BLASTX nr result
ID: Acanthopanax21_contig00010167
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00010167
(1056 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017240287.1| PREDICTED: DNA-directed RNA polymerases II a... 355 e-120
ref|XP_017222177.1| PREDICTED: DNA-directed RNA polymerases II a... 340 e-115
ref|XP_017222249.1| PREDICTED: DNA-directed RNA polymerases II a... 333 e-112
ref|XP_012076737.1| DNA-directed RNA polymerases II and IV subun... 326 e-109
emb|CDP10286.1| unnamed protein product [Coffea canephora] 325 e-108
ref|XP_012080620.1| DNA-directed RNA polymerases II and IV subun... 325 e-108
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II a... 325 e-108
ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II a... 325 e-108
gb|PON62276.1| DNA-directed RNA polymerase RPB5 subunit, eukaryo... 324 e-108
ref|XP_022959553.1| DNA-directed RNA polymerases II and IV subun... 324 e-108
ref|XP_021597880.1| DNA-directed RNA polymerases II and IV subun... 324 e-108
gb|POO00886.1| DNA-directed RNA polymerase RPB5 subunit, eukaryo... 323 e-108
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases II a... 323 e-108
ref|XP_010047920.1| PREDICTED: DNA-directed RNA polymerases II a... 324 e-108
ref|XP_021675285.1| DNA-directed RNA polymerases II and IV subun... 323 e-108
ref|XP_012841243.1| PREDICTED: DNA-directed RNA polymerases II a... 323 e-108
gb|PIN19014.1| RNA polymerase, 25-kDa subunit (common to polymer... 322 e-107
ref|XP_019180695.1| PREDICTED: DNA-directed RNA polymerases II a... 322 e-107
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [... 322 e-107
ref|XP_018829461.1| PREDICTED: DNA-directed RNA polymerases II a... 322 e-107
>ref|XP_017240287.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Daucus carota subsp. sativus]
ref|XP_017240288.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Daucus carota subsp. sativus]
ref|XP_017240289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Daucus carota subsp. sativus]
gb|KZN03304.1| hypothetical protein DCAR_012060 [Daucus carota subsp. sativus]
Length = 206
Score = 355 bits (912), Expect = e-120
Identities = 179/206 (86%), Positives = 191/206 (92%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
MAMTEE+I RLFRIRKTV+QMLDDRGYLV ++EKE+TKYQF+Q+YG+NMKREDLVISK+K
Sbjct: 1 MAMTEEEIARLFRIRKTVLQMLDDRGYLVGDAEKELTKYQFLQRYGDNMKREDLVISKTK 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
KN+PSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEIS+K
Sbjct: 61 KNDPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISSK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
F LEVFQEAELLVNIKEHVLVPEHQ ERYTVKETQLPRIQLSDP+ARYYG
Sbjct: 121 FNLEVFQEAELLVNIKEHVLVPEHQVLTKDEKKTLLERYTVKETQLPRIQLSDPVARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 LQRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_017222177.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Daucus carota subsp. sativus]
Length = 206
Score = 340 bits (873), Expect = e-115
Identities = 171/206 (83%), Positives = 187/206 (90%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M MTEE++ RL+RIR+TVMQML+DRGYLVVE+EKEM+K QF+QK+GEN KREDLVI KSK
Sbjct: 1 MTMTEEEVGRLYRIRRTVMQMLEDRGYLVVEAEKEMSKTQFLQKFGENFKREDLVICKSK 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
KNNPSDQIYVFYPEE KVGVKTMKTYTNRMKSENVFRAILVVQQ+LTPFAR+C AEIS+K
Sbjct: 61 KNNPSDQIYVFYPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQSLTPFARSCQAEISSK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
FQLEVFQE ELLVNIKEHVLVPEHQ +RYTV+ETQLPRIQL+DP+ARYYG
Sbjct: 121 FQLEVFQEHELLVNIKEHVLVPEHQVLTPEEKKELLDRYTVRETQLPRIQLTDPVARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
LTRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 LTRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_017222249.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Daucus carota subsp. sativus]
Length = 206
Score = 333 bits (853), Expect = e-112
Identities = 168/206 (81%), Positives = 184/206 (89%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M MTEE++ RL+RIR+TVMQML+DRGYLVVE+EKEM+K QF+QK+ EN KREDLVI KS+
