BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00012233
         (1637 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017242370.1| PREDICTED: putative tRNA pseudouridine synth...   681   0.0  
ref|XP_011080768.1| putative tRNA pseudouridine synthase [Sesamu...   619   0.0  
ref|XP_010650837.1| PREDICTED: putative tRNA pseudouridine synth...   612   0.0  
ref|XP_010650836.1| PREDICTED: putative tRNA pseudouridine synth...   612   0.0  
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   607   0.0  
gb|PIN09232.1| Pseudouridylate synthase [Handroanthus impetigino...   597   0.0  
ref|XP_023873359.1| putative tRNA pseudouridine synthase [Quercu...   596   0.0  
gb|PIN13457.1| Pseudouridylate synthase [Handroanthus impetigino...   594   0.0  
ref|XP_012839130.1| PREDICTED: putative tRNA pseudouridine synth...   585   0.0  
ref|XP_019168348.1| PREDICTED: putative tRNA pseudouridine synth...   582   0.0  
ref|XP_021684709.1| putative tRNA pseudouridine synthase isoform...   580   0.0  
ref|XP_018828438.1| PREDICTED: putative tRNA pseudouridine synth...   578   0.0  
ref|XP_024198208.1| putative tRNA pseudouridine synthase [Rosa c...   577   0.0  
ref|XP_007017040.2| PREDICTED: putative tRNA pseudouridine synth...   576   0.0  
ref|XP_021810503.1| putative tRNA pseudouridine synthase [Prunus...   575   0.0  
ref|XP_007207376.1| putative tRNA pseudouridine synthase [Prunus...   575   0.0  
gb|PON66191.1| Pseudouridine synthase [Trema orientalis]              575   0.0  
gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma ...   574   0.0  
ref|XP_021277897.1| putative tRNA pseudouridine synthase isoform...   573   0.0  
ref|XP_021684705.1| putative tRNA pseudouridine synthase isoform...   573   0.0  

>ref|XP_017242370.1| PREDICTED: putative tRNA pseudouridine synthase [Daucus carota subsp.
            sativus]
 ref|XP_017242371.1| PREDICTED: putative tRNA pseudouridine synthase [Daucus carota subsp.
            sativus]
          Length = 534

 Score =  681 bits (1756), Expect = 0.0
 Identities = 361/536 (67%), Positives = 412/536 (76%), Gaps = 6/536 (1%)
 Frame = -3

Query: 1617 SVVSSLRMAISLMISSPKTSYLRFSNPRLPLVLCFSSSSSPAGINNLKTLDCRDHPH--- 1447
            + +SSLR+A     +SPK  + R  + +L +  CFSSSSS A       LD    P+   
Sbjct: 6    AAISSLRIAFCPAKTSPK--HFRCRSHKLAMC-CFSSSSSSAS-----ELDNLPAPYYLP 57

Query: 1446 --KWEPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNL 1273
              KW+PFRKKKVVMRVGY+GTDYRGLQKQ D+  LSTIEGELE A+YKAGGIRDSNFGNL
Sbjct: 58   NTKWDPFRKKKVVMRVGYIGTDYRGLQKQPDQPSLSTIEGELEIALYKAGGIRDSNFGNL 117

Query: 1272 HKIGWARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSIRVFSIL 1093
            HKIGW RSSRTDKGVHSLATMISLKMEIP YAWKED +GISLANHINSYLP SIRVFS+L
Sbjct: 118  HKIGWGRSSRTDKGVHSLATMISLKMEIPVYAWKEDPNGISLANHINSYLPRSIRVFSVL 177

Query: 1092 PSKRSFDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNY 913
            PS+RSFDARRECNIRKYSYLLPAEIIGI++ L AAEID HL++F +ILSSFEGEHPFHNY
Sbjct: 178  PSQRSFDARRECNIRKYSYLLPAEIIGIKDTLSAAEIDCHLTEFTNILSSFEGEHPFHNY 237

Query: 912  TIRSKYRKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXELE-TIV 736
            TIRSKYRK  SA++S K G GS+ ARLSNE+ D +                    E    
Sbjct: 238  TIRSKYRKPSSARDSSKTGSGSKIARLSNEVLDPEKEDYDEEKEATNFDVEEGGKEINTQ 297

Query: 735  ANEVLGTNVEGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRI 556
             ++ L T+VEG NSKFSRF    KL+ G+ D   N  +D+ PL A  ARWLYEPD+KD++
Sbjct: 298  KSDALATDVEGMNSKFSRFNKPGKLISGLCDSPNNDSHDQYPLSACQARWLYEPDKKDKL 357

Query: 555  SASHFRKIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLPRDILE 376
            SASHFRKIFHCSCGKL+ ++ +SYVEISI GESFMLHQIRKMVGTAVAVKR LLPRDIL 
Sbjct: 358  SASHFRKIFHCSCGKLERILDISYVEISIYGESFMLHQIRKMVGTAVAVKRDLLPRDILM 417

Query: 375  LSLNKFSRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISV 196
            LSLNKFSRIVLPLAPSE LILRGN+FVLRNQ GNVTRP             LVD+FY+S+
Sbjct: 418  LSLNKFSRIVLPLAPSEPLILRGNDFVLRNQSGNVTRPELQTLVESEEILKLVDDFYMSL 477

Query: 195  VLPQVSKFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQSGSNAMS 28
            V+P+VS FLN  KSPW +WV LLDANTGIPDSQ+DEVRNAW++WKE FQ  +N MS
Sbjct: 478  VVPEVSNFLNISKSPWREWVALLDANTGIPDSQLDEVRNAWQLWKETFQHRTNDMS 533


>ref|XP_011080768.1| putative tRNA pseudouridine synthase [Sesamum indicum]
          Length = 561

 Score =  619 bits (1596), Expect = 0.0
 Identities = 326/535 (60%), Positives = 395/535 (73%), Gaps = 5/535 (0%)
 Frame = -3

Query: 1635 SITITMSVVSSLRMAISLMISSPKTSYLRFSNPR--LPL---VLCFSSSSSPAGINNLKT 1471
            S + T  VVS LR+ IS    +P T+     NP    PL   +LC S+S S A    + +
Sbjct: 40   SRSCTTMVVSFLRLPISPWWVTPFTTNFSLQNPTNCKPLKACILCLSTSFS-AATTQVTS 98

Query: 1470 LDCRDHPHKWEPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRD 1291
            L+      KWEPFRKKKVVMRVGYVG+DYRGLQ Q DEH LSTIEGELE AI+KAGGIRD
Sbjct: 99   LEAA---RKWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRD 155

Query: 1290 SNFGNLHKIGWARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSI 1111
            SNFG+LHKIGWARSSRTDKGVHSLATMISLK+EIPE+AW  D +G +L +++NS+LP++I
Sbjct: 156  SNFGDLHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALVSYVNSHLPENI 215

Query: 1110 RVFSILPSKRSFDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGE 931
            RVFSILPS+RSFDARREC+IRKYSYLLPAEIIG++ N  A E+D HLSDFNDIL++FEGE
Sbjct: 216  RVFSILPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTADEVDNHLSDFNDILNTFEGE 275

Query: 930  HPFHNYTIRSKYRKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXE 751
            HPFHNYTIRSKYRKQ+    S   G   +RA  SN    +++                  
Sbjct: 276  HPFHNYTIRSKYRKQLQRGSSGN-GCVLKRATPSNMQGGSELEESDEE------------ 322

Query: 750  LETIVANEVLGTNVEGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPD 571
             +T  ANE L T   G+    S    + + + G+ DE K     +N +  + ARWL+EPD
Sbjct: 323  -DTHEANESLATEF-GETKTDSLLPSSGRTLAGLFDEDKANSKGQNLIVPVCARWLHEPD 380

Query: 570  EKDRISASHFRKIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLP 391
            ++DR+SASHFRKIF C CGKL+ L G++YVEISICGESFMLHQIRKMVGTA+A+KR LLP
Sbjct: 381  DRDRLSASHFRKIFQCRCGKLEQLSGLNYVEISICGESFMLHQIRKMVGTAIAIKRNLLP 440

Query: 390  RDILELSLNKFSRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDE 211
            RDIL+LSL+KFSRIVLPLAPSE+LILRGNNFV+R +PGN+TRP             LVD+
Sbjct: 441  RDILQLSLSKFSRIVLPLAPSEVLILRGNNFVIRKRPGNITRPEMLTLVESEEILKLVDD 500

Query: 210  FYISVVLPQVSKFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQS 46
            FY SV+LPQ+S+FL+P  SPW DWVE+LDANTGIP++Q+ EVRNAW++WKE FQS
Sbjct: 501  FYNSVMLPQLSRFLDPSNSPWNDWVEILDANTGIPETQLIEVRNAWKLWKEEFQS 555


>ref|XP_010650837.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Vitis
            vinifera]
          Length = 516

