BLASTX nr result
ID: Acanthopanax21_contig00005583
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00005583
(1170 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017242917.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 343 e-114
ref|XP_017246133.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 340 e-113
ref|XP_017249016.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 328 e-108
ref|XP_023744894.1| 29 kDa ribonucleoprotein A, chloroplastic-li... 321 e-105
gb|KVH90450.1| Nucleotide-binding, alpha-beta plait [Cynara card... 313 e-102
ref|XP_022000800.1| 29 kDa ribonucleoprotein A, chloroplastic-li... 312 e-102
ref|XP_022024445.1| 29 kDa ribonucleoprotein A, chloroplastic-li... 308 e-100
ref|NP_001289491.1| 29 kDa ribonucleoprotein A, chloroplastic [N... 301 1e-97
ref|XP_021621280.1| 29 kDa ribonucleoprotein, chloroplastic-like... 301 2e-97
ref|XP_018625142.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 298 2e-96
ref|XP_016496280.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 297 4e-96
ref|XP_016496282.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 296 1e-95
ref|XP_021683772.1| 29 kDa ribonucleoprotein A, chloroplastic-li... 296 2e-95
dbj|GAY63257.1| hypothetical protein CUMW_224140 [Citrus unshiu] 294 7e-95
ref|XP_022861161.1| 29 kDa ribonucleoprotein A, chloroplastic-li... 294 7e-95
ref|XP_006428771.1| RNA-binding protein CP29B, chloroplastic [Ci... 294 7e-95
ref|XP_009596607.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 293 1e-94
ref|XP_023767819.1| 29 kDa ribonucleoprotein A, chloroplastic-li... 293 3e-94
ref|XP_021289598.1| 29 kDa ribonucleoprotein, chloroplastic [Her... 292 3e-94
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 292 5e-94
>ref|XP_017242917.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Daucus carota
subsp. sativus]
Length = 289
Score = 343 bits (880), Expect = e-114
Identities = 185/265 (69%), Positives = 205/265 (77%), Gaps = 11/265 (4%)
Frame = +3
Query: 6 SSLINKPLPKLFTTYLSSSIKLFQISPPSRL-KVAISSDFGVAEDTST----------LX 152
S + NKPL SIK + SP SRL K+A+SSDFGV D ++
Sbjct: 37 SIITNKPL----------SIKFSRASPHSRLLKLAVSSDFGVEVDEASDAVAEEQGEISE 86
Query: 153 XXXXXXXXXXXXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRG 332
FSPDLK+FVGNLPFSCDSA LA LFE +GNV+MVEVIYDKI+GRSRG
Sbjct: 87 VGGEEEEPAREASFSPDLKIFVGNLPFSCDSATLAGLFESSGNVEMVEVIYDKISGRSRG 146
Query: 333 FGFVTMSTVEEVETAVQQFNGYELEGRALRVNSGPPPPREDNPFRAPXXXXXXXSFDNTN 512
FGFVTMS+VEEV+ AV+QFNGYEL+GR LRVNSGPPPPREDNPFRAP SFDNTN