Sbjct: 1 MTMTEEEVGRLYRIRRTVMQMLEDRGYLVVEAEKEMSKTQFLQKFRENFKREDLVICKSR 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
KNNPSDQIYVFYPEE KVGVKTMKTYTNRMKSENVFRAILVV Q+LTPFAR C AEIS+K
Sbjct: 61 KNNPSDQIYVFYPEEAKVGVKTMKTYTNRMKSENVFRAILVVLQSLTPFARPCQAEISSK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
FQLEVFQE ELLVNIKEHVLVPEHQ +RYTV+ETQLPRIQL+DP+ARYYG
Sbjct: 121 FQLEVFQEHELLVNIKEHVLVPEHQVLTPEEKKELLDRYTVRETQLPRIQLTDPVARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
LTRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 LTRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_012076737.1| DNA-directed RNA polymerases II and IV subunit 5A [Jatropha curcas]
gb|KDP33706.1| hypothetical protein JCGZ_07277 [Jatropha curcas]
Length = 206
Score = 326 bits (836), Expect = e-109
Identities = 161/206 (78%), Positives = 183/206 (88%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M ++E++I +LFRIRKTVMQML DRGYLV + E MT+ QF+ KYGENMKREDLVI+KS+
Sbjct: 1 MTLSEDEIKKLFRIRKTVMQMLKDRGYLVTDYEINMTREQFISKYGENMKREDLVINKSR 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+N PSDQIY+F+PEE KVGVKTMKTYTNRMK+ENV+RAILVVQQNLTPFARTCIAEI++K
Sbjct: 61 RNEPSDQIYIFFPEEQKVGVKTMKTYTNRMKNENVYRAILVVQQNLTPFARTCIAEIASK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
FQLEVFQEAELLVNIKEHVLVPEHQ ERYTVKETQLPR+Q++DPIARYYG
Sbjct: 121 FQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRVQVTDPIARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRY+TYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRFVV 206
>emb|CDP10286.1| unnamed protein product [Coffea canephora]
Length = 206
Score = 325 bits (833), Expect = e-108
Identities = 162/206 (78%), Positives = 181/206 (87%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M +++E++TRL RIRKTVM+ML DR Y V + E +M K +F+QKYGENMKREDLVI+KSK
Sbjct: 1 MTLSDEEVTRLHRIRKTVMEMLQDRAYFVTDKEIQMEKREFIQKYGENMKREDLVINKSK 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+N+ SDQIYVF+PEEPKVGVKTMKTYTNRMK+ENVFRAILVVQQNLTPFARTCI+EISTK
Sbjct: 61 RNDSSDQIYVFFPEEPKVGVKTMKTYTNRMKNENVFRAILVVQQNLTPFARTCISEISTK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
F LEVFQEAELLVNIK HVLVPEHQ ERYTVKETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKNHVLVPEHQLLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRYVTYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRFVV 206
>ref|XP_012080620.1| DNA-directed RNA polymerases II and IV subunit 5A [Jatropha curcas]
ref|XP_012080621.1| DNA-directed RNA polymerases II and IV subunit 5A [Jatropha curcas]
gb|KDP30787.1| hypothetical protein JCGZ_13730 [Jatropha curcas]
Length = 206
Score = 325 bits (833), Expect = e-108
Identities = 161/206 (78%), Positives = 183/206 (88%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M ++E++I RLFRIRKTVMQML DRGYLV + E MT+ QF+ KYGENMKREDLVI+KS+
Sbjct: 1 MTLSEDEIKRLFRIRKTVMQMLKDRGYLVTDYEINMTREQFISKYGENMKREDLVINKSR 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+N PSDQIYVF+PEE KVGVKTMKTYTNRMK+ENV+RA+LVVQQNLTPFARTCI+EI++K
Sbjct: 61 RNEPSDQIYVFFPEEQKVGVKTMKTYTNRMKNENVYRAVLVVQQNLTPFARTCISEIASK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
FQLEVFQEAELLVNIKEHVLVPEHQ ERYTVKETQLPRIQ++DPIARY+G
Sbjct: 121 FQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYFG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRY+TYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRFVV 206
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Vitis
vinifera]
ref|XP_002284110.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Vitis
vinifera]
Length = 206
Score = 325 bits (833), Expect = e-108
Identities = 166/206 (80%), Positives = 181/206 (87%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M+ +EE+I+RLFRIRKTVMQML DRGY V + E MTK+QFV K+GENMKREDLVI+K+K
Sbjct: 1 MSASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAK 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+ + SDQIYVF+PEE KVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI EISTK
Sbjct: 61 RTDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
