BLASTX nr result

ID: Acanthopanax21_contig00007354 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00007354
         (650 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM96077.1| hypothetical protein DCAR_019319 [Daucus carota s...    67   1e-09
ref|XP_017249599.1| PREDICTED: double-stranded RNA-binding prote...    67   1e-09
gb|AEC32111.1| hypothetical protein [Camellia sinensis]                57   5e-06

>gb|KZM96077.1| hypothetical protein DCAR_019319 [Daucus carota subsp. sativus]
          Length = 342

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = -1

Query: 644 SSKKLN-ASTMYTVVPGKKKVSDLGINSQETAAALXXXXXXXXXXXXXXXXXXXXKHVQD 468
           SS ++N +S+ YTVVPGKKKVSD  I +QETAAAL                        D
Sbjct: 193 SSMEVNTSSSTYTVVPGKKKVSDSVIKAQETAAALKPKKGRYKKRQRKRHYRDR----ND 248

Query: 467 KNTRGNLDVNTESKAVPEANKSDAVVAQVADSGLLPMEAIHDERLKFNGND 315
           +N   N++VN + +  P+   S  +VA   D+G  P   IH++  +F+G D
Sbjct: 249 QNANNNVNVNIDDQVAPDTVNSGVIVADTIDTGFTPEGEIHEKISEFSGGD 299


>ref|XP_017249599.1| PREDICTED: double-stranded RNA-binding protein 1 [Daucus carota
           subsp. sativus]
 ref|XP_017249600.1| PREDICTED: double-stranded RNA-binding protein 1 [Daucus carota
           subsp. sativus]
          Length = 350

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = -1

Query: 644 SSKKLN-ASTMYTVVPGKKKVSDLGINSQETAAALXXXXXXXXXXXXXXXXXXXXKHVQD 468
           SS ++N +S+ YTVVPGKKKVSD  I +QETAAAL                        D
Sbjct: 201 SSMEVNTSSSTYTVVPGKKKVSDSVIKAQETAAALKPKKGRYKKRQRKRHYRDR----ND 256

Query: 467 KNTRGNLDVNTESKAVPEANKSDAVVAQVADSGLLPMEAIHDERLKFNGND 315
           +N   N++VN + +  P+   S  +VA   D+G  P   IH++  +F+G D
Sbjct: 257 QNANNNVNVNIDDQVAPDTVNSGVIVADTIDTGFTPEGEIHEKISEFSGGD 307


>gb|AEC32111.1| hypothetical protein [Camellia sinensis]
          Length = 248

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
 Frame = -1

Query: 650 SLSSKKLNASTMYTVVPGKKKVSDLGINSQETAAAL-XXXXXXXXXXXXXXXXXXXXKHV 474
           S S++K   ++MYTV+P KKK +D GI +QETA AL                      H+
Sbjct: 59  SESNEKATGNSMYTVIPSKKKATDSGIGTQETATALKPKKSPFKKKSQRKRHVGDKGNHI 118

Query: 473 QDKNTRGNLDV---NTESKAVPEANKSDAVVAQVADSGLLPMEA---IHDERLKFNGNDG 312
           + +NT GNL+V   + E + +  AN         ADSGLL +E       +RL  NGN G
Sbjct: 119 KVENT-GNLEVLIDDREGQQLDHAN---------ADSGLLTLETKRNFQGQRLSSNGNGG 168

Query: 311 KPTVERGHLV 282
             +     LV
Sbjct: 169 HKSAVESALV 178


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