 Score =  612 bits (1579), Expect = 0.0
 Identities = 324/533 (60%), Positives = 394/533 (73%), Gaps = 4/533 (0%)
 Frame = -3

Query: 1614 VVSSLRMAISLMISSPKTSYLRFSNPR-LPL--VLCFSSSSSPAGINNLKTLDCRDHPHK 1444
            VVSSLR  +   I S  TS LRFSNPR LP   + C SSSSS    +N           K
Sbjct: 2    VVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTESNPD-----QSVQK 56

Query: 1443 WEPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNLHKI 1264
            WE FRKKKVVMRVGYVGT+YRGLQ Q DE  LSTIEGELE A++KAGGIRDSN+GNLHKI
Sbjct: 57   WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKI 116

Query: 1263 GWARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSIRVFSILPSK 1084
            GW RSSRTDKGVHSLATMISLKMEIP  AWKED +GI+LAN++N +LP++I+VFSILPS+
Sbjct: 117  GWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQ 176

Query: 1083 RSFDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNYTIR 904
            RSFDARREC++R+YSYLLPAEIIGI++N  A+EID H+++FNDIL++FEGEHPF NYTIR
Sbjct: 177  RSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIR 236

Query: 903  SKYRKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXELETIVANEV 724
            SKYRKQ  AK+SP  G   RRA+ S E S ++                    E    N V
Sbjct: 237  SKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGE-------------ENSGINGV 283

Query: 723  LGTNV-EGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRISAS 547
            + ++  EG+N   S      +  +G  + ++ GL +++P   + ARWL+ PDE+DRISAS
Sbjct: 284  ISSDYDEGENQNSSESTSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISAS 343

Query: 546  HFRKIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLPRDILELSL 367
            HFRKIF+CSCGKL+  +G+ YVE+SICGESFMLHQIRKMVGTA+AVKR LLPRDIL LSL
Sbjct: 344  HFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSL 403

Query: 366  NKFSRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISVVLP 187
             KFSRIVLPLAPSE+LILRGN+F +R +PGNV RP              VDEFY SV+LP
Sbjct: 404  TKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILP 463

Query: 186  QVSKFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQSGSNAMS 28
            QVSKFL+P KSPW DW+E L  ++ IP++++D+VR AW++WKENF+S +  MS
Sbjct: 464  QVSKFLDPSKSPWHDWLENLTLSS-IPEAELDDVRTAWKLWKENFRSRTKVMS 515


>ref|XP_010650836.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Vitis
            vinifera]
          Length = 520

 Score =  612 bits (1579), Expect = 0.0
 Identities = 324/533 (60%), Positives = 394/533 (73%), Gaps = 4/533 (0%)
 Frame = -3

Query: 1614 VVSSLRMAISLMISSPKTSYLRFSNPR-LPL--VLCFSSSSSPAGINNLKTLDCRDHPHK 1444
            VVSSLR  +   I S  TS LRFSNPR LP   + C SSSSS    +N           K
Sbjct: 2    VVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTESNPD-----QSVQK 56

Query: 1443 WEPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNLHKI 1264
            WE FRKKKVVMRVGYVGT+YRGLQ Q DE  LSTIEGELE A++KAGGIRDSN+GNLHKI
Sbjct: 57   WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKI 116

Query: 1263 GWARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSIRVFSILPSK 1084
            GW RSSRTDKGVHSLATMISLKMEIP  AWKED +GI+LAN++N +LP++I+VFSILPS+
Sbjct: 117  GWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQ 176

Query: 1083 RSFDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNYTIR 904
            RSFDARREC++R+YSYLLPAEIIGI++N  A+EID H+++FNDIL++FEGEHPF NYTIR
Sbjct: 177  RSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIR 236

Query: 903  SKYRKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXELETIVANEV 724
            SKYRKQ  AK+SP  G   RRA+ S E S ++                    E    N V
Sbjct: 237  SKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGE-------------ENSGINGV 283

Query: 723  LGTNV-EGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRISAS 547
            + ++  EG+N   S      +  +G  + ++ GL +++P   + ARWL+ PDE+DRISAS
Sbjct: 284  ISSDYDEGENQNSSESTSFVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISAS 343

Query: 546  HFRKIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLPRDILELSL 367
            HFRKIF+CSCGKL+  +G+ YVE+SICGESFMLHQIRKMVGTA+AVKR LLPRDIL LSL
Sbjct: 344  HFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSL 403

Query: 366  NKFSRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISVVLP 187
             KFSRIVLPLAPSE+LILRGN+F +R +PGNV RP              VDEFY SV+LP
Sbjct: 404  TKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILP 463

Query: 186  QVSKFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQSGSNAMS 28
            QVSKFL+P KSPW DW+E L  ++ IP++++D+VR AW++WKENF+S +  MS
Sbjct: 464  QVSKFLDPSKSPWHDWLENLTLSS-IPEAELDDVRTAWKLWKENFRSRTKVMS 515


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  607 bits (1564), Expect = 0.0
 Identities = 321/527 (60%), Positives = 390/527 (74%), Gaps = 4/527 (0%)
 Frame = -3

Query: 1614 VVSSLRMAISLMISSPKTSYLRFSNPR-LPL--VLCFSSSSSPAGINNLKTLDCRDHPHK 1444
            VVSSLR  +   I S  TS LRFSNPR LP   + C SSSSS    +N           K
Sbjct: 2    VVSSLRFPLFPWIISNHTSNLRFSNPRILPQWSLHCSSSSSSTVTESNPD-----QSVQK 56

Query: 1443 WEPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNLHKI 1264
            WE FRKKKVVMRVGYVGT+YRGLQ Q DE  LSTIEGELE A++KAGGIRDSN+GNLHKI
Sbjct: 57   WESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKI 116

Query: 1263 GWARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSIRVFSILPSK 1084
            GW RSSRTDKGVHSLATMISLKMEIP  AWKED +GI+LAN++N +LP++I+VFSILPS+
Sbjct: 117  GWDRSSRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQ 176

Query: 1083 RSFDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNYTIR 904
            RSFDARREC++R+YSYLLPAEIIGI++N  A+EID H+++FNDIL++FEGEHPF NYTIR
Sbjct: 177  RSFDARRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIR 236

Query: 903  SKYRKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXELETIVANEV 724
            SKYRKQ  AK+SP  G   RRA+ S E S ++                    E    N V
Sbjct: 237  SKYRKQFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGE-------------ENSGVNGV 283

Query: 723  LGTNV-EGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRISAS 547
            + ++  EG+N   S      +  +G  + ++ GL +++    + ARWL+ PDE+DRISAS
Sbjct: 284  ISSDYDEGENQNSSESTSFVEHPVGSSNNNEKGLKEQSSKLVVRARWLHGPDERDRISAS 343

Query: 546  HFRKIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLPRDILELSL 367
            HFRKIF+CSCGKL+  +G+ YVE+SICGESFMLHQIRKMVGTA+AVKR LLPRDIL LSL
Sbjct: 344  HFRKIFNCSCGKLEKFLGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSL 403

Query: 366  NKFSRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISVVLP 187
             KFSRIVLPLAPSE+LILRGN+F +R +PGNV RP              VDEFY SV+LP
Sbjct: 404  TKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILP 463

Query: 186  QVSKFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQS 46
            QVSKFL+P KSPW DW+E L  ++ IP++++D+VR AW++WKENF+S
Sbjct: 464  QVSKFLDPSKSPWHDWLENLTLSS-IPEAELDDVRTAWKLWKENFRS 509


>gb|PIN09232.1| Pseudouridylate synthase [Handroanthus impetiginosus]
          Length = 516

 Score =  597 bits (1539), Expect = 0.0
 Identities = 313/531 (58%), Positives = 383/531 (72%), Gaps = 5/531 (0%)
 Frame = -3

Query: 1611 VSSLRMAISLMISSPKTSYLRF-----SNPRLPLVLCFSSSSSPAGINNLKTLDCRDHPH 1447
            VS LR  IS    +P T+ LRF     + P   +VL FS+SSS         L  +  P 
Sbjct: 3    VSFLRAPISPWWVNPLTTNLRFREHSCNKPLKVIVLRFSTSSSSTATAATNVLQSKTAP- 61

Query: 1446 KWEPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNLHK 1267
            KWEPFRKKKV+MRVGYVG+DYRGLQ Q DE  LSTIEGELE AI+KAGGIRDSNFG+LHK
Sbjct: 62   KWEPFRKKKVIMRVGYVGSDYRGLQIQRDEPALSTIEGELEKAIFKAGGIRDSNFGDLHK 121

Query: 1266 IGWARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSIRVFSILPS 1087
            IGWARSSRTDKGVHSLATMISLKMEIP++AW+ D +G +LA  +NSYLP++IRVFSILPS
Sbjct: 122  IGWARSSRTDKGVHSLATMISLKMEIPDFAWENDPNGFALARCVNSYLPENIRVFSILPS 181