F LEVFQEAELLVNIKEHVLVPEHQ ERYTVKETQLPRIQ+SDPIARY+G
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Populus euphratica]
Length = 206
Score = 325 bits (832), Expect = e-108
Identities = 166/206 (80%), Positives = 179/206 (86%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M +TEE+I RLFRIRKTVMQML DRGY V + E +MT+ QF KYG NMKREDLVI+K+K
Sbjct: 1 MTLTEEEIKRLFRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+N+ SDQIYVF+PEE KVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI EISTK
Sbjct: 61 RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
F LEVFQEAELLVNIKEHVLVPEHQ ERYTVKETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRYVTYRYV+
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVI 206
>gb|PON62276.1| DNA-directed RNA polymerase RPB5 subunit, eukaryote/virus
[Parasponia andersonii]
Length = 206
Score = 324 bits (831), Expect = e-108
Identities = 164/206 (79%), Positives = 181/206 (87%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M ++E++ITRLFRIRKTVMQML DR YLV + E MTK QF KYGENMKREDL+ISK++
Sbjct: 1 MVLSEDEITRLFRIRKTVMQMLKDRNYLVGDFEINMTKEQFRNKYGENMKREDLIISKAR 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+N+ SDQIYVF+PEE KVGVKTMK+YTNRMKSENVFRAILVVQQNLTPFARTCI+EISTK
Sbjct: 61 RNDSSDQIYVFFPEEQKVGVKTMKSYTNRMKSENVFRAILVVQQNLTPFARTCISEISTK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
F LEVFQEAELL+NIKEHVLVPEHQ ERYTVKETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEVFQEAELLINIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_022959553.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
moschata]
ref|XP_022959554.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
moschata]
ref|XP_022959555.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
moschata]
ref|XP_023004795.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
maxima]
ref|XP_023004796.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
maxima]
ref|XP_023004797.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
maxima]
ref|XP_023513561.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
pepo subsp. pepo]
ref|XP_023513563.1| DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita
pepo subsp. pepo]
Length = 206
Score = 324 bits (831), Expect = e-108
Identities = 161/206 (78%), Positives = 182/206 (88%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M + EE+ITRLFR+RKTV+QML DRGY V + E +M++ QF KYGE+MKRED+VI+K+K
Sbjct: 1 MVLAEEEITRLFRVRKTVLQMLKDRGYFVGDFEVDMSREQFKNKYGESMKREDIVINKAK 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+N+ SDQIY+F+PEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI+EISTK
Sbjct: 61 RNDSSDQIYIFFPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISTK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
F LEVFQEAELLVNIK+HVLVPEHQ ERYTVKETQLPRIQ++DP+ARYYG
Sbjct: 121 FHLEVFQEAELLVNIKDHVLVPEHQLLSNEEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_021597880.1| DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1
[Manihot esculenta]
ref|XP_021597881.1| DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1
[Manihot esculenta]
gb|OAY27272.1| hypothetical protein MANES_16G112700 [Manihot esculenta]
gb|OAY27273.1| hypothetical protein MANES_16G112700 [Manihot esculenta]
Length = 206
Score = 324 bits (830), Expect = e-108
Identities = 163/206 (79%), Positives = 181/206 (87%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M ++E++I RLFRIRKTVM ML DRGY V + E MT+ QF+ K+GENMKREDLVI+K+K
Sbjct: 1 MTLSEDEIKRLFRIRKTVMTMLKDRGYFVGDFEINMTREQFISKFGENMKREDLVINKTK 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+N+PSDQIYVF+PEE KVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI+EI+ K
Sbjct: 61 RNDPSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEIAAK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
FQLEVFQEAELLVNIKEHVLVPEHQ ERYTVKETQLPRIQ+SDPIARYYG
Sbjct: 121 FQLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRY+TYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRFVV 206
>gb|POO00886.1| DNA-directed RNA polymerase RPB5 subunit, eukaryote/virus [Trema
