BLASTX nr result

ID: Acanthopanax21_contig00010726 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00010726
         (684 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006450274.1| uncharacterized protein LOC18054275 isoform ...    56   6e-07
ref|XP_024034455.1| uncharacterized protein LOC18054275 isoform ...    54   2e-06

>ref|XP_006450274.1| uncharacterized protein LOC18054275 isoform X1 [Citrus clementina]
 ref|XP_006483488.1| PREDICTED: uncharacterized protein LOC102631487 [Citrus sinensis]
 gb|ESR63514.1| hypothetical protein CICLE_v10009717mg [Citrus clementina]
 gb|KDO67436.1| hypothetical protein CISIN_1g030951mg [Citrus sinensis]
 dbj|GAY44355.1| hypothetical protein CUMW_081540 [Citrus unshiu]
          Length = 168

 Score = 55.8 bits (133), Expect(2) = 6e-07
 Identities = 35/85 (41%), Positives = 46/85 (54%)
 Frame = +1

Query: 1   KEFVSXXXXXXXXXXXRDILLAEIRFLRRRHKYLLKTQSSKSGLDSNFVHPPNSSLERKM 180
           KEFV            R+ILLAE+RFLRRRHK+ LK QS +  +    V   NSS + +M
Sbjct: 36  KEFVCKKKKLQIAKQKREILLAEVRFLRRRHKH-LKMQSEELEVKQGLV--ANSSTQSRM 92

Query: 181 LRNKRNQSPYGSELRNQYPVLISNP 255
           L N  N       + N  PVL+++P
Sbjct: 93  LANNENHGVNEVSVNNLPPVLVAHP 117



 Score = 26.2 bits (56), Expect(2) = 6e-07
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = +3

Query: 333 VQKQRNHLKVSES---KKKISWQDPSTLK 410
           V+K+R    ++E    KKKISWQD   LK
Sbjct: 139 VKKKRKTHTINEKRVGKKKISWQDQVALK 167


>ref|XP_024034455.1| uncharacterized protein LOC18054275 isoform X2 [Citrus clementina]
 ref|XP_024034456.1| uncharacterized protein LOC18054275 isoform X2 [Citrus clementina]
          Length = 160

 Score = 53.9 bits (128), Expect(2) = 2e-06
 Identities = 34/84 (40%), Positives = 45/84 (53%)
 Frame = +1

Query: 4   EFVSXXXXXXXXXXXRDILLAEIRFLRRRHKYLLKTQSSKSGLDSNFVHPPNSSLERKML 183
           EFV            R+ILLAE+RFLRRRHK+ LK QS +  +    V   NSS + +ML
Sbjct: 29  EFVCKKKKLQIAKQKREILLAEVRFLRRRHKH-LKMQSEELEVKQGLV--ANSSTQSRML 85

Query: 184 RNKRNQSPYGSELRNQYPVLISNP 255
            N  N       + N  PVL+++P
Sbjct: 86  ANNENHGVNEVSVNNLPPVLVAHP 109



 Score = 26.2 bits (56), Expect(2) = 2e-06
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = +3

Query: 333 VQKQRNHLKVSES---KKKISWQDPSTLK 410
           V+K+R    ++E    KKKISWQD   LK
Sbjct: 131 VKKKRKTHTINEKRVGKKKISWQDQVALK 159


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