Query: 1086 KRSFDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNYTI 907
            +RSFD RRECNIR+YSYLLP E+IG+++N  A E+D HLSDFNDIL++FEGEHPFHNYT+
Sbjct: 182  QRSFDPRRECNIRRYSYLLPVEVIGVKDNFTAGEVDHHLSDFNDILNTFEGEHPFHNYTV 241

Query: 906  RSKYRKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXELETIVANE 727
            RSKYR++   + S   G  S+R    NE SD +                  + +T   NE
Sbjct: 242  RSKYRRKSYQRGSSANGSVSKRDVSPNEQSDTE-------------SEGSDDKDTNGENE 288

Query: 726  VLGTNVEGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRISAS 547
             L T+    +S     + +D+++  + +  ++ L + N +  + ARWLYEPDEKDR+S S
Sbjct: 289  SLTTDYRETDS-----LCSDRVLAVVNEGDEDSLKEPNLVVPLRARWLYEPDEKDRLSGS 343

Query: 546  HFRKIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLPRDILELSL 367
            HFRKIF C CGKL+ L G++YVEISICGESFMLHQIRKMVGTA+A+KR LLPRDIL LSL
Sbjct: 344  HFRKIFQCCCGKLEQLSGLNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILTLSL 403

Query: 366  NKFSRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISVVLP 187
            +KFSRIVLPLAPSE+LILRGNNF +R +P  +TRP             LV++FY SV+LP
Sbjct: 404  SKFSRIVLPLAPSEVLILRGNNFAIRKRPDKLTRPEMLTLVESEEILKLVNDFYHSVMLP 463

Query: 186  QVSKFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQSGSNA 34
            Q+SKFL+P KSPW DWV +LDANT IP+SQ++EVR AW+ WKE       A
Sbjct: 464  QLSKFLDPSKSPWNDWVAILDANTSIPESQLNEVRIAWKSWKEELDKRKKA 514


>ref|XP_023873359.1| putative tRNA pseudouridine synthase [Quercus suber]
 ref|XP_023873360.1| putative tRNA pseudouridine synthase [Quercus suber]
 gb|POE84706.1| putative trna pseudouridine synthase [Quercus suber]
          Length = 506

 Score =  596 bits (1537), Expect = 0.0
 Identities = 310/529 (58%), Positives = 377/529 (71%), Gaps = 1/529 (0%)
 Frame = -3

Query: 1611 VSSLRMAISL-MISSPKTSYLRFSNPRLPLVLCFSSSSSPAGINNLKTLDCRDHPHKWEP 1435
            +SSLR  +S  ++ +P  S+     P LPL   + S+S+   +             KWEP
Sbjct: 3    LSSLRFPLSPNLLKTPTFSFALLRIPILPLTTPYCSTSTSTPLK------------KWEP 50

Query: 1434 FRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNLHKIGWA 1255
            FRKKKVV+R+GYVGTDYRGLQKQ++EH LSTIE ELE AI+KAGGIRDSN+GNL+KI W 
Sbjct: 51   FRKKKVVLRIGYVGTDYRGLQKQIEEHALSTIENELETAIFKAGGIRDSNYGNLNKIAWG 110

Query: 1254 RSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSIRVFSILPSKRSF 1075
            RSSRTDKGVHSLAT ISLKMEIP+ AWK+D  G++LANHINSYLP++I+VF +LPS+RSF
Sbjct: 111  RSSRTDKGVHSLATTISLKMEIPDNAWKDDPHGLALANHINSYLPENIKVFCVLPSQRSF 170

Query: 1074 DARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNYTIRSKY 895
            D RRECN+RKYSYLLPAEIIGI++  G AE D H+SDF DIL+SFEGEHPFHNYTIRSKY
Sbjct: 171  DPRRECNLRKYSYLLPAEIIGIKSYFGRAEADYHISDFKDILNSFEGEHPFHNYTIRSKY 230

Query: 894  RKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXELETIVANEVLGT 715
            RKQ  AK S   G    RA+ S E S ++                    E +V +  +  
Sbjct: 231  RKQFPAKRSLGNGSVPSRAKSSGEASASEFEESDGE-------------EDVVIDGAIAL 277

Query: 714  NVEGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRISASHFRK 535
            +VE  +   S    + + +    D+HKNG N       + ARWL+EPD+ DRISASHFRK
Sbjct: 278  DVEKMSKNSSESSISQENLANTCDKHKNGHNTN----LVRARWLHEPDDMDRISASHFRK 333

Query: 534  IFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLPRDILELSLNKFS 355
            I  CSCGKL++ +G +Y+E+SI GESFMLHQIRKM+GTAVAVKR LLPRDIL LSL KFS
Sbjct: 334  ISCCSCGKLENSLGFAYIEVSIWGESFMLHQIRKMIGTAVAVKRNLLPRDILTLSLTKFS 393

Query: 354  RIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISVVLPQVSK 175
            RIVLPLAPSE+LILRGN+F LRN+PG+V RP             +VDEFY SV+LP+VSK
Sbjct: 394  RIVLPLAPSEVLILRGNSFTLRNKPGDVKRPEMLTMVESEEILKVVDEFYTSVMLPEVSK 453

Query: 174  FLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQSGSNAMS 28
            FL+P  SPW DWVE LD +T IPD Q+++VR AW++WKE FQS  N  S
Sbjct: 454  FLDPTGSPWKDWVEKLDEHTSIPDVQINDVRKAWKLWKEKFQSSGNVAS 502


>gb|PIN13457.1| Pseudouridylate synthase [Handroanthus impetiginosus]
          Length = 516

 Score =  594 bits (1531), Expect = 0.0
 Identities = 312/531 (58%), Positives = 382/531 (71%), Gaps = 5/531 (0%)
 Frame = -3

Query: 1611 VSSLRMAISLMISSPKTSYLRF-----SNPRLPLVLCFSSSSSPAGINNLKTLDCRDHPH 1447
            VS LR  IS    +P T+ LRF     + P   +VL FS+SSS         L  +  P 
Sbjct: 3    VSFLRAPISPWWVNPLTTNLRFREHSCNKPLKVIVLRFSTSSSSTATAATNVLQSKTAP- 61

Query: 1446 KWEPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNLHK 1267
            KWEPFRKKKV+MRVGYVG+DYRGLQ Q DE  LSTIEGELE AI+KAGGIRDSNFG+LHK
Sbjct: 62   KWEPFRKKKVIMRVGYVGSDYRGLQIQRDEPALSTIEGELEKAIFKAGGIRDSNFGDLHK 121

Query: 1266 IGWARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSIRVFSILPS 1087
            IGWARSSRTDKGVHSLATMISLKMEIP++AW  D +G +LA  +NSYLP++IRVFSILPS
Sbjct: 122  IGWARSSRTDKGVHSLATMISLKMEIPDFAWGNDPNGFALARCVNSYLPENIRVFSILPS 181

Query: 1086 KRSFDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNYTI 907
            +RSFD RRECNIR+YSYLLP E+IG+++N  A E+D HLSDFNDIL++FEGEHPFHNYT+
Sbjct: 182  QRSFDPRRECNIRRYSYLLPVEVIGVKDNFTAGEVDHHLSDFNDILNTFEGEHPFHNYTV 241

Query: 906  RSKYRKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXELETIVANE 727
            RSKYR++   + S   G  S+R    NE SD +                  + +T   NE
Sbjct: 242  RSKYRRKSYQRGSSANGSVSKRDVSPNEQSDTE-------------SEGSDDKDTNGENE 288

Query: 726  VLGTNVEGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRISAS 547
             L T+    +S     + +D+++  + +  ++ L + N +  + ARWLYEPDEKDR+S S
Sbjct: 289  SLTTDYGETDS-----LCSDRVLAVVNEGDEDSLKEPNLVVPLRARWLYEPDEKDRLSGS 343

Query: 546  HFRKIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLPRDILELSL 367
            HFRKIF C CG+L+ L G++YVEISICGESFMLHQIRKMVGTA+A+KR LLPRDIL LSL
Sbjct: 344  HFRKIFQCCCGRLEQLSGLNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILTLSL 403

Query: 366  NKFSRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISVVLP 187
            +KFSRIVLPLAPSE+LILRGNNF +R +P  +TRP             LV++FY SV+LP
Sbjct: 404  SKFSRIVLPLAPSEVLILRGNNFAIRKRPDKLTRPEMLTLVESEEILKLVNDFYHSVMLP 463

Query: 186  QVSKFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQSGSNA 34
            Q+SKFL+P KSPW DWV +LDANT IP+SQ++EVR AW+ WKE       A
Sbjct: 464  QLSKFLDPSKSPWNDWVAILDANTSIPESQLNEVRIAWKSWKEELDKRKKA 514


>ref|XP_012839130.1| PREDICTED: putative tRNA pseudouridine synthase [Erythranthe guttata]
 gb|EYU45681.1| hypothetical protein MIMGU_mgv1a004890mg [Erythranthe guttata]
          Length = 506