orientalis]
Length = 206
Score = 323 bits (829), Expect = e-108
Identities = 164/206 (79%), Positives = 181/206 (87%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M ++E++ITRLFRIRKTVMQML DR YLV + E MTK QF KYGENMKREDL+ISK++
Sbjct: 1 MVLSEDEITRLFRIRKTVMQMLKDRNYLVGDFEINMTKEQFRNKYGENMKREDLIISKAR 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+N+ SDQIYVF+PEE KVGVKTMK+YTNRMKSENVFRAILVVQQNLTPFARTCI+EISTK
Sbjct: 61 RNDSSDQIYVFFPEEQKVGVKTMKSYTNRMKSENVFRAILVVQQNLTPFARTCISEISTK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
F LEVFQEAELL+NIKEHVLVPEHQ ERYTVKETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEVFQEAELLLNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Solanum lycopersicum]
ref|XP_015074653.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum pennellii]
ref|XP_015074654.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum pennellii]
Length = 206
Score = 323 bits (829), Expect = e-108
Identities = 158/206 (76%), Positives = 183/206 (88%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
MA++EE++++LFR+RKT+M+ML DRGYLV + E M+K+QF+QKYGENMKREDLVI K+K
Sbjct: 1 MALSEEELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAK 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+NN SDQIYVF+PEEPKVGVKTMKTYT RMK E+VF+AIL+VQQNLTPFARTCI+EISTK
Sbjct: 61 RNNSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
F LEVFQEAE+LVNIK HVL+PEHQ ERYTVKETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEVFQEAEMLVNIKNHVLIPEHQLLSPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRYVV 206
>ref|XP_010047920.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Eucalyptus grandis]
ref|XP_018726012.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Eucalyptus grandis]
gb|KCW79948.1| hypothetical protein EUGRSUZ_C01278 [Eucalyptus grandis]
Length = 220
Score = 324 bits (830), Expect = e-108
Identities = 161/207 (77%), Positives = 180/207 (86%)
Frame = -3
Query: 946 DMAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKS 767
D A++EE+ITRL RI++TV+QML DRGYLV + E MT++QF++KYGENMKREDLVI+K
Sbjct: 14 DTALSEEEITRLHRIQRTVLQMLRDRGYLVTDGELNMTRFQFIEKYGENMKREDLVINKH 73
Query: 766 KKNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEIST 587
K+N SDQIYVF+PEE KVGVKTMKTYT RM SENVFRAIL VQQNLTPFARTCI+EIST
Sbjct: 74 KRNESSDQIYVFFPEEAKVGVKTMKTYTTRMNSENVFRAILAVQQNLTPFARTCISEIST 133
Query: 586 KFQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYY 407
KF LEVFQEAELLVNIKEHVLVPEHQ +RYTVKETQLPRIQ++DP+ARYY
Sbjct: 134 KFHLEVFQEAELLVNIKEHVLVPEHQVLANEEKKTLLQRYTVKETQLPRIQVTDPVARYY 193
Query: 406 GLTRGQVVKIIRPSETAGRYVTYRYVV 326
GL RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 194 GLKRGQVVKIIRPSETAGRYVTYRYVV 220
>ref|XP_021675285.1| DNA-directed RNA polymerases II and IV subunit 5A [Hevea
brasiliensis]
Length = 206
Score = 323 bits (827), Expect = e-108
Identities = 163/206 (79%), Positives = 181/206 (87%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M ++E++I RLFRIRKTVMQML DRGY V + E MT+ QF+ K+GENMKREDLVI+KSK
Sbjct: 1 MTLSEDEIKRLFRIRKTVMQMLKDRGYFVGDFEINMTREQFISKFGENMKREDLVINKSK 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+N+ SDQIYVF+PEE KVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI+EI+ K
Sbjct: 61 RNDASDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEIAAK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
FQLEVFQEAELLVNIKEHVLVPEHQ ERYTVKETQLPRIQ+SDPIARY+G
Sbjct: 121 FQLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRY+TYR+VV
Sbjct: 181 LKRGQVVKIIRPSETAGRYITYRFVV 206
>ref|XP_012841243.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Erythranthe guttata]
ref|XP_012841244.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Erythranthe guttata]
gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Erythranthe guttata]
Length = 206
Score = 323 bits (827), Expect = e-108
Identities = 159/206 (77%), Positives = 179/206 (86%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M +++E+ITRL R+RK VMQML DRGY+V + E +MTKYQF+QKYGENMKREDLVI+K
