BLASTX nr result

ID: Acanthopanax21_contig00007434 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00007434
         (678 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AIC33043.1| DNA-directed RNA polymerase IIa [Panax ginseng]        242   6e-79
ref|XP_017249671.1| PREDICTED: DNA-directed RNA polymerases II, ...   226   1e-72
ref|XP_017241414.1| PREDICTED: DNA-directed RNA polymerases II, ...   222   7e-71
gb|KVH98719.1| DNA-directed RNA polymerase, 14-18kDa subunit, co...   216   2e-68
ref|XP_023755688.1| DNA-directed RNA polymerases II and V subuni...   215   3e-68
gb|OWM78139.1| hypothetical protein CDL15_Pgr014958 [Punica gran...   213   3e-67
ref|XP_022016108.1| DNA-directed RNA polymerases II, IV and V su...   212   4e-67
ref|XP_023922455.1| DNA-directed RNA polymerases II, IV and V su...   211   2e-66
ref|XP_023769998.1| DNA-directed RNA polymerases II, IV and V su...   211   2e-66
ref|XP_010246465.1| PREDICTED: DNA-directed RNA polymerases II a...   209   7e-66
gb|EYU34946.1| hypothetical protein MIMGU_mgv1a015848mg [Erythra...   208   1e-65
ref|XP_012840303.1| PREDICTED: DNA-directed RNA polymerases II, ...   208   2e-65
ref|XP_021817129.1| DNA-directed RNA polymerases II, IV and V su...   204   6e-64
ref|XP_011076215.1| DNA-directed RNA polymerases II, IV and V su...   204   6e-64
ref|XP_009620211.1| PREDICTED: DNA-directed RNA polymerases II a...   204   9e-64
ref|XP_011101178.1| DNA-directed RNA polymerases II, IV and V su...   204   9e-64
ref|XP_022034672.1| DNA-directed RNA polymerases II and V subuni...   204   1e-63
ref|XP_022944842.1| DNA-directed RNA polymerases II, IV and V su...   203   1e-63
ref|XP_009366512.1| PREDICTED: DNA-directed RNA polymerases II, ...   203   1e-63
ref|XP_008386880.1| PREDICTED: DNA-directed RNA polymerases II, ...   203   1e-63

>gb|AIC33043.1| DNA-directed RNA polymerase IIa [Panax ginseng]
          Length = 145

 Score =  242 bits (618), Expect = 6e-79
 Identities = 122/123 (99%), Positives = 122/123 (99%), Gaps = 1/123 (0%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPL-ADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQI 502
           EGAEEELDADATKEDDVPDPL ADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQI
Sbjct: 23  EGAEEELDADATKEDDVPDPLQADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQI 82

Query: 501 SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 322
           SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV
Sbjct: 83  SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 142

Query: 321 GGD 313
           GGD
Sbjct: 143 GGD 145


>ref|XP_017249671.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 6A
           [Daucus carota subsp. sativus]
 gb|KZM94932.1| hypothetical protein DCAR_018174 [Daucus carota subsp. sativus]
          Length = 145

 Score =  226 bits (577), Expect = 1e-72
 Identities = 113/123 (91%), Positives = 117/123 (95%), Gaps = 1/123 (0%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPL-ADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQI 502
           EGAEE++DADA KEDDV DPL ADGE+KQE+E  ER RKTSKYMTKYERARILGTRALQI
Sbjct: 23  EGAEEDVDADANKEDDVADPLLADGEEKQEEEPAERPRKTSKYMTKYERARILGTRALQI 82

Query: 501 SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 322
           SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV
Sbjct: 83  SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 142

Query: 321 GGD 313
           GGD
Sbjct: 143 GGD 145


>ref|XP_017241414.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Daucus carota subsp. sativus]
          Length = 146

 Score =  222 bits (565), Expect = 7e-71
 Identities = 113/124 (91%), Positives = 117/124 (94%), Gaps = 2/124 (1%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPL-ADGEDKQ-EQEQVERARKTSKYMTKYERARILGTRALQ 505
           EGAEEE+DADA K+DD+ DPL ADGEDKQ  +E VER RKTSKYMTKYERARILGTRALQ
Sbjct: 23  EGAEEEVDADANKDDDIGDPLLADGEDKQGAEEPVERPRKTSKYMTKYERARILGTRALQ 82

Query: 504 ISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQ 325
           ISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQ
Sbjct: 83  ISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQ 142

Query: 324 VGGD 313
           VGGD
Sbjct: 143 VGGD 146


>gb|KVH98719.1| DNA-directed RNA polymerase, 14-18kDa subunit, conserved
           site-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 145