 Score =  585 bits (1509), Expect = 0.0
 Identities = 308/502 (61%), Positives = 375/502 (74%)
 Frame = -3

Query: 1557 YLRFSNPRLPLVLCFSSSSSPAGINNLKTLDCRDHPHKWEPFRKKKVVMRVGYVGTDYRG 1378
            YL    P    VL FS+SSS A    ++ +   ++  KWEPFRKKKVVMRVGYVG+DY+G
Sbjct: 22   YLTDFKPFKLSVLGFSTSSSSAAAAAVE-VSPSENADKWEPFRKKKVVMRVGYVGSDYKG 80

Query: 1377 LQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNLHKIGWARSSRTDKGVHSLATMISLK 1198
            LQ Q D+   STIEGELE AIYKAGGIRDSNFG+L+KIGWARSSRTDKGVHSLATMI+LK
Sbjct: 81   LQIQRDQPEFSTIEGELENAIYKAGGIRDSNFGDLNKIGWARSSRTDKGVHSLATMITLK 140

Query: 1197 MEIPEYAWKEDSSGISLANHINSYLPDSIRVFSILPSKRSFDARRECNIRKYSYLLPAEI 1018
            +EIPE AW  D +G +LA ++NSYLP +IRVFSILPS+RSFDARREC+IRKYSYLLPAEI
Sbjct: 141  LEIPESAWNNDPNGFALATYVNSYLPRNIRVFSILPSQRSFDARRECSIRKYSYLLPAEI 200

Query: 1017 IGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNYTIRSKYRKQISAKESPKIGLGSRRA 838
            IG++ N  A+E+D HLSDFNDIL++F+GEHPFHNYT+RSKYRKQ   K S    +G    
Sbjct: 201  IGVKENSTASEVDHHLSDFNDILNTFQGEHPFHNYTVRSKYRKQFPKKGSSASKMGKSLD 260

Query: 837  RLSNEISDAKIXXXXXXXXXXXXXXXXXELETIVANEVLGTNVEGKNSKFSRFIGTDKLM 658
              S  +S+                    E +T V  E L T  E + +K+   +  D+  
Sbjct: 261  VQSEFVSEGS-------------DDEEEEEDTNVVTESLAT--EAEETKYDSLLPKDE-- 303

Query: 657  LGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRISASHFRKIFHCSCGKLKHLIGMSYVE 478
                D+ K     +N +  + ARWL+EPDEKDRISASHFRKIF CSCGKL+ L GM++VE
Sbjct: 304  ---EDQPKK----QNLVSPVLARWLHEPDEKDRISASHFRKIFQCSCGKLEQLSGMNFVE 356

Query: 477  ISICGESFMLHQIRKMVGTAVAVKRGLLPRDILELSLNKFSRIVLPLAPSELLILRGNNF 298
            ISICGESFMLHQIRKMVGTA+AVKR LLPRDIL+LSL+KFSRIV+PLAPSE+LILRGNNF
Sbjct: 357  ISICGESFMLHQIRKMVGTAIAVKRDLLPRDILKLSLSKFSRIVVPLAPSEVLILRGNNF 416

Query: 297  VLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISVVLPQVSKFLNPLKSPWMDWVELLDAN 118
            V+RN+PGN+ RP             LVD+FY SV+LPQ+S FL+P+KSPW +WV+LLDAN
Sbjct: 417  VIRNRPGNIKRPEMLTLVESKEILKLVDDFYYSVMLPQLSVFLDPVKSPWNEWVDLLDAN 476

Query: 117  TGIPDSQMDEVRNAWEIWKENF 52
            T IP+SQ++EVR+AW++W+E F
Sbjct: 477  TCIPESQLEEVRSAWKLWREEF 498


>ref|XP_019168348.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Ipomoea
            nil]
 ref|XP_019168353.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Ipomoea
            nil]
          Length = 518

 Score =  582 bits (1500), Expect = 0.0
 Identities = 308/545 (56%), Positives = 381/545 (69%), Gaps = 16/545 (2%)
 Frame = -3

Query: 1611 VSSLRMAISLMISSP-KTSYLRFSNPRLPLVLCFSSSSS--PAGINNLKTLDC-----RD 1456
            VSSLR++ISL   +P +T        RL L +CF SSSS  P  +    T +       +
Sbjct: 3    VSSLRLSISLRPPTPFRTLQFTIPQKRLTLFVCFCSSSSVAPLSLEPCTTAEVVAPPPSN 62

Query: 1455 HPH-----KWEPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRD 1291
             PH     KWEPFRKKKVVMRVGYVG+DYRGLQ Q D H LSTIEGELE AI+ AGGI+D
Sbjct: 63   APHRISAAKWEPFRKKKVVMRVGYVGSDYRGLQMQRDVHALSTIEGELEKAIFNAGGIKD 122

Query: 1290 SNFGNLHKIGWARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSI 1111
            +NFGNL+KIGWARSSRTDKGVHSLAT+ISLKMEIPE+AWK+D +G+ LA  +NSYLP+SI
Sbjct: 123  TNFGNLYKIGWARSSRTDKGVHSLATVISLKMEIPEHAWKDDPNGMGLATCVNSYLPESI 182

Query: 1110 RVFSILPSKRSFDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGE 931
            RVFSILP +++FDAR+ECN+R+YSYLLPAEIIGI+NN  ++E+D HLSDFN+IL++FEGE
Sbjct: 183  RVFSILPLQKTFDARKECNVRRYSYLLPAEIIGIKNNSTSSEVDCHLSDFNNILNAFEGE 242

Query: 930  HPFHNYTIRSKYRKQISAKESPKIGL---GSRRARLSNEISDAKIXXXXXXXXXXXXXXX 760
            HPFHNYTIRSKYRKQ+  K   K        + A   +E SD                  
Sbjct: 243  HPFHNYTIRSKYRKQLPTKTKKKDNREKPSQKEAMSESEESDVD---------------- 286

Query: 759  XXELETIVANEVLGTNVEGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLY 580
                E+  A +V+ T VE +         T+    G+ D + N L+D+NP+  I ARWLY
Sbjct: 287  ----ESFAAQDVV-TTVEER---------TENTPPGIHD-NMNNLDDQNPILPIRARWLY 331

Query: 579  EPDEKDRISASHFRKIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRG 400
            E D +D++S+SHFRKI HC+CG L+ L GM+YVEI +CGESFMLHQIRKMVGTA+A+KR 
Sbjct: 332  ETDARDKLSSSHFRKILHCNCGNLEQLHGMNYVEICVCGESFMLHQIRKMVGTAIAIKRN 391

Query: 399  LLPRDILELSLNKFSRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXL 220
            LLP D+L+LSLNKFSRIVLPLAPSE+LIL+ N+F  R  PGN+ RP              
Sbjct: 392  LLPLDVLKLSLNKFSRIVLPLAPSEVLILKANSFASRTLPGNIARPEVLRLLESEDILEA 451

Query: 219  VDEFYISVVLPQVSKFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQSGS 40
            VD+FY S +LPQ+S+FL+PL SPW +WV LLDANT IP+ Q++EVR  W  WK   +S  
Sbjct: 452  VDQFYSSTMLPQLSRFLDPLASPWREWVALLDANTSIPECQLEEVRTGWTGWKLQMKSKK 511

Query: 39   NAMST 25
              +ST
Sbjct: 512  KPLST 516


>ref|XP_021684709.1| putative tRNA pseudouridine synthase isoform X2 [Hevea brasiliensis]
          Length = 520

 Score =  580 bits (1495), Expect = 0.0
 Identities = 314/536 (58%), Positives = 380/536 (70%), Gaps = 8/536 (1%)
 Frame = -3

Query: 1611 VSSLRMAIS-LMISSPK-TSYLRFSNP----RLPLVLCFSSSS--SPAGINNLKTLDCRD 1456
            +SSLR+ +S  ++  P+ TS+     P    +L L+ CF  SS  SP     L T    +
Sbjct: 3    ISSLRLPLSPWLVKKPRQTSFESLLMPIFPSKLSLLCCFCGSSLRSP-----LSTSHALN 57

Query: 1455 HPHKWEPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGN 1276
               KW+PFRKKKVV+RVGYVGTDYRGLQKQ DEH LSTIE ELE AI+KAGGI DSN+GN
Sbjct: 58   QSEKWQPFRKKKVVLRVGYVGTDYRGLQKQQDEHSLSTIEAELEHAIFKAGGILDSNYGN 117

Query: 1275 LHKIGWARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSIRVFSI 1096
            L KI WARSSRTDKGVHSLATMI++KMEIPE AWKED  GI+LA H+N+YLPD+IR+FSI
Sbjct: 118  LQKIAWARSSRTDKGVHSLATMITMKMEIPENAWKEDPYGIALAEHVNNYLPDTIRIFSI 177