Sbjct: 147 FGFVTMSSVEEVQAAVEQFNGYELDGRPLRVNSGPPPPREDNPFRAP--RSGGRSFDNTN 204
Query: 513 RLYVGNLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRAIDA 692
R+YVGNL+WGVDNLALETLFSEQGKV++AKVVYDR+SGRSRGFGFVTY SA+EVNRAIDA
Sbjct: 205 RVYVGNLSWGVDNLALETLFSEQGKVMEAKVVYDRESGRSRGFGFVTYGSANEVNRAIDA 264
Query: 693 LNGVDLDGRQIRVSVAEAPPMRRQY 767
LNG DLDGRQIRVSVAEAP MRRQY
Sbjct: 265 LNGADLDGRQIRVSVAEAPAMRRQY 289
>ref|XP_017246133.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Daucus
carota subsp. sativus]
gb|KZM97651.1| hypothetical protein DCAR_014987 [Daucus carota subsp. sativus]
Length = 278
Score = 340 bits (872), Expect = e-113
Identities = 179/248 (72%), Positives = 197/248 (79%), Gaps = 2/248 (0%)
Frame = +3
Query: 30 PKLFTTYLSS--SIKLFQISPPSRLKVAISSDFGVAEDTSTLXXXXXXXXXXXXXXFSPD 203
PK F LSS S KL++ + P LKVA+SSDFG+ E+ FSPD
Sbjct: 35 PKSFAASLSSCSSSKLYRAALP--LKVAVSSDFGLDEEEGAAALSSDVDEDVDDRSFSPD 92
Query: 204 LKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGFGFVTMSTVEEVETAVQ 383
LK+FVGNLPFSCDSALLA LF RAG V+MVEVIYDKITGRSRGF FVTMSTVEEVE AVQ
Sbjct: 93 LKIFVGNLPFSCDSALLAGLFGRAGTVEMVEVIYDKITGRSRGFAFVTMSTVEEVEAAVQ 152
Query: 384 QFNGYELEGRALRVNSGPPPPREDNPFRAPXXXXXXXSFDNTNRLYVGNLAWGVDNLALE 563
QFNGYEL+GR LRVNSGPPPPR++N FRAP SFDNTNRLYVGNL+W VDN+ LE
Sbjct: 153 QFNGYELDGRPLRVNSGPPPPRDENSFRAP--RGGGRSFDNTNRLYVGNLSWDVDNVTLE 210
Query: 564 TLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRAIDALNGVDLDGRQIRVSVAE 743
+ FSEQGKV+DAKVVYDR+SGRSRGFGFVTY S+DEVNRAID LNG DL+GRQIRVSVAE
Sbjct: 211 SFFSEQGKVLDAKVVYDRESGRSRGFGFVTYGSSDEVNRAIDNLNGADLEGRQIRVSVAE 270
Query: 744 APPMRRQY 767
APP RRQY
Sbjct: 271 APPPRRQY 278
>ref|XP_017249016.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Daucus
carota subsp. sativus]
gb|KZM94456.1| hypothetical protein DCAR_017699 [Daucus carota subsp. sativus]
Length = 282
Score = 328 bits (841), Expect = e-108
Identities = 176/254 (69%), Positives = 197/254 (77%), Gaps = 10/254 (3%)
Frame = +3
Query: 30 PKLFTTYLSSSI-----KLFQISPPSRLKVAISSDFGVAEDTSTLXXXXXXXXXXXXXXF 194
PK+F++ LS SI K+F+ SRL+VAI EDT+T F
Sbjct: 34 PKIFSSTLSLSISSSNTKVFKPVSCSRLRVAID------EDTTTFSSDLDEDEEEDNRSF 87
Query: 195 SPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGFGFVTMSTVEEVET 374
SPDLK+FVGNLPF+CDSA+LA LF RAG V+MVEVIYDKITGRSRGF FVTMSTV+EVE
Sbjct: 88 SPDLKLFVGNLPFNCDSAVLAGLFGRAGTVEMVEVIYDKITGRSRGFAFVTMSTVQEVEA 147
Query: 375 AVQQFNGYELEGRALRVNSGPPPPREDNPFRAP-----XXXXXXXSFDNTNRLYVGNLAW 539
A QQFNGYE+EGRALRVN GPPPPRE+N FRAP SFDNTNRLYVGNL+W
Sbjct: 148 AAQQFNGYEIEGRALRVNFGPPPPREENSFRAPRGGAGGGGGGGRSFDNTNRLYVGNLSW 207
