVHF 305
Query: 901 SHLPPEDFAEVLSRLRAISTEK 966
S +PP DF E+L +LR I EK
Sbjct: 306 SQIPPADFTEILGQLRDIRAEK 327
>ref|XP_010320443.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Solanum lycopersicum]
Length = 431
Score = 481 bits (1238), Expect = e-165
Identities = 231/324 (71%), Positives = 275/324 (84%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSH V+ GD+V C I++L L+AEPEDIPLDIVYED+HVLVVNKPAHMVVHPAPGNA GT
Sbjct: 108 VSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGT 167
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LV+GILHHCSLP SFP +++ SD ED S+ E N F+P+ S + S + E+S+RPGIV
Sbjct: 168 LVSGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIV 227
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAK+EH+ A L+EQFK+HTI+RVY+S+TCGVP+ AGRVDIPIGRD N
Sbjct: 228 HRLDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSN 287
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NRIRMAA+ G+ K GK+RHA SRY+VIE LAGG SALVEWRLETGRTHQIRAHAK+LGIP
Sbjct: 288 NRIRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIP 347
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
L+GDEVYGGTK+MAL+LLQ K P HG+L QLVS+++RPCLHALTLGF HP TG+ + F
Sbjct: 348 LMGDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHF 407
Query: 901 SHLPPEDFAEVLSRLRAISTEKLI 972
+ LPP DFAE+LS LRAI TEK++
Sbjct: 408 TRLPPPDFAEILSELRAIKTEKVL 431
>ref|XP_003634352.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Vitis vinifera]
emb|CBI18920.3| unnamed protein product, partial [Vitis vinifera]
Length = 433
Score = 481 bits (1238), Expect = e-165
Identities = 245/330 (74%), Positives = 276/330 (83%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSH +RAGD+V+C ISEL L+AEPEDIPLDIVYED+HVLVVNKPAHMVVHPAPGNA+GT
Sbjct: 114 VSHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGT 173
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LVNGILHHCSLP + PN+D S+ +D+S+ EFNSFA G G E +IRPGIV
Sbjct: 174 LVNGILHHCSLPTVALPNRD--SEEDDISDDEFNSFAA------GQNCGTCETNIRPGIV 225
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAKDEH+HAHLSEQFK H+I RVYISLT GVP+P +GRV+IP+GRD N
Sbjct: 226 HRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPN 285
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NRIRM AV G + G+ARHAASRY+VIEILA G SALVEWRLETGRTHQIRAHAKYLGIP
Sbjct: 286 NRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIP 345
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGTK+MAL+LL+ + PSS HGQL QLVSRL+RPCLHA+ LGF HP TG V F
Sbjct: 346 LLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHF 405
Query: 901 SHLPPEDFAEVLSRLRAISTEKLINREKGL 990
S PPEDFAE+LS LR ISTEK +KGL
Sbjct: 406 SCQPPEDFAEILSWLRKISTEK----KKGL 431
>ref|XP_004238386.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Solanum lycopersicum]
Length = 436
Score = 480 bits (1236), Expect = e-164
Identities = 231/323 (71%), Positives = 274/323 (84%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSH V+ GD+V C I++L L+AEPEDIPLDIVYED+HVLVVNKPAHMVVHPAPGNA GT
Sbjct: 108 VSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGT 167