Query: 1095 LPSKRSFDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHN 916
            LPS++SFD RREC++RKYSYLLPAEIIGI+++   AEID HLSDFNDIL++FEGEHPFHN
Sbjct: 178  LPSQKSFDPRRECDLRKYSYLLPAEIIGIKSHFTTAEIDNHLSDFNDILNAFEGEHPFHN 237

Query: 915  YTIRSKYRKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXELETIV 736
            YTIRSKYRKQ     +PKIG  S+R R S EIS ++I                 +     
Sbjct: 238  YTIRSKYRKQF---PTPKIGRVSKRPRSSGEISASEIEESDQEENYGIDRMIKLDHMEPT 294

Query: 735  ANEVLGTNVEGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRI 556
             N +  T    +NS  S F           +++ + L D+     I ARWL+EPDE DRI
Sbjct: 295  KNSMEST----QNSMESSFY----------NQNGSVLKDQKSNAVIRARWLHEPDETDRI 340

Query: 555  SASHFRKIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLPRDILE 376
             ASHFRKIF CSCGKL+  +G  +VEISI GESFMLHQIRKMV TAVAVKR LLPRDIL 
Sbjct: 341  GASHFRKIFRCSCGKLEKSVGFDFVEISIWGESFMLHQIRKMVATAVAVKRKLLPRDILT 400

Query: 375  LSLNKFSRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISV 196
            LSL KFSRIVLPLAPSE+LILR N+F+ R +PG  +RP             +V++FYI+V
Sbjct: 401  LSLAKFSRIVLPLAPSEVLILRSNSFLFRTRPGVGSRPEMLTMVESEEILKVVNDFYINV 460

Query: 195  VLPQVSKFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQSGSNAMS 28
            +LPQVSKFL+P   PW +WVE LD +T IPD+++DEVR+AW++WKE  QS +N  S
Sbjct: 461  MLPQVSKFLDPCGFPWKEWVEKLDEHTSIPDAELDEVRSAWKVWKEKLQSRTNVAS 516


>ref|XP_018828438.1| PREDICTED: putative tRNA pseudouridine synthase [Juglans regia]
 ref|XP_018828439.1| PREDICTED: putative tRNA pseudouridine synthase [Juglans regia]
 ref|XP_018828440.1| PREDICTED: putative tRNA pseudouridine synthase [Juglans regia]
          Length = 517

 Score =  578 bits (1490), Expect = 0.0
 Identities = 301/530 (56%), Positives = 364/530 (68%), Gaps = 2/530 (0%)
 Frame = -3

Query: 1611 VSSLRMAIS-LMISSPKTSYLRFSNPRLPL-VLCFSSSSSPAGINNLKTLDCRDHPHKWE 1438
            VSSLR  +   +I +P  S+  F  P  P    C SSSSS +  +   +       H WE
Sbjct: 3    VSSLRFPLCPFLIKNPNPSFRLFGIPTSPFRPYCSSSSSSSSSYSASPS-----SAHTWE 57

Query: 1437 PFRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNLHKIGW 1258
               KKKVV+RVGYVGTDYRGLQ Q DEH LSTIE ELE AI+KAGGIRDSNFGNLHKI W
Sbjct: 58   SIHKKKVVLRVGYVGTDYRGLQMQRDEHSLSTIEEELETAIFKAGGIRDSNFGNLHKIAW 117

Query: 1257 ARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSIRVFSILPSKRS 1078
            ARSSRTDKGVHSLAT ISLKMEIPE AWKED  G++LANHIN YLP +I+VFSILPS+R 
Sbjct: 118  ARSSRTDKGVHSLATTISLKMEIPENAWKEDPCGMALANHINYYLPKNIKVFSILPSQRR 177

Query: 1077 FDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNYTIRSK 898
            FD RRECN+RKYSYLLPAEIIGI++     E+D HL D N+IL++FEGEHPFHNYT+RSK
Sbjct: 178  FDPRRECNLRKYSYLLPAEIIGIKSYFSTTEVDHHLLDLNNILNAFEGEHPFHNYTVRSK 237

Query: 897  YRKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXELETIVANEVLG 718
            YRK+   K+S   G   RRA+ S E + A                     +   ++  + 
Sbjct: 238  YRKRFPTKQSHGNGSVPRRAKASGEAASA--------------IDGSDGEDDFQSDGAIA 283

Query: 717  TNVEGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRISASHFR 538
             +VE  +        + +L+    ++H+N L        +HARWL+EPDE DRI ASHFR
Sbjct: 284  LDVERMSKNSLESSVSHELLADTCNKHENDLKSHTTNLVVHARWLHEPDEMDRIGASHFR 343

Query: 537  KIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLPRDILELSLNKF 358
            KIFHCSCGKL+  +G  YVE+SI GESFMLHQIRKMVGTAVAVKR LLPRDIL LSL+KF
Sbjct: 344  KIFHCSCGKLEKSLGFPYVELSIWGESFMLHQIRKMVGTAVAVKRNLLPRDILTLSLSKF 403

Query: 357  SRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISVVLPQVS 178
            SRI+LPLAPSE+LILRGN+F L  +PG+  RP              VD+FY S++ P+VS
Sbjct: 404  SRIILPLAPSEVLILRGNSFSLSKRPGDAMRPEMLAIVESEEILKAVDDFYTSIMFPEVS 463

Query: 177  KFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQSGSNAMS 28
              L+PL SPW +WVE LD +T IPD+++DEVR AW++WKE F+S +   S
Sbjct: 464  NLLDPLGSPWKEWVEKLDEHTSIPDAELDEVRKAWKLWKEKFRSNATVAS 513


>ref|XP_024198208.1| putative tRNA pseudouridine synthase [Rosa chinensis]
 gb|PRQ34723.1| putative pseudouridylate synthase, tRNA pseudouridine(38-40) synthase
            [Rosa chinensis]
          Length = 512

 Score =  577 bits (1486), Expect = 0.0
 Identities = 296/527 (56%), Positives = 369/527 (70%)
 Frame = -3

Query: 1611 VSSLRMAISLMISSPKTSYLRFSNPRLPLVLCFSSSSSPAGINNLKTLDCRDHPHKWEPF 1432
            +SSLR+ +SL +         FSNP++P  L      SP+     +TL       KW+P 
Sbjct: 3    LSSLRLPVSLWLPKHPNQSFHFSNPKIPSRLNLIYCCSPSAATAQQTLT---RTEKWQPV 59

Query: 1431 RKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNLHKIGWAR 1252
            RKKKVV+RVGYVGTDYRGLQ Q D+  +STIE ELE AI+KAGGIR+SNFGNL+KI WAR
Sbjct: 60   RKKKVVLRVGYVGTDYRGLQMQRDDPSISTIEKELETAIFKAGGIRESNFGNLNKIAWAR 119

Query: 1251 SSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSIRVFSILPSKRSFD 1072
            SSRTDKGVHSLATMISLKMEIPE AW  D  GI+L NHIN YLP +I++FS+LP++RSFD
Sbjct: 120  SSRTDKGVHSLATMISLKMEIPENAWDGDPYGIALVNHINCYLPHNIKIFSVLPAQRSFD 179

Query: 1071 ARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNYTIRSKYR 892
             R+ECN+R YSYLLPA++IGI+++   AEID H++DFNDIL++FEGEHPFHNYT+RSKYR
Sbjct: 180  PRKECNLRMYSYLLPADVIGIKSHFSTAEIDDHIADFNDILNAFEGEHPFHNYTVRSKYR 239

Query: 891  KQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXELETIVANEVLGTN 712
            K++S K+SP     S+  R + E S +++                   E     EVL  N
Sbjct: 240  KKLSGKKSPIYRNMSKTERSTVEASASELEGSDDEDEFEG--------ENTTETEVLNQN 291

Query: 711  VEGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRISASHFRKI 532
                   F    G + L+     + ++ L +K+    I A+WLYEPDE DRI ASHFRKI
Sbjct: 292  ------SFLSSNGNENLLKAC-KKQEDVLKEKSTDSVIRAKWLYEPDESDRIGASHFRKI 344

Query: 531  FHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLPRDILELSLNKFSR 352
            F CSCGKL+  +   YVE+SI GESFMLHQIRKMVGTAVA+KR LLPRDIL LSL KFSR
Sbjct: 345  FRCSCGKLEKSLAHEYVELSIWGESFMLHQIRKMVGTAVAIKRKLLPRDILTLSLAKFSR 404

Query: 351  IVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISVVLPQVSKF 172
            ++LPLAPSE+LILRGN F +R +PGNVTRP              VDEF+ SV+LPQV+KF
Sbjct: 405  VILPLAPSEVLILRGNRFSIRERPGNVTRPEMIAMVESEEIIKQVDEFFTSVMLPQVAKF 464

Query: 171  LNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQSGSNAM 31
            L P   PW +W+E LD NTGIPD ++DE+RNAW++WKE F+S ++ +
Sbjct: 465  LEPSGYPWQEWIENLDRNTGIPDIELDELRNAWKVWKERFESDASIL 511


