BLASTX nr result

ID: Acanthopanax21_contig00012466 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00012466
         (428 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017255666.1| PREDICTED: zinc finger CCCH domain-containin...    62   1e-08
gb|OMO53220.1| hypothetical protein CCACVL1_28802 [Corchorus cap...    56   2e-06
gb|OMP05181.1| Zinc finger, CCCH-type [Corchorus olitorius]            56   2e-06
gb|OIW05573.1| hypothetical protein TanjilG_23359 [Lupinus angus...    55   3e-06
ref|XP_019454352.1| PREDICTED: zinc finger CCCH domain-containin...    55   4e-06
ref|XP_023884783.1| zinc finger CCCH domain-containing protein 1...    55   4e-06
dbj|GAY56679.1| hypothetical protein CUMW_173740 [Citrus unshiu]...    54   4e-06
gb|KDO59308.1| hypothetical protein CISIN_1g041784mg [Citrus sin...    54   8e-06
ref|XP_004505582.1| PREDICTED: zinc finger CCCH domain-containin...    54   9e-06
ref|XP_013590034.1| PREDICTED: zinc finger CCCH domain-containin...    54   1e-05
ref|XP_013590033.1| PREDICTED: zinc finger CCCH domain-containin...    54   1e-05

>ref|XP_017255666.1| PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1
           [Daucus carota subsp. sativus]
          Length = 393

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -3

Query: 417 PRQNGAAGDNSIWLKEEWYPGEIPEEAPPDEFIQ 316
           P+ NG  GDNSIWLKEEW+PGEIPEEAPP EFI+
Sbjct: 361 PKGNGG-GDNSIWLKEEWFPGEIPEEAPPSEFIR 393


>gb|OMO53220.1| hypothetical protein CCACVL1_28802 [Corchorus capsularis]
          Length = 336

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 22/32 (68%), Positives = 29/32 (90%)
 Frame = -3

Query: 411 QNGAAGDNSIWLKEEWYPGEIPEEAPPDEFIQ 316
           +N A+GD+SIWLKE+W PGEIPEEAPPD +++
Sbjct: 305 RNIASGDSSIWLKEKWMPGEIPEEAPPDAYVK 336


>gb|OMP05181.1| Zinc finger, CCCH-type [Corchorus olitorius]
          Length = 404

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 22/32 (68%), Positives = 29/32 (90%)
 Frame = -3

Query: 411 QNGAAGDNSIWLKEEWYPGEIPEEAPPDEFIQ 316
           +N A+GD+SIWLKE+W PGEIPEEAPPD +++
Sbjct: 373 RNIASGDSSIWLKEKWMPGEIPEEAPPDAYVK 404


>gb|OIW05573.1| hypothetical protein TanjilG_23359 [Lupinus angustifolius]
          Length = 271

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = -3

Query: 417 PRQNGAAGDNSIWLKEEWYPGEIPEEAPPDEFIQ 316
           P+    +GD SIWLKE+W PGEIPEEAPPD F++
Sbjct: 238 PQVENVSGDASIWLKEKWNPGEIPEEAPPDAFVR 271


>ref|XP_019454352.1| PREDICTED: zinc finger CCCH domain-containing protein 16 [Lupinus
           angustifolius]
          Length = 387

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = -3

Query: 417 PRQNGAAGDNSIWLKEEWYPGEIPEEAPPDEFIQ 316
           P+    +GD SIWLKE+W PGEIPEEAPPD F++
Sbjct: 354 PQVENVSGDASIWLKEKWNPGEIPEEAPPDAFVR 387


>ref|XP_023884783.1| zinc finger CCCH domain-containing protein 16 isoform X1 [Quercus
           suber]
 gb|POE70223.1| isoform 2 of zinc finger ccch domain-containing protein 16 [Quercus
           suber]
          Length = 389

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 22/32 (68%), Positives = 27/32 (84%)
 Frame = -3

Query: 414 RQNGAAGDNSIWLKEEWYPGEIPEEAPPDEFI 319
           +   A+GD+SIWLKE+W PGEIPEEAPPD F+
Sbjct: 357 QMENASGDSSIWLKEKWNPGEIPEEAPPDGFV 388


>dbj|GAY56679.1| hypothetical protein CUMW_173740 [Citrus unshiu]
 dbj|GAY56680.1| hypothetical protein CUMW_173740 [Citrus unshiu]
          Length = 168

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 23/32 (71%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
 Frame = -3

Query: 411 QNGAA-GDNSIWLKEEWYPGEIPEEAPPDEFI 319
           QNGA  GD S+WLK +W PGEIPEEAPPD F+
Sbjct: 137 QNGAVLGDTSVWLKVKWIPGEIPEEAPPDAFV 168


>gb|KDO59308.1| hypothetical protein CISIN_1g041784mg [Citrus sinensis]
          Length = 233

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 23/32 (71%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
 Frame = -3

Query: 411 QNGAA-GDNSIWLKEEWYPGEIPEEAPPDEFI 319
           QNGA  GD S+WLK +W PGEIPEEAPPD F+
Sbjct: 202 QNGAVLGDTSVWLKVKWIPGEIPEEAPPDAFV 233


>ref|XP_004505582.1| PREDICTED: zinc finger CCCH domain-containing protein 16 [Cicer
           arietinum]
          Length = 375

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = -3

Query: 420 TPRQNGAAGDNSIWLKEEWYPGEIPEEAPPDEFIQ 316
           T +    +GD SIWLKE+W PGEIPEEAPPD F++
Sbjct: 341 TSQVENVSGDVSIWLKEKWNPGEIPEEAPPDRFVR 375


>ref|XP_013590034.1| PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X2
           [Brassica oleracea var. oleracea]
          Length = 387

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = -3

Query: 405 GAAGDNSIWLKEEWYPGEIPEEAPPDEFI 319
           GA  DNSIWLKE+W PGEIPE+APPD F+
Sbjct: 357 GAPVDNSIWLKEKWNPGEIPEQAPPDAFV 385


>ref|XP_013590033.1| PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1
           [Brassica oleracea var. oleracea]
          Length = 402

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = -3

Query: 405 GAAGDNSIWLKEEWYPGEIPEEAPPDEFI 319
           GA  DNSIWLKE+W PGEIPE+APPD F+
Sbjct: 372 GAPVDNSIWLKEKWNPGEIPEQAPPDAFV 400


Top