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LV+GILHHCSLP SFP +++ SD ED S+ E N F+P+ S + S + E+S+RPGIV
Sbjct: 168 LVSGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIV 227
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAK+EH+ A L+EQFK+HTI+RVY+S+TCGVP+ AGRVDIPIGRD N
Sbjct: 228 HRLDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSN 287
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NRIRMAA+ G+ K GK+RHA SRY+VIE LAGG SALVEWRLETGRTHQIRAHAK+LGIP
Sbjct: 288 NRIRMAAIPGTPKSGKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIP 347
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
L+GDEVYGGTK+MAL+LLQ K P HG+L QLVS+++RPCLHALTLGF HP TG+ + F
Sbjct: 348 LMGDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHF 407
Query: 901 SHLPPEDFAEVLSRLRAISTEKL 969
+ LPP DFAE+LS LRAI TEK+
Sbjct: 408 TRLPPPDFAEILSELRAIKTEKV 430
>ref|XP_023755389.1| RNA pseudouridine synthase 2, chloroplastic isoform X1 [Lactuca
sativa]
Length = 461
Score = 481 bits (1238), Expect = e-164
Identities = 234/323 (72%), Positives = 272/323 (84%)
Frame = +1
Query: 4 SHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTL 183
SH +R GD+V C ISEL LKAE EDIPLDIVYED+HVLVVNKPAHMVVHPAPGN GTL
Sbjct: 125 SHMIRHGDKVECTISELQPLKAESEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNTTGTL 184
Query: 184 VNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIVH 363
VNGILHHCSLP SF +Q++ SD++++S+ E + + ++ G NE S+RPGIVH
Sbjct: 185 VNGILHHCSLPTPSFHDQELVSDSDELSDIELDESPLNHTF------GTNETSVRPGIVH 238
Query: 364 RLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLNN 543
RLDKGTSGL+VVAKDEH+HAHLS+QFK+HTIQR+YISLTCG+P P +GRVDIPIGRDL N
Sbjct: 239 RLDKGTSGLLVVAKDEHSHAHLSQQFKEHTIQRIYISLTCGIPFPPSGRVDIPIGRDLTN 298
Query: 544 RIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPL 723
RIRM A G KCGK+R+AASRY+V+EILAGG SALVEWRLETGRTHQIRAHAKYLGIPL
Sbjct: 299 RIRMTADTGPTKCGKSRYAASRYKVVEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPL 358
Query: 724 LGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSFS 903
+GDEVYGGTK+MA++ LQ KN S LHGQL +LV+++ RPCLHALTLGF HP TG+K+ FS
Sbjct: 359 MGDEVYGGTKNMAISRLQLKNSSKLHGQLSELVAKVNRPCLHALTLGFTHPCTGEKMQFS 418
Query: 904 HLPPEDFAEVLSRLRAISTEKLI 972
LPP DFAEVL+ LR IST KLI
Sbjct: 419 CLPPVDFAEVLTGLRNISTHKLI 441
>ref|XP_016493442.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
[Nicotiana tabacum]
Length = 431
Score = 479 bits (1233), Expect = e-164
Identities = 233/324 (71%), Positives = 273/324 (84%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSHTV+ GD+V+C I++L L+AEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGN GT
Sbjct: 108 VSHTVKGGDKVNCTIADLKPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNVTGT 167
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LV+GILHHCSLP SFP +++ SD ED S E N F+ D S + S + E SIRPGIV
Sbjct: 168 LVSGILHHCSLPTISFPGEEVLSDVEDASGDELNMFSADQSPNGVDASRMYEPSIRPGIV 227
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAK E + A+L+EQFK+HTI+RVY+S+TCGVP+ +GR+DIPIGRD N
Sbjct: 228 HRLDKGTSGLLVVAKTEQSLANLAEQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSN 287