>ref|XP_007017040.2| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Theobroma
            cacao]
          Length = 507

 Score =  576 bits (1484), Expect = 0.0
 Identities = 301/510 (59%), Positives = 365/510 (71%), Gaps = 1/510 (0%)
 Frame = -3

Query: 1554 LRFSNPRLPL-VLCFSSSSSPAGINNLKTLDCRDHPHKWEPFRKKKVVMRVGYVGTDYRG 1378
            L+   PR+ L  LC SS++ P    +           KWEPFRKKKVVMRVGYVGT+YRG
Sbjct: 23   LKLPCPRIQLRFLCSSSTAQPLPPAS----------PKWEPFRKKKVVMRVGYVGTNYRG 72

Query: 1377 LQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNLHKIGWARSSRTDKGVHSLATMISLK 1198
            LQ Q DEH LSTIE ELE AI+KAGGIRDSN+G+LHKI WARSSRTDKGVHSLATMI+LK
Sbjct: 73   LQVQRDEHQLSTIENELETAIFKAGGIRDSNYGDLHKIAWARSSRTDKGVHSLATMITLK 132

Query: 1197 MEIPEYAWKEDSSGISLANHINSYLPDSIRVFSILPSKRSFDARRECNIRKYSYLLPAEI 1018
            MEIPE AWKED +GI+LA  +NSYLPDSI+VFSILPS++SFD RRECN+RKYSYLLPAEI
Sbjct: 133  MEIPEDAWKEDPNGIALAKCVNSYLPDSIKVFSILPSQKSFDPRRECNLRKYSYLLPAEI 192

Query: 1017 IGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNYTIRSKYRKQISAKESPKIGLGSRRA 838
            IGI+++   AEI+ H+SDFN IL+ FEGEHPFHNYT R+KYR+QI  +++ + G   + A
Sbjct: 193  IGIKSHFSEAEINHHISDFNSILNCFEGEHPFHNYTQRAKYRRQIPPRQTARNGRVPKGA 252

Query: 837  RLSNEISDAKIXXXXXXXXXXXXXXXXXELETIVANEVLGTNVEGKNSKFSRFIGTDKLM 658
               +E S +++                   E     E    N E K++ F      D+ +
Sbjct: 253  EAHDESSTSELEESDVE-------------EDPRIEETTTLNSEEKSTSF------DEPL 293

Query: 657  LGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRISASHFRKIFHCSCGKLKHLIGMSYVE 478
            +   D   N L  ++    + ARWLYEPDE DRI+ASHFRKIF CSCG+L++ +G  Y+E
Sbjct: 294  VDCCDGQGNSLQYQSSNVVVRARWLYEPDETDRITASHFRKIFLCSCGRLENSMGFDYIE 353

Query: 477  ISICGESFMLHQIRKMVGTAVAVKRGLLPRDILELSLNKFSRIVLPLAPSELLILRGNNF 298
            ISI GESFMLHQIRKMVGTAVAVKR L PRDIL LSL KFSRIVLPLAPSE+LILRGN F
Sbjct: 354  ISIWGESFMLHQIRKMVGTAVAVKRNLFPRDILTLSLAKFSRIVLPLAPSEVLILRGNTF 413

Query: 297  VLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISVVLPQVSKFLNPLKSPWMDWVELLDAN 118
            +LR  P N+TRP              VD+FY SV+LPQVSKFL+P KSPW +WVE LDAN
Sbjct: 414  ILRKMPSNITRPEMLTMVESEEILKEVDKFYRSVLLPQVSKFLDPSKSPWKEWVENLDAN 473

Query: 117  TGIPDSQMDEVRNAWEIWKENFQSGSNAMS 28
            T +PD+++DEVR AW++WKE   +G+ + S
Sbjct: 474  TSVPDAELDEVRTAWKLWKEKLLNGTASAS 503


>ref|XP_021810503.1| putative tRNA pseudouridine synthase [Prunus avium]
          Length = 516

 Score =  575 bits (1483), Expect = 0.0
 Identities = 307/526 (58%), Positives = 362/526 (68%), Gaps = 4/526 (0%)
 Frame = -3

Query: 1611 VSSLRMAISLMISSPKTSYLRFSNPRLPL----VLCFSSSSSPAGINNLKTLDCRDHPHK 1444
            +SSLR+  SL +        RFS P LPL    + C SS SS A   +   LD      K
Sbjct: 3    ISSLRLPFSLWLPRLPIQSFRFSKPILPLRLNLIYCSSSISSTAQQTSTD-LD------K 55

Query: 1443 WEPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNLHKI 1264
            W+  RKKKVV+RVGYVG+DYRGLQ Q DEH LSTIE ELE AI+ AGGIRDSN GNL+KI
Sbjct: 56   WQSVRKKKVVLRVGYVGSDYRGLQMQRDEHSLSTIEKELETAIFNAGGIRDSNLGNLNKI 115

Query: 1263 GWARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSIRVFSILPSK 1084
             WARSSRTDKGVHSLATMIS KMEIPE AW  D  GI+LANHIN YLP +I+VFSILP++
Sbjct: 116  AWARSSRTDKGVHSLATMISFKMEIPEKAWDGDPYGIALANHINYYLPHNIKVFSILPAQ 175

Query: 1083 RSFDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNYTIR 904
            RSFD R+ECN+R YSYLLPA++IGI+++  AAEID H+SDFN IL+ FEGEHPFHNYTIR
Sbjct: 176  RSFDPRKECNLRMYSYLLPADVIGIKSHFSAAEIDYHISDFNSILNCFEGEHPFHNYTIR 235

Query: 903  SKYRKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXELETIVANEV 724
            SKYR+++  K+S + G  S   R + E S ++                  + E +  N  
Sbjct: 236  SKYRRKLPVKKSRRHGSVSITGRSTGEASASESEESDRDENFDGTNAPETDAEVLNQNSS 295

Query: 723  LGTNVEGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRISASH 544
              +N EG             L      +   G ND++    I ARWLYEPDE+DRISASH
Sbjct: 296  PSSNSEG------------NLRNACEKQGDGGGNDQSAGSVIRARWLYEPDERDRISASH 343

Query: 543  FRKIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLPRDILELSLN 364
            FRKIF CSCGKL+  +G  YVE+SI GESFMLHQIRKMVGTAVA+KR LLPRDIL LSL 
Sbjct: 344  FRKIFRCSCGKLEKSLGHDYVELSISGESFMLHQIRKMVGTAVAIKRKLLPRDILTLSLA 403

Query: 363  KFSRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISVVLPQ 184
             FSRI+LPLAPSE+L LRGN F +R +PGNVTRP              VDEFY SV+LP+
Sbjct: 404  MFSRIILPLAPSEVLFLRGNRFSIRERPGNVTRPEMMAMVESEEIIKAVDEFYTSVMLPE 463

Query: 183  VSKFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQS 46
            VSKFL P   PW +WVE LD NTGIPD+++DEVRNAW++WKE F S
Sbjct: 464  VSKFLEPSGYPWKEWVENLDRNTGIPDAELDEVRNAWKVWKEKFDS 509


>ref|XP_007207376.1| putative tRNA pseudouridine synthase [Prunus persica]
 gb|ONH99706.1| hypothetical protein PRUPE_6G045100 [Prunus persica]
 gb|ONH99707.1| hypothetical protein PRUPE_6G045100 [Prunus persica]
          Length = 515

 Score =  575 bits (1482), Expect = 0.0
 Identities = 303/526 (57%), Positives = 362/526 (68%), Gaps = 4/526 (0%)
 Frame = -3

Query: 1611 VSSLRMAISLMISSPKTSYLRFSNPRLPL----VLCFSSSSSPAGINNLKTLDCRDHPHK 1444
            +SSLR+  SL +        RFS P LPL    + C SS SS A   +        H  K
Sbjct: 3    ISSLRLPFSLWLPRLPIQSFRFSKPILPLRLNLIYCSSSISSTAQQTST-------HLEK 55

Query: 1443 WEPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNLHKI 1264
            W+  RKKKVV+RVGYVG+DYRGLQ Q DEH LSTIE ELE AI+ AGGIRDSN GNL+KI
Sbjct: 56   WQSVRKKKVVLRVGYVGSDYRGLQMQRDEHSLSTIEKELETAIFNAGGIRDSNLGNLNKI 115

Query: 1263 GWARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSIRVFSILPSK 1084
             WARSSRTDKGVHSLATMIS KMEIPE AW  D  GI+L NHIN YLP +I+VFSILP++
Sbjct: 116  AWARSSRTDKGVHSLATMISFKMEIPEKAWDGDPYGIALVNHINYYLPHNIKVFSILPAQ 175