 Score =  216 bits (549), Expect = 2e-68
 Identities = 109/123 (88%), Positives = 114/123 (92%), Gaps = 1/123 (0%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPLA-DGEDKQEQEQVERARKTSKYMTKYERARILGTRALQI 502
           EGAEE++DAD  KE+DVPDPL  D EDK+E E VE+ RKT KYMTKYERARILGTRALQI
Sbjct: 24  EGAEEDIDAD-NKEEDVPDPLVGDNEDKEEPEAVEKPRKTIKYMTKYERARILGTRALQI 82

Query: 501 SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 322
           SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV
Sbjct: 83  SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 142

Query: 321 GGD 313
           GGD
Sbjct: 143 GGD 145


>ref|XP_023755688.1| DNA-directed RNA polymerases II and V subunit 6B-like [Lactuca
           sativa]
 gb|PLY91535.1| hypothetical protein LSAT_1X9221 [Lactuca sativa]
          Length = 145

 Score =  215 bits (548), Expect = 3e-68
 Identities = 109/123 (88%), Positives = 113/123 (91%), Gaps = 1/123 (0%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPL-ADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQI 502
           EGAEEE+D D   E+DVPDPL  D EDK+EQE VE+ RKT KYMTKYERARILGTRALQI
Sbjct: 24  EGAEEEIDGDKV-EEDVPDPLLGDNEDKEEQEAVEKPRKTIKYMTKYERARILGTRALQI 82

Query: 501 SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 322
           SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV
Sbjct: 83  SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 142

Query: 321 GGD 313
           GGD
Sbjct: 143 GGD 145


>gb|OWM78139.1| hypothetical protein CDL15_Pgr014958 [Punica granatum]
 gb|PKI45573.1| hypothetical protein CRG98_034091 [Punica granatum]
          Length = 144

 Score =  213 bits (541), Expect = 3e-67
 Identities = 105/122 (86%), Positives = 113/122 (92%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPLADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQIS 499
           EGAE+E+DA+    DDVPDPL D E+K+EQ  V+R RKTSKYMTKYERARILGTRALQIS
Sbjct: 24  EGAEDEVDAN-NNNDDVPDPLLDAEEKEEQGPVKRERKTSKYMTKYERARILGTRALQIS 82

Query: 498 MNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG 319
           MNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPDGS+EDWGVDELIVEDSWKRQVG
Sbjct: 83  MNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSFEDWGVDELIVEDSWKRQVG 142

Query: 318 GD 313
           GD
Sbjct: 143 GD 144


>ref|XP_022016108.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like
           [Helianthus annuus]
 gb|OTF93433.1| putative RNA polymerase Rpb6 [Helianthus annuus]
          Length = 144

 Score =  212 bits (540), Expect = 4e-67
 Identities = 106/123 (86%), Positives = 114/123 (92%), Gaps = 1/123 (0%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPL-ADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQI 502
           EGAEE++D +  K+D+ PDPL  D EDK+EQEQ ER RKTSKYMTKYERARILGTRALQI
Sbjct: 23  EGAEEDVDGE-NKDDEAPDPLLGDDEDKEEQEQGERPRKTSKYMTKYERARILGTRALQI 81

Query: 501 SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 322
           SMNAPVMVELEGETDPLEIAMKELR++KIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV
Sbjct: 82  SMNAPVMVELEGETDPLEIAMKELREKKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 141

Query: 321 GGD 313
           GGD
Sbjct: 142 GGD 144


>ref|XP_023922455.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like [Quercus
           suber]
 gb|POF24949.1| dna-directed rna polymerases ii, iv and v subunit 6a [Quercus
           suber]
          Length = 143

 Score =  211 bits (536), Expect = 2e-66
 Identities = 105/122 (86%), Positives = 112/122 (91%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPLADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQIS 499
           EGAEE+L+ +A   +DVP  L +GEDK+E E VER RKTSKYMTKYERARILGTRALQIS
Sbjct: 24  EGAEEDLENNAN--EDVPGDLVEGEDKEEPEPVERPRKTSKYMTKYERARILGTRALQIS 81

Query: 498 MNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG 319
           MNAPVMVELEGETDPLEIAMKELRQRK+PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG
Sbjct: 82  MNAPVMVELEGETDPLEIAMKELRQRKVPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG 141

Query: 318 GD 313
           GD
Sbjct: 142 GD 143


>ref|XP_023769998.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like [Lactuca
           sativa]
 gb|PLY80739.1| hypothetical protein LSAT_3X64081 [Lactuca sativa]
          Length = 145

 Score =  211 bits (536), Expect = 2e-66
 Identities = 104/123 (84%), Positives = 114/123 (92%), Gaps = 1/123 (0%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPL-ADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQI 502
           EGAEEE      K+D++PDPL AD EDK++QEQV+R RKTSKYMTKYERARILGTRALQI
Sbjct: 23  EGAEEEDGEGENKDDELPDPLLADNEDKEDQEQVDRPRKTSKYMTKYERARILGTRALQI 82

