BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00008828
         (1209 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC01499.1| Uncharacterized RNA-binding protein [Morus notabi...    60   4e-06

>gb|EXC01499.1| Uncharacterized RNA-binding protein [Morus notabilis]
          Length = 492

 Score = 60.1 bits (144), Expect = 4e-06
 Identities = 61/201 (30%), Positives = 81/201 (40%), Gaps = 22/201 (10%)
 Frame = +1

Query: 256 VGAGADHTLLTTEGVVDHTL--------PSTVANADHTLHTTVD*GHTHDLAPRTADHQS 411
           +  G DHTLL+T  + +HTL        P  +  ADHTL   VD   T    P TADH  
Sbjct: 253 IEVGVDHTLLST-AIGNHTLHITDEGHIPLIIRGADHTLLMKVDADPTLGHGPLTADHHC 311

Query: 412 AGVVGTTPLTIIGTPHLITAIIEAGTA------LSPQVFHQEHTGIHGGATHAASLQGAP 573
           A V GTT L   GT H +  I+E   A      ++P +      G     T     +   
Sbjct: 312 AVVTGTTLLITPGTTHQMIGIMEEDIAPGTIPQMAPAMREDIAPGTIPQMTPTMREEDTA 371

Query: 574 PGEDIHLVFPLYGGGAILRACLLLDQGETR-GVSPAALHTSVDIPG----KAFLLGAEVL 738
           PG    +     G  A + A     QG  + G + A  H  +++ G     AFLL  E  
Sbjct: 372 PGSIPQMRLTTRGSIATVPAVSRQGQGGAQEGATHAVSHLDLEVQGGFIYGAFLLMGEAQ 431

Query: 739 VHLPDL---FQGPRAKVLVHL 792
              P +   F G +    VHL
Sbjct: 432 AVAPQVLLQFVGAQGLAKVHL 452