Query: 1083 RSFDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNYTIR 904
            RSFD R+ECN+R YSYLLPA++IGI+++  +AEID H+SDFN IL+ FEGEHPFHNYTIR
Sbjct: 176  RSFDPRKECNLRMYSYLLPADVIGIKSHFSSAEIDYHISDFNSILNCFEGEHPFHNYTIR 235

Query: 903  SKYRKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXELETIVANEV 724
            SKYR+++  K+S + G  S   R + E S ++                  + E +  N  
Sbjct: 236  SKYRRKLPVKKSRRHGSVSITGRSTGEASASESEESDVDENFDGTNTPESDAEVLNQNSS 295

Query: 723  LGTNVEGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRISASH 544
              +N EG              +    ++  +G ND++    I ARWLYEPDE+DRISASH
Sbjct: 296  PSSNSEGN-------------LRNACEKQGDGGNDQSAGSVIRARWLYEPDERDRISASH 342

Query: 543  FRKIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLPRDILELSLN 364
            FRKIF CSCGKL+  +G  YVE+SI GESFMLHQIRKMVGTAVA+KR LLPRDIL LSL 
Sbjct: 343  FRKIFLCSCGKLEKSLGHDYVELSISGESFMLHQIRKMVGTAVAIKRKLLPRDILTLSLA 402

Query: 363  KFSRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISVVLPQ 184
             FSRI+LPLAPSE+L LRGN F +R +PGNVTRP              VDEFY SV+LP+
Sbjct: 403  MFSRIILPLAPSEVLFLRGNRFSIRGRPGNVTRPEMMAMVESGEIIKAVDEFYTSVMLPE 462

Query: 183  VSKFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQS 46
            VSKFL P   PW +WVE LD NTGIPD+++DEVRNAW++WKE F S
Sbjct: 463  VSKFLEPSGYPWKEWVENLDRNTGIPDAELDEVRNAWKVWKEKFDS 508


>gb|PON66191.1| Pseudouridine synthase [Trema orientalis]
          Length = 531

 Score =  575 bits (1482), Expect = 0.0
 Identities = 303/537 (56%), Positives = 377/537 (70%), Gaps = 9/537 (1%)
 Frame = -3

Query: 1611 VSSLRMAISLMIS---SPKTSYLRFSNPRLP-----LVLCFSSSSSPAGIN-NLKTLDCR 1459
            +SSLR+ +S  ++   S ++S    SNP +P     +  C SSSS    ++ +  T D  
Sbjct: 3    ISSLRLPLSPWLTKSTSARSSITIRSNPIIPPRLRPIYRCSSSSSPYLSLSPSSTTQDTA 62

Query: 1458 DHPHKWEPFRKKKVVMRVGYVGTDYRGLQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFG 1279
             H  KW PFRKKKVVMRVGYVGT+YRGLQ Q DEH  STIE ELE AI+KAGGIRDSN+G
Sbjct: 63   THLEKWVPFRKKKVVMRVGYVGTEYRGLQMQRDEHSFSTIEKELETAIFKAGGIRDSNYG 122

Query: 1278 NLHKIGWARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDSIRVFS 1099
            +L KI WARSSRTDKGVHSLAT ISLK+EIP  AW  D  GI+LANHINSYLP  IRVFS
Sbjct: 123  DLQKIAWARSSRTDKGVHSLATTISLKLEIPVSAWNNDPYGIALANHINSYLPHDIRVFS 182

Query: 1098 ILPSKRSFDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFH 919
            ILPS+RSFD R+ECN+RKYSYLLPA+IIGI++N    E+D H+SDFN+IL++FEGEHPFH
Sbjct: 183  ILPSQRSFDPRKECNLRKYSYLLPADIIGIKSNFSTDEMDFHISDFNEILNTFEGEHPFH 242

Query: 918  NYTIRSKYRKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXXELETI 739
            NYTIR+KYRK+  AK+S + G  S+R + S+ +  A                     +  
Sbjct: 243  NYTIRAKYRKKFPAKKSDRNGHVSKRVKSSDTVLXAS-----------------DGEDNF 285

Query: 738  VANEVLGTNVEGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDR 559
              + +  +  EG +   S    +D  ++   ++  +GL  +     + ARWL+EPDE DR
Sbjct: 286  ECDGLTTSKAEGVSQNSSASSISDGNIVDSHEKLVSGLKIQGSSLVVRARWLHEPDETDR 345

Query: 558  ISASHFRKIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLLPRDIL 379
            I ASHFRKIF CSC KL+  +G +YVE+SI GESFMLHQIRKM+GTAVAVKR LLPRDIL
Sbjct: 346  IGASHFRKIFRCSCEKLEKSLGCNYVELSIWGESFMLHQIRKMIGTAVAVKRNLLPRDIL 405

Query: 378  ELSLNKFSRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYIS 199
             LSL+KFSRIVLPLAPSE+LILRGN+F LR +PGNVTRP              V+EFY S
Sbjct: 406  TLSLSKFSRIVLPLAPSEVLILRGNSFSLRTRPGNVTRPELVAMVKSEEILRGVNEFYTS 465

Query: 198  VVLPQVSKFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQSGSNAMS 28
            V++PQV+KFL+P  SPW +WVE LD NT IP++++DEVR AW++WKE F S ++  S
Sbjct: 466  VMIPQVTKFLDPSGSPWKEWVENLDRNTSIPETELDEVRTAWKVWKETFDSKTSVAS 522


>gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 507

 Score =  574 bits (1479), Expect = 0.0
 Identities = 300/506 (59%), Positives = 362/506 (71%), Gaps = 1/506 (0%)
 Frame = -3

Query: 1554 LRFSNPRLPL-VLCFSSSSSPAGINNLKTLDCRDHPHKWEPFRKKKVVMRVGYVGTDYRG 1378
            L+   PR+ L  LC SS++ P    +           KWEPFRKKKVVMRVGYVGT+YRG
Sbjct: 23   LKLPCPRIQLRFLCSSSTAQPLPPAS----------PKWEPFRKKKVVMRVGYVGTNYRG 72

Query: 1377 LQKQMDEHLLSTIEGELEAAIYKAGGIRDSNFGNLHKIGWARSSRTDKGVHSLATMISLK 1198
            LQ Q DEH LSTIE ELE AI+KAGGIRDSN+G+LHKI WARSSRTDKGVHSLATMI+LK
Sbjct: 73   LQVQRDEHQLSTIENELETAIFKAGGIRDSNYGDLHKIAWARSSRTDKGVHSLATMITLK 132

Query: 1197 MEIPEYAWKEDSSGISLANHINSYLPDSIRVFSILPSKRSFDARRECNIRKYSYLLPAEI 1018
            MEIPE AWKED +GI+LA  +NSYLPDSI+VFSILPS++SFD RRECN+RKYSYLLPAEI
Sbjct: 133  MEIPEDAWKEDPNGIALAKCVNSYLPDSIKVFSILPSQKSFDPRRECNLRKYSYLLPAEI 192

Query: 1017 IGIRNNLGAAEIDQHLSDFNDILSSFEGEHPFHNYTIRSKYRKQISAKESPKIGLGSRRA 838
            IGI+++   AEI+ H+SDFN IL+ FEGEHPFHNYT R+KYR+QI  +++ + G   + A
Sbjct: 193  IGIKSHFSEAEINHHISDFNSILNCFEGEHPFHNYTQRAKYRRQIPPRQTARNGRVPKGA 252

Query: 837  RLSNEISDAKIXXXXXXXXXXXXXXXXXELETIVANEVLGTNVEGKNSKFSRFIGTDKLM 658
               +E S +++                   E     E    N E K++ F      D+  
Sbjct: 253  EAHDESSTSELEESDVE-------------EDPRIEETTTLNSEEKSTSF------DEPR 293

Query: 657  LGMGDEHKNGLNDKNPLFAIHARWLYEPDEKDRISASHFRKIFHCSCGKLKHLIGMSYVE 478
            +   D   N L  ++    + ARWLYEPDE DRI+ASHFRKIF CSCG+L++ +G  Y+E
Sbjct: 294  VDCCDGQGNSLQYQSSNVVVRARWLYEPDETDRITASHFRKIFLCSCGRLENSMGFDYIE 353

Query: 477  ISICGESFMLHQIRKMVGTAVAVKRGLLPRDILELSLNKFSRIVLPLAPSELLILRGNNF 298
            ISI GESFMLHQIRKMVGTAVAVKR L PRDIL LSL KFSRIVLPLAPSE+LILRGN F
Sbjct: 354  ISIWGESFMLHQIRKMVGTAVAVKRNLFPRDILTLSLAKFSRIVLPLAPSEVLILRGNTF 413

Query: 297  VLRNQPGNVTRPXXXXXXXXXXXXXLVDEFYISVVLPQVSKFLNPLKSPWMDWVELLDAN 118
            +LR  P N+TRP              VD+FY SV+LPQVSKFL+P KSPW +WVE LDAN
Sbjct: 414  ILRKMPSNITRPEMLTMVESEEILKEVDKFYRSVLLPQVSKFLDPSKSPWKEWVENLDAN 473