Query: 540 GVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRAIDALNGVDLDGR 719
VDN+ALETLFSEQGKVVDAKVVYDR++GRSRGFGFVTY S++EVNRAID LNGVDL+GR
Sbjct: 208 DVDNVALETLFSEQGKVVDAKVVYDRETGRSRGFGFVTYGSSNEVNRAIDNLNGVDLEGR 267
Query: 720 QIRVSVAEAPPMRR 761
QIRVSVAEAPP RR
Sbjct: 268 QIRVSVAEAPPQRR 281
>ref|XP_023744894.1| 29 kDa ribonucleoprotein A, chloroplastic-like [Lactuca sativa]
gb|PLY65342.1| hypothetical protein LSAT_6X30901 [Lactuca sativa]
Length = 287
Score = 321 bits (823), Expect = e-105
Identities = 179/264 (67%), Positives = 203/264 (76%), Gaps = 9/264 (3%)
Frame = +3
Query: 3 PSSLINKPLPKLFTTYLSSSIKLFQISPPSRL--KVAISSDFGVAEDTSTLXXXXXXXXX 176
PSSL KPLPKLF+ + +S KLF+ SP SR+ VA+SS + E+ S+
Sbjct: 35 PSSL--KPLPKLFS--IPTSSKLFEASPSSRIFRSVAVSSGLELDEELSS------DGDD 84
Query: 177 XXXXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGFGFVTMST 356
FSPDLK+FVGNLPFS DSA LA LFE AGNV+MVEVIYDK++GRSRGFGFVTMS+
Sbjct: 85 EQQQNFSPDLKLFVGNLPFSVDSAALAGLFEGAGNVEMVEVIYDKVSGRSRGFGFVTMSS 144
Query: 357 VEEVETAVQQFNGYELEGRALRVNSGPPPPREDNPFRAPXXXXXXX-------SFDNTNR 515
VEEVE AVQ+FNGYELEGR +RVNSGPPP RE++ F +P SFDNTNR
Sbjct: 145 VEEVERAVQKFNGYELEGRQIRVNSGPPPKREESSFGSPREGGRFGGGGGGSRSFDNTNR 204
Query: 516 LYVGNLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRAIDAL 695
+YVGNLAW VDNLALETLF EQG VV+AKVVYDR+SGRSRGFGFVTYSSADEVN AID+L
Sbjct: 205 VYVGNLAWSVDNLALETLFREQGNVVEAKVVYDRESGRSRGFGFVTYSSADEVNSAIDSL 264
Query: 696 NGVDLDGRQIRVSVAEAPPMRRQY 767
NGVDLDGR IRVSVAEA P RRQ+
Sbjct: 265 NGVDLDGRNIRVSVAEA-PQRRQF 287
>gb|KVH90450.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 301
Score = 313 bits (802), Expect = e-102
Identities = 172/258 (66%), Positives = 197/258 (76%), Gaps = 6/258 (2%)
Frame = +3
Query: 3 PSSLINKPLPKLFTTYLSSSIKLFQISPPSRL--KVAISSDFGVAEDTSTLXXXXXXXXX 176
PSSL KPLPKLF+ + +S KLF+ +P SR+ VA+SS + E S+
Sbjct: 35 PSSL--KPLPKLFS--VPTSAKLFEATPSSRIIRNVAVSSGLELDEGLSS------DGDD 84
Query: 177 XXXXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGFGFVTMST 356
FSPDLK+FVGNLPF+ DSA LA LFE AGNV+MVEVIYDK++GRSRGFGFVTMS+
Sbjct: 85 EQQQNFSPDLKLFVGNLPFTVDSAALAGLFESAGNVEMVEVIYDKVSGRSRGFGFVTMSS 144
Query: 357 VEEVETAVQQFNGYELEGRALRVNSGPPPPREDNPFRAP----XXXXXXXSFDNTNRLYV 524
VEEV+ AVQ+FNGYELEGR LRVNSGPPP RE++ F P SFDNTNR+YV
Sbjct: 145 VEEVQEAVQKFNGYELEGRQLRVNSGPPPRREESSFGGPREGGRFGGGGRSFDNTNRVYV 204
Query: 525 GNLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRAIDALNGV 704
GNLAW VDNLALETLF EQG V++AKVVYDR+SGRSRGFGFVTYSSADEVN AI++LNG
Sbjct: 205 GNLAWSVDNLALETLFREQGNVMEAKVVYDRESGRSRGFGFVTYSSADEVNNAIESLNGA 264
