BLASTX nr result
ID: Acanthopanax21_contig00011961
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00011961
(559 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017242157.1| PREDICTED: uncharacterized protein LOC108214... 52 3e-12
ref|XP_010660631.1| PREDICTED: probable RNA-binding protein 46 i... 50 9e-11
ref|XP_010660632.1| PREDICTED: probable RNA-binding protein 46 i... 50 9e-11
ref|XP_010660633.1| PREDICTED: probable RNA-binding protein 46 i... 50 9e-11
ref|XP_010660634.1| PREDICTED: probable RNA-binding protein 46 i... 50 9e-11
emb|CBI21228.3| unnamed protein product, partial [Vitis vinifera] 50 9e-11
gb|OTF98846.1| putative nucleotide-binding alpha-beta plait doma... 50 3e-07
ref|XP_022005542.1| uncharacterized protein LOC110904039 isoform... 50 3e-07
emb|CDP02304.1| unnamed protein product [Coffea canephora] 49 2e-06
gb|KVI09067.1| Nucleotide-binding, alpha-beta plait [Cynara card... 46 3e-06
>ref|XP_017242157.1| PREDICTED: uncharacterized protein LOC108214587 [Daucus carota
subsp. sativus]
ref|XP_017242158.1| PREDICTED: uncharacterized protein LOC108214587 [Daucus carota
subsp. sativus]
Length = 611
Score = 51.6 bits (122), Expect(2) = 3e-12
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = +3
Query: 96 SVGGLPLTVTEGKIIEFMLSGADKNNKGAYLTGIISRHQVDKIGLL 233
S+ LP + +FM+SGAD++NKGAYLT +IS+HQV K+GL+
Sbjct: 368 SLKELPEPTAISVLDQFMISGADQDNKGAYLTALISKHQVTKLGLV 413
Score = 47.4 bits (111), Expect(2) = 3e-12
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +2
Query: 266 DISTKESELSKFSSRAHLSAFDSIALHMGLTAARSDGH 379
D+STKE ELS +S RA A+DS + H+ TA RSDGH
Sbjct: 427 DMSTKEPELSSYSRRAQYPAYDSTSSHLEYTATRSDGH 464
>ref|XP_010660631.1| PREDICTED: probable RNA-binding protein 46 isoform X1 [Vitis
vinifera]
Length = 586
Score = 49.7 bits (117), Expect(2) = 9e-11
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = +3
Query: 96 SVGGLPLTVTEGKIIEFMLSGADKNNKGAYLTGIISRHQVDKIGL 230
S+ LP + +FMLSGADK +KGAYL G++S+HQVD++G+
Sbjct: 379 SLHKLPELAAISVLDQFMLSGADKLDKGAYLAGLMSKHQVDRLGV 423
Score = 44.3 bits (103), Expect(2) = 9e-11
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +2
Query: 266 DISTKESELSKFSSRAHLSAFDSIALHMGLTAARSDGH------AXXXXXXXXXXXXXXX 427
D + ES L S R + AFDS+A +G TAAR DG+ +
Sbjct: 448 DTAPGESVLPSLSGRVYRPAFDSLASRLGTTAARYDGYETSPALSRYSTYSYTDYPLSRQ 507
Query: 428 XXFGRIHAAGPAPMHQTPGSSTPYGKVGLD 517
F ++ P P+++ SS+ YG+ LD
Sbjct: 508 LGFDKLEETSPTPLYRAAVSSSSYGRAELD 537
>ref|XP_010660632.1| PREDICTED: probable RNA-binding protein 46 isoform X2 [Vitis
vinifera]
Length = 585
Score = 49.7 bits (117), Expect(2) = 9e-11
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = +3
Query: 96 SVGGLPLTVTEGKIIEFMLSGADKNNKGAYLTGIISRHQVDKIGL 230
S+ LP + +FMLSGADK +KGAYL G++S+HQVD++G+
Sbjct: 378 SLHKLPELAAISVLDQFMLSGADKLDKGAYLAGLMSKHQVDRLGV 422
Score = 44.3 bits (103), Expect(2) = 9e-11
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +2