Query: 501 SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 322
           SMNAPVMVELEGETDPLEIAMKELR++KIPFTIRR+LPDGSYE+WGVDELIVEDSWKRQV
Sbjct: 83  SMNAPVMVELEGETDPLEIAMKELREKKIPFTIRRHLPDGSYEEWGVDELIVEDSWKRQV 142

Query: 321 GGD 313
           GGD
Sbjct: 143 GGD 145


>ref|XP_010246465.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           isoform X1 [Nelumbo nucifera]
 ref|XP_010246466.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           isoform X1 [Nelumbo nucifera]
          Length = 144

 Score =  209 bits (532), Expect = 7e-66
 Identities = 106/123 (86%), Positives = 112/123 (91%), Gaps = 1/123 (0%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPL-ADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQI 502
           EGAEE  D D    +DVPDPL A+ E+K+EQE VER RKTSKYMTKYERARILGTRALQI
Sbjct: 24  EGAEE--DVDNNNNEDVPDPLMAETEEKEEQESVERRRKTSKYMTKYERARILGTRALQI 81

Query: 501 SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 322
           SMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVED+WKRQV
Sbjct: 82  SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDTWKRQV 141

Query: 321 GGD 313
           GGD
Sbjct: 142 GGD 144


>gb|EYU34946.1| hypothetical protein MIMGU_mgv1a015848mg [Erythranthe guttata]
          Length = 127

 Score =  208 bits (529), Expect = 1e-65
 Identities = 103/118 (87%), Positives = 109/118 (92%), Gaps = 1/118 (0%)
 Frame = -1

Query: 663 ELDADATKEDDVPDPL-ADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQISMNAP 487
           E++ D    DDVPDP+  DGE+KQEQE VER RKTSKYMTKYERARILGTRALQISMNAP
Sbjct: 10  EVEEDNENPDDVPDPIEGDGEEKQEQEPVERPRKTSKYMTKYERARILGTRALQISMNAP 69

Query: 486 VMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 313
           VMVELEGETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 70  VMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 127


>ref|XP_012840303.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Erythranthe guttata]
 gb|EYU34945.1| hypothetical protein MIMGU_mgv1a015848mg [Erythranthe guttata]
          Length = 143

 Score =  208 bits (529), Expect = 2e-65
 Identities = 103/118 (87%), Positives = 109/118 (92%), Gaps = 1/118 (0%)
 Frame = -1

Query: 663 ELDADATKEDDVPDPL-ADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQISMNAP 487
           E++ D    DDVPDP+  DGE+KQEQE VER RKTSKYMTKYERARILGTRALQISMNAP
Sbjct: 26  EVEEDNENPDDVPDPIEGDGEEKQEQEPVERPRKTSKYMTKYERARILGTRALQISMNAP 85

Query: 486 VMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 313
           VMVELEGETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 86  VMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 143


>ref|XP_021817129.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like [Prunus
           avium]
          Length = 143

 Score =  204 bits (519), Expect = 6e-64
 Identities = 102/122 (83%), Positives = 108/122 (88%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPLADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQIS 499
           EGAEE  D +    DD+P    + EDK+EQ QVER RKTSK+MTKYERARILGTRALQIS
Sbjct: 24  EGAEE--DVENINNDDLPGDTIEAEDKEEQAQVERPRKTSKFMTKYERARILGTRALQIS 81

Query: 498 MNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG 319
           MNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG
Sbjct: 82  MNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG 141

Query: 318 GD 313
           GD
Sbjct: 142 GD 143


>ref|XP_011076215.1| DNA-directed RNA polymerases II, IV and V subunit 6A [Sesamum
           indicum]
          Length = 143

 Score =  204 bits (519), Expect = 6e-64
 Identities = 104/123 (84%), Positives = 110/123 (89%), Gaps = 1/123 (0%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPL-ADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQI 502
           EGAE E   +    +D PDP+  DG++KQEQE VER RKTSKYMTKYERARILGTRALQI
Sbjct: 23  EGAEVE--DENNNNEDGPDPIEGDGDEKQEQEPVERPRKTSKYMTKYERARILGTRALQI 80

Query: 501 SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 322
           SMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV
Sbjct: 81  SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 140

Query: 321 GGD 313
           GGD
Sbjct: 141 GGD 143


>ref|XP_009620211.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           [Nicotiana tomentosiformis]
 ref|XP_009763347.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           [Nicotiana sylvestris]
 ref|XP_016471800.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           [Nicotiana tabacum]
 ref|XP_016490328.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           [Nicotiana tabacum]
 ref|XP_019231836.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           isoform X1 [Nicotiana attenuata]
 gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
 gb|AAD34614.1|AF153278_1 DNA-directed RNA polymerase IIb [Nicotiana tabacum]
 gb|OIT28448.1| dna-directed rna polymerases ii, iv and v subunit 6a [Nicotiana
           attenuata]
          Length = 143