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NRIRM A+ GS+K G+AR+AASRY+VIE LAGG SALVEWRLETGRTHQIRAHAKYLGIP
Sbjct: 288 NRIRMVAIPGSHKGGRARNAASRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIP 347
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGTK+MAL+LLQ K P HG L QL+S +ERPCLHALTLGF HP+TG+ + F
Sbjct: 348 LLGDEVYGGTKNMALSLLQPKTPPRSHGNLSQLISGIERPCLHALTLGFRHPYTGENIHF 407
Query: 901 SHLPPEDFAEVLSRLRAISTEKLI 972
+ LPP DFAEVL+ LRAISTEK++
Sbjct: 408 TRLPPADFAEVLTELRAISTEKVL 431
>ref|XP_009620048.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana
tomentosiformis]
Length = 431
Score = 479 bits (1233), Expect = e-164
Identities = 233/324 (71%), Positives = 273/324 (84%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSHTV+ GD+V+C I++L L+AEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGN GT
Sbjct: 108 VSHTVKGGDKVNCTIADLKPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNVTGT 167
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LV+GILHHCSLP SFP +++ SD ED S E N F+ D S + S + E SIRPGIV
Sbjct: 168 LVSGILHHCSLPTISFPGEEVLSDVEDASGDELNMFSADQSPNGVDASRMYEPSIRPGIV 227
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAK E + A+L+EQFK+HTI+RVY+S+TCGVP+ +GR+DIPIGRD N
Sbjct: 228 HRLDKGTSGLLVVAKTEQSLANLAEQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSN 287
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NRIRM A+ GS+K G+AR+AASRY+VIE LAGG SALVEWRLETGRTHQIRAHAKYLGIP
Sbjct: 288 NRIRMVAIPGSHKGGRARNAASRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIP 347
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGTK+MAL+LLQ K P HG L QL+S +ERPCLHALTLGF HP+TG+ + F
Sbjct: 348 LLGDEVYGGTKNMALSLLQPKTPPRSHGNLSQLISGIERPCLHALTLGFRHPYTGENIHF 407
Query: 901 SHLPPEDFAEVLSRLRAISTEKLI 972
+ LPP DFAEVL+ LRAISTEK++
Sbjct: 408 TRLPPADFAEVLTELRAISTEKVL 431
>gb|KVI07293.1| Pseudouridine synthase, catalytic domain-containing protein [Cynara
cardunculus var. scolymus]
Length = 435
Score = 479 bits (1233), Expect = e-164
Identities = 236/319 (73%), Positives = 269/319 (84%)
Frame = +1
Query: 4 SHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTL 183
SH VR GD+V C ISEL LKAE EDI LDIVYED+HVLVVNKPAHMVVHPAPGN GTL
Sbjct: 119 SHMVRHGDKVECTISELQPLKAEGEDIALDIVYEDEHVLVVNKPAHMVVHPAPGNTTGTL 178
Query: 184 VNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIVH 363
VNGILHHCSLP SF +Q++ SD++D+ + E + + + S+ G NE S+RPGIVH
Sbjct: 179 VNGILHHCSLPTPSFQDQELLSDSDDLDDIELDEPFINQTDSKDFSFGTNETSVRPGIVH 238
Query: 364 RLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLNN 543
RLDKGTSGL+VVAKDEH+HAHLS+QFKQHTIQR+Y+SLTCGVPSP +GRVDIPIGRDL N
Sbjct: 239 RLDKGTSGLLVVAKDEHSHAHLSQQFKQHTIQRIYVSLTCGVPSPASGRVDIPIGRDLTN 298
Query: 544 RIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPL 723
RIRM A G KCGK+R+AAS RV+EILAGG SALVEW+LETGRTHQIRAHAKYLGIPL
Sbjct: 299 RIRMVADTGPTKCGKSRYAAS--RVVEILAGGGSALVEWKLETGRTHQIRAHAKYLGIPL 356
Query: 724 LGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSFS 903
+GDEVYGGTK+MALA L KNPSSLHGQL Q+VS+L+RPCLHALTLGF HP TG+K+ FS
Sbjct: 357 MGDEVYGGTKNMALARLHPKNPSSLHGQLSQIVSKLDRPCLHALTLGFTHPCTGEKMQFS 416