Sbjct: 1 MVLSDEEITRLVRVRKNVMQMLKDRGYMVGDFEIDMTKYQFLQKYGENMKREDLVINKGL 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+NN SDQIY+F+PEEPKVGVKTMKTYTNRMK E V RA+L+VQQNLTPFARTCI+EISTK
Sbjct: 61 RNNSSDQIYIFFPEEPKVGVKTMKTYTNRMKEEGVHRAVLIVQQNLTPFARTCISEISTK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
F LEVFQEAE+L+NIKEHVLVPEHQ ERYTVKETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEVFQEAEMLINIKEHVLVPEHQVLTPEEKKTLLERYTVKETQLPRIQITDPIARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RG VVKIIRPSETAGRYVTYRYVV
Sbjct: 181 LKRGHVVKIIRPSETAGRYVTYRYVV 206
>gb|PIN19014.1| RNA polymerase, 25-kDa subunit (common to polymerases I, II and
III) [Handroanthus impetiginosus]
Length = 206
Score = 322 bits (826), Expect = e-107
Identities = 163/206 (79%), Positives = 181/206 (87%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M +++E+ITRL+RIR+TVMQML DRGY+V + E EMTKYQF+QK+GENMKREDLVI+K
Sbjct: 1 MVLSDEEITRLWRIRRTVMQMLRDRGYIVGDFEIEMTKYQFIQKHGENMKREDLVINKGL 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
++N SDQIYVF+PEE KVGVKTMKTYTNRMK E V RAILVVQQNLTPFARTCI+EISTK
Sbjct: 61 RSNSSDQIYVFFPEEQKVGVKTMKTYTNRMKDEGVHRAILVVQQNLTPFARTCISEISTK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
F LEVFQEAELLVNIKEHVLVPEHQ ERYTVKETQLPRIQ++DPI+RYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTVKETQLPRIQITDPISRYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_019180695.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Ipomoea nil]
ref|XP_019180696.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Ipomoea nil]
Length = 206
Score = 322 bits (826), Expect = e-107
Identities = 163/206 (79%), Positives = 180/206 (87%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M ++EE+ITRLFRIRKTVMQML DRGY+V + E M K+QF+ KYGENMKRED+VI K+
Sbjct: 1 MPLSEEEITRLFRIRKTVMQMLTDRGYMVTDYEIGMPKHQFISKYGENMKREDIVIQKAL 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+++ SDQIYVF+PEE KVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI+EISTK
Sbjct: 61 RSDNSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCISEISTK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
F LEVFQEAELLVNIKEH LVPEHQ ERYTVKETQLPRIQ++DP+ARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQLLTPEEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206
>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gb|PNT32002.1| hypothetical protein POPTR_006G161600v3 [Populus trichocarpa]
Length = 206
Score = 322 bits (826), Expect = e-107
Identities = 165/206 (80%), Positives = 178/206 (86%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M +TEE+I RL RIRKTVMQML DRGY V + E +MT+ QF KYG NMKREDLVI+K+K
Sbjct: 1 MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+N+ SDQIYVF+PEE KVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCI EISTK
Sbjct: 61 RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
F LEVFQEAELLVNIKEHVLVPEHQ ERYTVKETQLPRIQ++DPIARYYG
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRYVTYRYV+
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVI 206
>ref|XP_018829461.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018829463.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
ref|XP_018829464.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Juglans regia]
Length = 206
Score = 322 bits (824), Expect = e-107
Identities = 163/206 (79%), Positives = 180/206 (87%)
Frame = -3
Query: 943 MAMTEEDITRLFRIRKTVMQMLDDRGYLVVESEKEMTKYQFVQKYGENMKREDLVISKSK 764
M ++EE+ITRLFRIR+TVMQML DRGY V + E +MTK QF KYGE+MKREDLVI+KSK
Sbjct: 1 MTLSEEEITRLFRIRRTVMQMLKDRGYFVGDFEIDMTKEQFKNKYGESMKREDLVINKSK 60
Query: 763 KNNPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISTK 584
+NN SDQIY+F+PEEPKVGVKTMKTY+ RMKSENVFRAILVVQQNLTPFAR+ I EISTK
Sbjct: 61 RNNSSDQIYIFFPEEPKVGVKTMKTYSQRMKSENVFRAILVVQQNLTPFARSSINEISTK 120
Query: 583 FQLEVFQEAELLVNIKEHVLVPEHQXXXXXXXXXXXERYTVKETQLPRIQLSDPIARYYG 404
F LEVFQEAELL+NIKEHVLVPEHQ ERYTVKETQLPRIQ++DP+ARYYG
Sbjct: 121 FHLEVFQEAELLINIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYG 180
Query: 403 LTRGQVVKIIRPSETAGRYVTYRYVV 326
L RGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 LKRGQVVKIIRPSETAGRYVTYRYVV 206