Query: 266 DISTKESELSKFSSRAHLSAFDSIALHMGLTAARSDGH------AXXXXXXXXXXXXXXX 427
D + ES L S R + AFDS+A +G TAAR DG+ +
Sbjct: 447 DTAPGESVLPSLSGRVYRPAFDSLASRLGTTAARYDGYETSPALSRYSTYSYTDYPLSRQ 506
Query: 428 XXFGRIHAAGPAPMHQTPGSSTPYGKVGLD 517
F ++ P P+++ SS+ YG+ LD
Sbjct: 507 LGFDKLEETSPTPLYRAAVSSSSYGRAELD 536
>ref|XP_010660633.1| PREDICTED: probable RNA-binding protein 46 isoform X3 [Vitis
vinifera]
Length = 579
Score = 49.7 bits (117), Expect(2) = 9e-11
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = +3
Query: 96 SVGGLPLTVTEGKIIEFMLSGADKNNKGAYLTGIISRHQVDKIGL 230
S+ LP + +FMLSGADK +KGAYL G++S+HQVD++G+
Sbjct: 372 SLHKLPELAAISVLDQFMLSGADKLDKGAYLAGLMSKHQVDRLGV 416
Score = 44.3 bits (103), Expect(2) = 9e-11
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +2
Query: 266 DISTKESELSKFSSRAHLSAFDSIALHMGLTAARSDGH------AXXXXXXXXXXXXXXX 427
D + ES L S R + AFDS+A +G TAAR DG+ +
Sbjct: 441 DTAPGESVLPSLSGRVYRPAFDSLASRLGTTAARYDGYETSPALSRYSTYSYTDYPLSRQ 500
Query: 428 XXFGRIHAAGPAPMHQTPGSSTPYGKVGLD 517
F ++ P P+++ SS+ YG+ LD
Sbjct: 501 LGFDKLEETSPTPLYRAAVSSSSYGRAELD 530
>ref|XP_010660634.1| PREDICTED: probable RNA-binding protein 46 isoform X4 [Vitis
vinifera]
Length = 578
Score = 49.7 bits (117), Expect(2) = 9e-11
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = +3
Query: 96 SVGGLPLTVTEGKIIEFMLSGADKNNKGAYLTGIISRHQVDKIGL 230
S+ LP + +FMLSGADK +KGAYL G++S+HQVD++G+
Sbjct: 371 SLHKLPELAAISVLDQFMLSGADKLDKGAYLAGLMSKHQVDRLGV 415
Score = 44.3 bits (103), Expect(2) = 9e-11
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +2
Query: 266 DISTKESELSKFSSRAHLSAFDSIALHMGLTAARSDGH------AXXXXXXXXXXXXXXX 427
D + ES L S R + AFDS+A +G TAAR DG+ +
Sbjct: 440 DTAPGESVLPSLSGRVYRPAFDSLASRLGTTAARYDGYETSPALSRYSTYSYTDYPLSRQ 499
Query: 428 XXFGRIHAAGPAPMHQTPGSSTPYGKVGLD 517
F ++ P P+++ SS+ YG+ LD
Sbjct: 500 LGFDKLEETSPTPLYRAAVSSSSYGRAELD 529
>emb|CBI21228.3| unnamed protein product, partial [Vitis vinifera]
Length = 533
Score = 49.7 bits (117), Expect(2) = 9e-11
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = +3
Query: 96 SVGGLPLTVTEGKIIEFMLSGADKNNKGAYLTGIISRHQVDKIGL 230
S+ LP + +FMLSGADK +KGAYL G++S+HQVD++G+
Sbjct: 326 SLHKLPELAAISVLDQFMLSGADKLDKGAYLAGLMSKHQVDRLGV 370
Score = 44.3 bits (103), Expect(2) = 9e-11
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +2
Query: 266 DISTKESELSKFSSRAHLSAFDSIALHMGLTAARSDGH------AXXXXXXXXXXXXXXX 427
D + ES L S R + AFDS+A +G TAAR DG+ +
Sbjct: 395 DTAPGESVLPSLSGRVYRPAFDSLASRLGTTAARYDGYETSPALSRYSTYSYTDYPLSRQ 454
Query: 428 XXFGRIHAAGPAPMHQTPGSSTPYGKVGLD 517
F ++ P P+++ SS+ YG+ LD
Sbjct: 455 LGFDKLEETSPTPLYRAAVSSSSYGRAELD 484
>gb|OTF98846.1| putative nucleotide-binding alpha-beta plait domain-containing
protein [Helianthus annuus]
Length = 649
Score = 49.7 bits (117), Expect(2) = 3e-07
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +3
