BLASTX nr result

ID: Acanthopanax21_contig00013981 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00013981
         (695 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017256938.1| PREDICTED: B-box zinc finger protein 23-like...    62   7e-08

>ref|XP_017256938.1| PREDICTED: B-box zinc finger protein 23-like [Daucus carota subsp.
           sativus]
 gb|KZM91431.1| hypothetical protein DCAR_021204 [Daucus carota subsp. sativus]
          Length = 243

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
 Frame = +2

Query: 65  IDVSSKRSRENEADLSSKDDFSCSTNNHMITSETAAARRIRGGEDAFVDSLYLRPLKMRK 244
           I++S + S +  ADL+SKD+ S S++ H +   T+      G EDA++DS  LRP K RK
Sbjct: 143 INISPEGSDDFVADLNSKDN-SESSSPHQMDKVTSP-----GDEDAYIDSSSLRPFKFRK 196

Query: 245 --KFEAAGVHHSSGTETIVEALERFHEQNKTCSSNNKASEAVDLDLSECP 388
                 AG         I EAL+R     K C    +  E VDLDL+ECP
Sbjct: 197 LEASRVAGAQKYLSDSRIAEALQR-----KICKGGGEGHECVDLDLNECP 241


Top