 Score =  204 bits (518), Expect = 9e-64
 Identities = 103/122 (84%), Positives = 110/122 (90%), Gaps = 1/122 (0%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPL-ADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQI 502
           EGAE  ++ D    +D+PDPL  +GE+K EQE VER RKTSKYMTKYERARILGTRALQI
Sbjct: 23  EGAE--IEEDNGNNEDIPDPLLGEGEEKTEQEPVERPRKTSKYMTKYERARILGTRALQI 80

Query: 501 SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 322
           SMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV
Sbjct: 81  SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 140

Query: 321 GG 316
           GG
Sbjct: 141 GG 142


>ref|XP_011101178.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like [Sesamum
           indicum]
          Length = 143

 Score =  204 bits (518), Expect = 9e-64
 Identities = 103/123 (83%), Positives = 110/123 (89%), Gaps = 1/123 (0%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPL-ADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQI 502
           EGAE E   +    +D PDP+  DG++KQEQE +ER RKTSKYMTKYERARILGTRALQI
Sbjct: 23  EGAEVE--EENNNNEDGPDPVEGDGDEKQEQEPIERPRKTSKYMTKYERARILGTRALQI 80

Query: 501 SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 322
           SMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV
Sbjct: 81  SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 140

Query: 321 GGD 313
           GGD
Sbjct: 141 GGD 143


>ref|XP_022034672.1| DNA-directed RNA polymerases II and V subunit 6B-like [Helianthus
           annuus]
 gb|OTG28204.1| putative RNA polymerase Rpb6 [Helianthus annuus]
          Length = 145

 Score =  204 bits (518), Expect = 1e-63
 Identities = 101/123 (82%), Positives = 112/123 (91%), Gaps = 1/123 (0%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPL-ADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQI 502
           EG EE++D +  K++D+PDPL  + E+K+E E VE+ RKT KYMTKYERARILGTRALQI
Sbjct: 24  EGVEEDVDGE-NKDEDIPDPLLGENEEKEEGEGVEKPRKTIKYMTKYERARILGTRALQI 82

Query: 501 SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 322
           SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV
Sbjct: 83  SMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQV 142

Query: 321 GGD 313
           GG+
Sbjct: 143 GGE 145


>ref|XP_022944842.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like
           [Cucurbita moschata]
 ref|XP_022968530.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like
           [Cucurbita maxima]
 ref|XP_023541080.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like
           [Cucurbita pepo subsp. pepo]
          Length = 143

 Score =  203 bits (517), Expect = 1e-63
 Identities = 101/121 (83%), Positives = 109/121 (90%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPLADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQIS 499
           EGAEEELD +    DDVP    + EDK+++E +ER RKTSK+MTKYERARILGTRALQIS
Sbjct: 24  EGAEEELDNN--NADDVPGEPVEAEDKEDEEPIERVRKTSKFMTKYERARILGTRALQIS 81

Query: 498 MNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG 319
           MNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG
Sbjct: 82  MNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG 141

Query: 318 G 316
           G
Sbjct: 142 G 142


>ref|XP_009366512.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Pyrus x bretschneideri]
          Length = 144

 Score =  203 bits (517), Expect = 1e-63
 Identities = 103/122 (84%), Positives = 107/122 (87%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPLADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQIS 499
           EGAEEE D D    DDV     + E+K+EQE VER RKTSKYMTKYER RILGTRALQIS
Sbjct: 24  EGAEEE-DVDNLNNDDVAGDPIEAEEKEEQEGVERPRKTSKYMTKYERGRILGTRALQIS 82

Query: 498 MNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG 319
           MNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG
Sbjct: 83  MNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG 142

Query: 318 GD 313
           GD
Sbjct: 143 GD 144


>ref|XP_008386880.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Malus domestica]
          Length = 145

 Score =  203 bits (517), Expect = 1e-63
 Identities = 102/122 (83%), Positives = 108/122 (88%)
 Frame = -1

Query: 678 EGAEEELDADATKEDDVPDPLADGEDKQEQEQVERARKTSKYMTKYERARILGTRALQIS 499
           EGAEEE   +   +DDV     + E+K+EQE VER RKTSKYMTKYERARILGTRALQIS
Sbjct: 24  EGAEEEDVDNLNNDDDVAGDPIEAEEKEEQEGVERPRKTSKYMTKYERARILGTRALQIS 83

Query: 498 MNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG 319
           MNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG
Sbjct: 84  MNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVG 143

Query: 318 GD 313
           GD
Sbjct: 144 GD 145


Top