Query: 904 HLPPEDFAEVLSRLRAIST 960
LPP DFAE+L+ LR IST
Sbjct: 417 CLPPVDFAELLTGLRNIST 435
>gb|OVA15944.1| RNA-binding S4 domain [Macleaya cordata]
Length = 458
Score = 480 bits (1235), Expect = e-164
Identities = 233/318 (73%), Positives = 269/318 (84%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSH +RAGD+V+C ISEL L+AEPEDIPLDIVYED HVLVVNKPA+MVVHPAPGN NGT
Sbjct: 122 VSHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDAHVLVVNKPANMVVHPAPGNPNGT 181
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LVNGILHHC LP+ S PN ++ S+ D+S+ EF SF+ D SYSE + S A +RPGIV
Sbjct: 182 LVNGILHHCRLPIVSSPNSEMLSETGDISDEEFESFSSDQSYSEEVSSSSCAALVRPGIV 241
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAKDEH+HA LSEQFKQHTI RVY+SLT GVPSPT+GR++IPIGRD+N
Sbjct: 242 HRLDKGTSGLLVVAKDEHSHAQLSEQFKQHTIHRVYVSLTSGVPSPTSGRIEIPIGRDVN 301
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NR+RM AV+G N ++R+AASRYRVIE+LA G SALVEWRLETGRTHQIRAHAKYLGIP
Sbjct: 302 NRLRMTAVSGPNNSRQSRYAASRYRVIEVLADGGSALVEWRLETGRTHQIRAHAKYLGIP 361
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGTK MAL+LL+ K PS+ HG L +LV++LERPCLHA TLGF HPHTG+ V+F
Sbjct: 362 LLGDEVYGGTKGMALSLLRPKTPSNNHGHLSELVNKLERPCLHAFTLGFKHPHTGEVVNF 421
Query: 901 SHLPPEDFAEVLSRLRAI 954
S PP DF E+LS LR I
Sbjct: 422 SCPPPADFTEILSLLRNI 439
>ref|XP_022855454.1| RNA pseudouridine synthase 2, chloroplastic isoform X2 [Olea europaea
var. sylvestris]
Length = 450
Score = 479 bits (1234), Expect = e-164
Identities = 230/323 (71%), Positives = 270/323 (83%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSH VR GD V+C I +L L+AE EDIPLDIVYEDDH+LVVNKPAHMVVHPAPGNA GT
Sbjct: 117 VSHVVREGDMVNCTIEQLQPLRAEAEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNATGT 176
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LVNGILHHC L SF N ++ DA+D S+ EF + + D Y+ G+ SGL EAS+RPGIV
Sbjct: 177 LVNGILHHCRLSTVSFSNPEVLHDADDASDDEFCALSSDQDYNGGISSGLYEASVRPGIV 236
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAKDE++HAHL+EQFK+HTI+RVY+S+TCGVPSPT GR++IPIGRDLN
Sbjct: 237 HRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSVTCGVPSPTCGRIEIPIGRDLN 296
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NR+RM A G N KAR+AASRY+VIEILA G ALVEWRLETGRTHQIRAHAKYLG+P
Sbjct: 297 NRLRMIAAPGLNTRQKARYAASRYQVIEILACGGCALVEWRLETGRTHQIRAHAKYLGVP 356
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGTKSMAL+LLQ +NPSS G ++LV+R+ERPCLHAL+LGF HP+TG+ V F
Sbjct: 357 LLGDEVYGGTKSMALSLLQSRNPSSFRGLFVELVARIERPCLHALSLGFQHPNTGENVHF 416
Query: 901 SHLPPEDFAEVLSRLRAISTEKL 969
S +PP DF E+L +LR I EK+
Sbjct: 417 SQIPPADFTEILGQLRDIRAEKV 439
>ref|XP_009798870.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana
sylvestris]
Length = 431
Score = 479 bits (1232), Expect = e-164
Identities = 234/324 (72%), Positives = 275/324 (84%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSHTV+ GD+V+C I++L L+AEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNA GT
Sbjct: 108 VSHTVKGGDKVNCTIADLKPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGT 167
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LV+GILHHCSLP SFP +++ SD ED S+ E N F+ D S S + E S+RPGIV