Query: 21 LRVLPIPCTRKFSNSAEHAVKGSEVSVGGLPLTVTEGKIIEFMLSGADKNNKGAYLTGII 200
LRVL + ++ E S ++ LP + + +FMLSGA++++KGAYLT +I
Sbjct: 400 LRVLRLGIATRYDIEVE-----SLANLAELPESTAILVLDQFMLSGAEEHDKGAYLTSLI 454
Query: 201 SRHQVDKIGL 230
S++QVDK+GL
Sbjct: 455 SKYQVDKLGL 464
Score = 32.3 bits (72), Expect(2) = 3e-07
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +2
Query: 266 DISTKESELSKFSSRAHLSAFDSIALHMGLTAARSDGHAXXXXXXXXXXXXXXXXXFGRI 445
D + +E+ S RAHL A DS+ L + RSDG+A +
Sbjct: 476 DTNVRETVGLGLSGRAHLPALDSLGLPLDPIVPRSDGYASRYSSLISEYGAPSHASVLKR 535
Query: 446 HAAGPAPMHQTPGSST 493
P H+ P SS+
Sbjct: 536 DEISPLRFHELPASSS 551
>ref|XP_022005542.1| uncharacterized protein LOC110904039 isoform X1 [Helianthus annuus]
Length = 597
Score = 49.7 bits (117), Expect(2) = 3e-07
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +3
Query: 21 LRVLPIPCTRKFSNSAEHAVKGSEVSVGGLPLTVTEGKIIEFMLSGADKNNKGAYLTGII 200
LRVL + ++ E S ++ LP + + +FMLSGA++++KGAYLT +I
Sbjct: 348 LRVLRLGIATRYDIEVE-----SLANLAELPESTAILVLDQFMLSGAEEHDKGAYLTSLI 402
Query: 201 SRHQVDKIGL 230
S++QVDK+GL
Sbjct: 403 SKYQVDKLGL 412
Score = 32.3 bits (72), Expect(2) = 3e-07
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +2
Query: 266 DISTKESELSKFSSRAHLSAFDSIALHMGLTAARSDGHAXXXXXXXXXXXXXXXXXFGRI 445
D + +E+ S RAHL A DS+ L + RSDG+A +
Sbjct: 424 DTNVRETVGLGLSGRAHLPALDSLGLPLDPIVPRSDGYASRYSSLISEYGAPSHASVLKR 483
Query: 446 HAAGPAPMHQTPGSST 493
P H+ P SS+
Sbjct: 484 DEISPLRFHELPASSS 499
>emb|CDP02304.1| unnamed protein product [Coffea canephora]
Length = 562
Score = 48.5 bits (114), Expect(2) = 2e-06
Identities = 26/68 (38%), Positives = 39/68 (57%)
Frame = +3
Query: 21 LRVLPIPCTRKFSNSAEHAVKGSEVSVGGLPLTVTEGKIIEFMLSGADKNNKGAYLTGII 200
LR+L + +F ++ S+ LP + + +FMLSGADK N+G YL +I
Sbjct: 342 LRILRLGIATRFDIDIQNLT-----SLKKLPESAAISVLDQFMLSGADKENRGVYLAALI 396
Query: 201 SRHQVDKI 224
SRHQVD++
Sbjct: 397 SRHQVDQL 404
Score = 30.4 bits (67), Expect(2) = 2e-06
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 263 GDISTKESELSKFSSRAHLSAFDSIALHMGLT 358
GD+ + +S FSSR HL DS H+G T
Sbjct: 417 GDLIKSDVAISSFSSRVHLPVDDSFIPHVGST 448
>gb|KVI09067.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 607
Score = 46.2 bits (108), Expect(2) = 3e-06
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = +3
Query: 21 LRVLPIPCTRKFSNSAEHAVKGSEVSVGGLPLTVTEGKIIEFMLSGADKNNKGAYLTGII 200
LR+L + ++ E K +E LP + + +FMLSGA+K++K AYL +I
Sbjct: 350 LRILRLGIATRYDIEVESLSKLAE-----LPESTAISILDQFMLSGAEKHDKVAYLAALI 404
Query: 201 SRHQVDKIGL 230
SR+QV+K+G+
Sbjct: 405 SRYQVEKLGM 414
Score = 32.3 bits (72), Expect(2) = 3e-06
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +2
Query: 263 GDISTKESELSKFSSRAHLSAFDSIALHMGLTAARSDGHAXXXXXXXXXXXXXXXXXFG- 439
GD +T+ES S+R HL A DS+ +H+ + + S+ +A G
Sbjct: 426 GDTNTRESV--GLSARVHLPAIDSLGMHVDPSVSWSESYASRYSSLYSDHHRLPTSRAGV 483
Query: 440 -RIHAAGPAPMHQTPGSST 493
R P + + PGSST
Sbjct: 484 VRTEERSPLSLLEFPGSST 502