BLASTX nr result

ID: Acanthopanax21_contig00006301 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00006301
         (555 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZN00400.1| hypothetical protein DCAR_009154 [Daucus carota s...    52   5e-07
ref|XP_017239317.1| PREDICTED: transcription initiation factor T...    52   5e-07

>gb|KZN00400.1| hypothetical protein DCAR_009154 [Daucus carota subsp. sativus]
          Length = 711

 Score = 52.0 bits (123), Expect(2) = 5e-07
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +3

Query: 465 SAGQAGGNAKGHLKAPANIMGSPNPKIREA 554
           S GQAGGN KGHLK  ANI+GSPNP++R+A
Sbjct: 681 SGGQAGGNVKGHLKGAANIVGSPNPRMRDA 710



 Score = 29.3 bits (64), Expect(2) = 5e-07
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 421 KRSMVATETTNTKTS 465
           KRSM+ATETTNTK S
Sbjct: 667 KRSMLATETTNTKAS 681


>ref|XP_017239317.1| PREDICTED: transcription initiation factor TFIID subunit 12,
           partial [Daucus carota subsp. sativus]
          Length = 509

 Score = 52.0 bits (123), Expect(2) = 5e-07
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = +3

Query: 465 SAGQAGGNAKGHLKAPANIMGSPNPKIREA 554
           S GQAGGN KGHLK  ANI+GSPNP++R+A
Sbjct: 479 SGGQAGGNVKGHLKGAANIVGSPNPRMRDA 508



 Score = 29.3 bits (64), Expect(2) = 5e-07
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +1

Query: 421 KRSMVATETTNTKTS 465
           KRSM+ATETTNTK S
Sbjct: 465 KRSMLATETTNTKAS 479


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