Sbjct: 168 LVSGILHHCSLPTVSFPGEEVLSDVEDDSDDELNLFSTDQSPYGVDSSVVCEPSVRPGIV 227
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAK E + A+L+EQFK+HTI+RVY+S+TCGVP+ +GR+DIPIGRD N
Sbjct: 228 HRLDKGTSGLLVVAKTEQSLANLAEQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSN 287
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NRIRM A+ GS+K G+AR+AASRY+VIE LAGG SALVEWRLETGRTHQIRAHAKYLGIP
Sbjct: 288 NRIRMIAIPGSHKGGRARNAASRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIP 347
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGTK+MAL+LLQ K P HG+L QL+S +ERPCLHALTLGF HP+TG+ + F
Sbjct: 348 LLGDEVYGGTKNMALSLLQPKTPPRSHGKLSQLISGIERPCLHALTLGFRHPYTGENIHF 407
Query: 901 SHLPPEDFAEVLSRLRAISTEKLI 972
+ LPP DFAEVLS LRAISTEK++
Sbjct: 408 TRLPPADFAEVLSELRAISTEKVL 431
>ref|XP_023755391.1| RNA pseudouridine synthase 2, chloroplastic isoform X2 [Lactuca
sativa]
Length = 443
Score = 479 bits (1232), Expect = e-164
Identities = 232/322 (72%), Positives = 271/322 (84%)
Frame = +1
Query: 4 SHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTL 183
SH +R GD+V C ISEL LKAE EDIPLDIVYED+HVLVVNKPAHMVVHPAPGN GTL
Sbjct: 125 SHMIRHGDKVECTISELQPLKAESEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNTTGTL 184
Query: 184 VNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIVH 363
VNGILHHCSLP SF +Q++ SD++++S+ E + + ++ G NE S+RPGIVH
Sbjct: 185 VNGILHHCSLPTPSFHDQELVSDSDELSDIELDESPLNHTF------GTNETSVRPGIVH 238
Query: 364 RLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLNN 543
RLDKGTSGL+VVAKDEH+HAHLS+QFK+HTIQR+YISLTCG+P P +GRVDIPIGRDL N
Sbjct: 239 RLDKGTSGLLVVAKDEHSHAHLSQQFKEHTIQRIYISLTCGIPFPPSGRVDIPIGRDLTN 298
Query: 544 RIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPL 723
RIRM A G KCGK+R+AASRY+V+EILAGG SALVEWRLETGRTHQIRAHAKYLGIPL
Sbjct: 299 RIRMTADTGPTKCGKSRYAASRYKVVEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPL 358
Query: 724 LGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSFS 903
+GDEVYGGTK+MA++ LQ KN S LHGQL +LV+++ RPCLHALTLGF HP TG+K+ FS
Sbjct: 359 MGDEVYGGTKNMAISRLQLKNSSKLHGQLSELVAKVNRPCLHALTLGFTHPCTGEKMQFS 418
Query: 904 HLPPEDFAEVLSRLRAISTEKL 969
LPP DFAEVL+ LR IST K+
Sbjct: 419 CLPPVDFAEVLTGLRNISTHKM 440
>ref|XP_022855453.1| RNA pseudouridine synthase 2, chloroplastic isoform X1 [Olea europaea
var. sylvestris]
Length = 462
Score = 479 bits (1233), Expect = e-163
Identities = 230/322 (71%), Positives = 269/322 (83%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSH VR GD V+C I +L L+AE EDIPLDIVYEDDH+LVVNKPAHMVVHPAPGNA GT
Sbjct: 117 VSHVVREGDMVNCTIEQLQPLRAEAEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNATGT 176
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LVNGILHHC L SF N ++ DA+D S+ EF + + D Y+ G+ SGL EAS+RPGIV
Sbjct: 177 LVNGILHHCRLSTVSFSNPEVLHDADDASDDEFCALSSDQDYNGGISSGLYEASVRPGIV 236
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAKDE++HAHL+EQFK+HTI+RVY+S+TCGVPSPT GR++IPIGRDLN
Sbjct: 237 HRLDKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSVTCGVPSPTCGRIEIPIGRDLN 296