Query: 705 DLDGRQIRVSVAEAPPMR 758
DLDGR IRVSVAEAP R
Sbjct: 265 DLDGRNIRVSVAEAPQKR 282
>ref|XP_022000800.1| 29 kDa ribonucleoprotein A, chloroplastic-like [Helianthus annuus]
ref|XP_022000801.1| 29 kDa ribonucleoprotein A, chloroplastic-like [Helianthus annuus]
Length = 281
Score = 312 bits (799), Expect = e-102
Identities = 176/260 (67%), Positives = 200/260 (76%), Gaps = 5/260 (1%)
Frame = +3
Query: 3 PSSLINKPLPKLFTTYLSSSIKLFQISPPSRL--KVAISSDFGVAEDTSTLXXXXXXXXX 176
P+SL KP PKL SS KLF+ +P SR+ VA+S+ V E+ S+
Sbjct: 36 PASL--KPFPKLL-----SSNKLFEPTPSSRIIRTVAVSTGLEVDEELSS------DGDD 82
Query: 177 XXXXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGFGFVTMST 356
FSPDLK+FVGNLPFS DSA LA LFE AGNV+MVEVIYDK++GRSRGFGFVTMS+
Sbjct: 83 EQEQSFSPDLKIFVGNLPFSVDSAALAGLFESAGNVEMVEVIYDKVSGRSRGFGFVTMSS 142
Query: 357 VEEVETAVQQFNGYELEGRALRVNSGPPPPR-EDNPF--RAPXXXXXXXSFDNTNRLYVG 527
VEEVE AV++FNGYEL+GRALRVNSGPPPPR E++ F + SFDNTNR+YVG
Sbjct: 143 VEEVEEAVRKFNGYELDGRALRVNSGPPPPRREESSFGGQREGRGGGGRSFDNTNRVYVG 202
Query: 528 NLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRAIDALNGVD 707
NLAW VDNLALETLF EQG V+DAKVVYDR+SGRSRGFGFVTYSSADEVN AID+LNGVD
Sbjct: 203 NLAWSVDNLALETLFREQGNVLDAKVVYDRESGRSRGFGFVTYSSADEVNSAIDSLNGVD 262
Query: 708 LDGRQIRVSVAEAPPMRRQY 767
LDGR IRVSVAEA P RRQ+
Sbjct: 263 LDGRNIRVSVAEA-PQRRQF 281
>ref|XP_022024445.1| 29 kDa ribonucleoprotein A, chloroplastic-like [Helianthus annuus]
gb|OTG35028.1| putative RNA-binding (RRM/RBD/RNP motifs) family protein
[Helianthus annuus]
Length = 278
Score = 308 bits (789), Expect = e-100
Identities = 173/261 (66%), Positives = 197/261 (75%), Gaps = 6/261 (2%)
Frame = +3
Query: 3 PSSLINKPLPKLFTTYLSSSIKLFQISPPSRL--KVAISSDFGVAEDTSTLXXXXXXXXX 176
PSSL P PKL S LF+ +P SR+ VA+SS F + E+ S
Sbjct: 35 PSSLT--PFPKLLC-----STTLFEPTPSSRITRNVAVSSGFELDEELSD---------D 78
Query: 177 XXXXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGFGFVTMST 356
FSPDLK+FVGN+PFS DSA LA LFE AGNV+MVEVIYDK+TGRSRGFGFVTMS+
Sbjct: 79 QQEQSFSPDLKIFVGNMPFSVDSAALAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSS 138
Query: 357 VEEVETAVQQFNGYELEGRALRVNSGPPPP-REDNPFRAP---XXXXXXXSFDNTNRLYV 524
VEEVE AV++FNGYEL+GRALRVNSGPPPP RED+ F P SFDNTNR+YV
Sbjct: 139 VEEVEEAVRKFNGYELDGRALRVNSGPPPPRREDSSFGGPREGGRGGGGRSFDNTNRVYV 198
Query: 525 GNLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRAIDALNGV 704
GNLAW VDN+ALETLF EQG VV+AKVVYDR+SGRSRGFGFVT+SSADEVN A+D+L+GV
Sbjct: 199 GNLAWSVDNVALETLFREQGNVVEAKVVYDRESGRSRGFGFVTFSSADEVNSAVDSLDGV 258
Query: 705 DLDGRQIRVSVAEAPPMRRQY 767
DLDGR IRVSVAEA P RRQ+