Query: 117  TGIPDSQMDEVRNAWEIWKENFQSGS 40
            T +PD+++DEVR AW++WKE   +G+
Sbjct: 474  TSVPDAELDEVRTAWKLWKEKLLNGT 499


>ref|XP_021277897.1| putative tRNA pseudouridine synthase isoform X1 [Herrania umbratica]
          Length = 507

 Score =  573 bits (1478), Expect = 0.0
 Identities = 300/505 (59%), Positives = 361/505 (71%), Gaps = 1/505 (0%)
 Frame = -3

Query: 1539 PRLPL-VLCFSSSSSPAGINNLKTLDCRDHPHKWEPFRKKKVVMRVGYVGTDYRGLQKQM 1363
            PR+ L  LC SS++ P                KWEPFRKKKVVMRVGYVGT+YRGLQ Q 
Sbjct: 28   PRIQLRFLCSSSTAQPLP----------PAAPKWEPFRKKKVVMRVGYVGTNYRGLQVQR 77

Query: 1362 DEHLLSTIEGELEAAIYKAGGIRDSNFGNLHKIGWARSSRTDKGVHSLATMISLKMEIPE 1183
            DEH LSTIE ELE AI+KAGGIRDSN+G+LHKI WARSSRTDKGVHSLATMI+LKMEIPE
Sbjct: 78   DEHELSTIENELETAIFKAGGIRDSNYGDLHKIAWARSSRTDKGVHSLATMITLKMEIPE 137

Query: 1182 YAWKEDSSGISLANHINSYLPDSIRVFSILPSKRSFDARRECNIRKYSYLLPAEIIGIRN 1003
             AWK D +GI+LA  +NSYLPDSI+VFSILPS+RSFD RRECN+RKYSYLLPAEIIGI+ 
Sbjct: 138  DAWKADPNGIALAKCVNSYLPDSIKVFSILPSQRSFDPRRECNLRKYSYLLPAEIIGIKR 197

Query: 1002 NLGAAEIDQHLSDFNDILSSFEGEHPFHNYTIRSKYRKQISAKESPKIGLGSRRARLSNE 823
            +   AEI+ H+SDFN IL+ FEGEHPFHNYT R+KYR+QI  +++ + G   + A+  +E
Sbjct: 198  HFSEAEINHHISDFNSILNCFEGEHPFHNYTQRAKYRRQIPPRQTARNGRVPKGAKAHDE 257

Query: 822  ISDAKIXXXXXXXXXXXXXXXXXELETIVANEVLGTNVEGKNSKFSRFIGTDKLMLGMGD 643
             S +++                   E     E    N E K++      G D+ ++   D
Sbjct: 258  SSTSELEESDVE-------------EDPRIEETTTLNSEEKST------GFDEPLVDCCD 298

Query: 642  EHKNGLNDKNPLFAIHARWLYEPDEKDRISASHFRKIFHCSCGKLKHLIGMSYVEISICG 463
               N L +++    + ARWLYEPDE DRI+ASHFRKIF CSCG+L++ +G   +EISI G
Sbjct: 299  GQGNSLKNQSSNVVVRARWLYEPDETDRITASHFRKIFLCSCGRLENSMGFDNIEISIWG 358

Query: 462  ESFMLHQIRKMVGTAVAVKRGLLPRDILELSLNKFSRIVLPLAPSELLILRGNNFVLRNQ 283
            ESFMLHQIRKMVGTAVAVKR L PRDIL LSL KFSRIVLPLAPSE+LILRGN F+LR  
Sbjct: 359  ESFMLHQIRKMVGTAVAVKRNLFPRDILTLSLTKFSRIVLPLAPSEVLILRGNTFILRKM 418

Query: 282  PGNVTRPXXXXXXXXXXXXXLVDEFYISVVLPQVSKFLNPLKSPWMDWVELLDANTGIPD 103
            PGN+TRP              VD+FY SV+LPQVSKFL+P KSPW +WVE LDANT +PD
Sbjct: 419  PGNITRPEMLTMVESEEILKEVDKFYRSVLLPQVSKFLDPSKSPWKEWVENLDANTSVPD 478

Query: 102  SQMDEVRNAWEIWKENFQSGSNAMS 28
            +++DEVR AW++WKE    G+ + S
Sbjct: 479  AELDEVRTAWKLWKEKLLHGTASAS 503


>ref|XP_021684705.1| putative tRNA pseudouridine synthase isoform X1 [Hevea brasiliensis]
 ref|XP_021684706.1| putative tRNA pseudouridine synthase isoform X1 [Hevea brasiliensis]
 ref|XP_021684707.1| putative tRNA pseudouridine synthase isoform X1 [Hevea brasiliensis]
          Length = 526

 Score =  573 bits (1478), Expect = 0.0
 Identities = 314/542 (57%), Positives = 380/542 (70%), Gaps = 14/542 (2%)
 Frame = -3

Query: 1611 VSSLRMAIS-LMISSPK-TSYLRFSNP----RLPLVLCFSSSS--SPAGINNLKTLDCRD 1456
            +SSLR+ +S  ++  P+ TS+     P    +L L+ CF  SS  SP     L T    +
Sbjct: 3    ISSLRLPLSPWLVKKPRQTSFESLLMPIFPSKLSLLCCFCGSSLRSP-----LSTSHALN 57

Query: 1455 HPHKWEPFRKKKVVMRVGYVGTDYR------GLQKQMDEHLLSTIEGELEAAIYKAGGIR 1294
               KW+PFRKKKVV+RVGYVGTDYR      GLQKQ DEH LSTIE ELE AI+KAGGI 
Sbjct: 58   QSEKWQPFRKKKVVLRVGYVGTDYRAIFFMSGLQKQQDEHSLSTIEAELEHAIFKAGGIL 117

Query: 1293 DSNFGNLHKIGWARSSRTDKGVHSLATMISLKMEIPEYAWKEDSSGISLANHINSYLPDS 1114
            DSN+GNL KI WARSSRTDKGVHSLATMI++KMEIPE AWKED  GI+LA H+N+YLPD+
Sbjct: 118  DSNYGNLQKIAWARSSRTDKGVHSLATMITMKMEIPENAWKEDPYGIALAEHVNNYLPDT 177

Query: 1113 IRVFSILPSKRSFDARRECNIRKYSYLLPAEIIGIRNNLGAAEIDQHLSDFNDILSSFEG 934
            IR+FSILPS++SFD RREC++RKYSYLLPAEIIGI+++   AEID HLSDFNDIL++FEG
Sbjct: 178  IRIFSILPSQKSFDPRRECDLRKYSYLLPAEIIGIKSHFTTAEIDNHLSDFNDILNAFEG 237

Query: 933  EHPFHNYTIRSKYRKQISAKESPKIGLGSRRARLSNEISDAKIXXXXXXXXXXXXXXXXX 754
            EHPFHNYTIRSKYRKQ     +PKIG  S+R R S EIS ++I                 
Sbjct: 238  EHPFHNYTIRSKYRKQF---PTPKIGRVSKRPRSSGEISASEIEESDQEENYGIDRMIKL 294

Query: 753  ELETIVANEVLGTNVEGKNSKFSRFIGTDKLMLGMGDEHKNGLNDKNPLFAIHARWLYEP 574
            +      N +  T    +NS  S F           +++ + L D+     I ARWL+EP
Sbjct: 295  DHMEPTKNSMEST----QNSMESSFY----------NQNGSVLKDQKSNAVIRARWLHEP 340

Query: 573  DEKDRISASHFRKIFHCSCGKLKHLIGMSYVEISICGESFMLHQIRKMVGTAVAVKRGLL 394
            DE DRI ASHFRKIF CSCGKL+  +G  +VEISI GESFMLHQIRKMV TAVAVKR LL
Sbjct: 341  DETDRIGASHFRKIFRCSCGKLEKSVGFDFVEISIWGESFMLHQIRKMVATAVAVKRKLL 400

Query: 393  PRDILELSLNKFSRIVLPLAPSELLILRGNNFVLRNQPGNVTRPXXXXXXXXXXXXXLVD 214
            PRDIL LSL KFSRIVLPLAPSE+LILR N+F+ R +PG  +RP             +V+
Sbjct: 401  PRDILTLSLAKFSRIVLPLAPSEVLILRSNSFLFRTRPGVGSRPEMLTMVESEEILKVVN 460

Query: 213  EFYISVVLPQVSKFLNPLKSPWMDWVELLDANTGIPDSQMDEVRNAWEIWKENFQSGSNA 34
            +FYI+V+LPQVSKFL+P   PW +WVE LD +T IPD+++DEVR+AW++WKE  QS +N 
Sbjct: 461  DFYINVMLPQVSKFLDPCGFPWKEWVEKLDEHTSIPDAELDEVRSAWKVWKEKLQSRTNV 520

Query: 33   MS 28
             S
Sbjct: 521  AS 522