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NR+RM A G N KAR+AASRY+VIEILA G ALVEWRLETGRTHQIRAHAKYLG+P
Sbjct: 297 NRLRMIAAPGLNTRQKARYAASRYQVIEILACGGCALVEWRLETGRTHQIRAHAKYLGVP 356
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGTKSMAL+LLQ +NPSS G ++LV+R+ERPCLHAL+LGF HP+TG+ V F
Sbjct: 357 LLGDEVYGGTKSMALSLLQSRNPSSFRGLFVELVARIERPCLHALSLGFQHPNTGENVHF 416
Query: 901 SHLPPEDFAEVLSRLRAISTEK 966
S +PP DF E+L +LR I EK
Sbjct: 417 SQIPPADFTEILGQLRDIRAEK 438
>ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Nelumbo nucifera]
Length = 453
Score = 478 bits (1231), Expect = e-163
Identities = 231/331 (69%), Positives = 274/331 (82%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSH +RAGD+V+C I EL L+AEPEDIPLDIVYED+ VLVVNKPAHMVVHPAPGNANGT
Sbjct: 118 VSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGT 177
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LVNGILHHCSLPM + N + S+ +D+S+ E + F+ E + S + E S+RPGIV
Sbjct: 178 LVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIV 237
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAKDEH+HAHLSEQFK HTI R+Y+SLTCGVPS +GR+++PIGRDL+
Sbjct: 238 HRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLS 297
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NRIRMAAV N +ARHAASRYRV+E+LAGG SALVEWRLETGRTHQIRAHAKYLGIP
Sbjct: 298 NRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIP 357
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGT++MAL+LL+ ++ SS HG L QLVS+L+RPCLHA TLGF HPHTG+ + F
Sbjct: 358 LLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQF 417
Query: 901 SHLPPEDFAEVLSRLRAISTEKLINREKGLH 993
S PP DF EVLS+LR+I EK I + + L+
Sbjct: 418 SCPPPADFTEVLSQLRSIGIEKNILKIQSLN 448
>ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
[Nelumbo nucifera]
Length = 443
Score = 478 bits (1229), Expect = e-163
Identities = 229/326 (70%), Positives = 271/326 (83%)
Frame = +1
Query: 1 VSHTVRAGDEVSCIISELPSLKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGT 180
VSH +RAGD+V+C I EL L+AEPEDIPLDIVYED+ VLVVNKPAHMVVHPAPGNANGT
Sbjct: 118 VSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGT 177
Query: 181 LVNGILHHCSLPMSSFPNQDIFSDAEDVSEAEFNSFAPDDSYSEGLCSGLNEASIRPGIV 360
LVNGILHHCSLPM + N + S+ +D+S+ E + F+ E + S + E S+RPGIV
Sbjct: 178 LVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIV 237
Query: 361 HRLDKGTSGLIVVAKDEHTHAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDLN 540
HRLDKGTSGL+VVAKDEH+HAHLSEQFK HTI R+Y+SLTCGVPS +GR+++PIGRDL+
Sbjct: 238 HRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLS 297
Query: 541 NRIRMAAVAGSNKCGKARHAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIP 720
NRIRMAAV N +ARHAASRYRV+E+LAGG SALVEWRLETGRTHQIRAHAKYLGIP
Sbjct: 298 NRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIP 357
Query: 721 LLGDEVYGGTKSMALALLQQKNPSSLHGQLLQLVSRLERPCLHALTLGFMHPHTGDKVSF 900
LLGDEVYGGT++MAL+LL+ ++ SS HG L QLVS+L+RPCLHA TLGF HPHTG+ + F
Sbjct: 358 LLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQF 417
Query: 901 SHLPPEDFAEVLSRLRAISTEKLINR 978
S PP DF EVLS+LR+I EK + +
Sbjct: 418 SCPPPADFTEVLSQLRSIGIEKPLKK 443