Sbjct: 259 DLDGRNIRVSVAEA-PQRRQF 278
>ref|NP_001289491.1| 29 kDa ribonucleoprotein A, chloroplastic [Nicotiana sylvestris]
ref|XP_009781507.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Nicotiana
sylvestris]
ref|XP_016506211.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Nicotiana
tabacum]
ref|XP_016506212.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Nicotiana
tabacum]
ref|XP_019257248.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Nicotiana
attenuata]
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor
emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
gb|OIS96183.1| 29 kda ribonucleoprotein a, chloroplastic [Nicotiana attenuata]
Length = 273
Score = 301 bits (770), Expect = 1e-97
Identities = 170/265 (64%), Positives = 193/265 (72%), Gaps = 17/265 (6%)
Frame = +3
Query: 24 PLPKLFTTYLSSSIKLFQISPPSRLKVAISS----------------DFGVAEDTSTLXX 155
PLPK T ++S+ F + PPS L +++SS DF ED
Sbjct: 19 PLPK--PTSQTTSLSFFSL-PPSSLNLSLSSSSSCFSSRFVRKVTLSDFDQIEDVED--- 72
Query: 156 XXXXXXXXXXXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGF 335
FSPDLK+FVGNLPFS DSA LAELFERAGNV+MVEVIYDK+TGRSRGF
Sbjct: 73 --GDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGF 130
Query: 336 GFVTMSTVEEVETAVQQFNGYELEGRALRVNSGPPP-PREDNPFRAPXXXXXXXSFDNTN 512
GFVTMS+ EEVE A QQFNGYEL+GRALRVNSGPPP RE++ FR SFD++N
Sbjct: 131 GFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRG--GSRGGGSFDSSN 188
Query: 513 RLYVGNLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRAIDA 692
R+YVGNLAWGVD ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSA+EVN AI++
Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 248
Query: 693 LNGVDLDGRQIRVSVAEAPPMRRQY 767
L+GVDL+GR IRVS AEA P RRQ+
Sbjct: 249 LDGVDLNGRAIRVSPAEARPPRRQF 273
>ref|XP_021621280.1| 29 kDa ribonucleoprotein, chloroplastic-like [Manihot esculenta]
gb|OAY42685.1| hypothetical protein MANES_08G008000 [Manihot esculenta]
gb|OAY42686.1| hypothetical protein MANES_08G008000 [Manihot esculenta]
Length = 280
Score = 301 bits (770), Expect = 2e-97
Identities = 167/269 (62%), Positives = 194/269 (72%), Gaps = 19/269 (7%)
Frame = +3
Query: 18 NKPLPKLFTTYLSSSIKLFQ---ISPPSRL----------------KVAISSDFGVAEDT 140
NKP+ F + SSS++L I+ P+ VA+SS+FG E+
Sbjct: 25 NKPISLFFVSPASSSLRLHAKGFIATPTLFHSVGALRQSFSSRFVPNVAVSSEFGQEEEV 84
Query: 141 STLXXXXXXXXXXXXXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITG 320
++ FSPDLK+FVGNLPFS DSA LA LFE AGNV+MVEVIYDK+TG
Sbjct: 85 TS---------DGDEPSFSPDLKLFVGNLPFSVDSAQLAGLFESAGNVEMVEVIYDKVTG 135
Query: 321 RSRGFGFVTMSTVEEVETAVQQFNGYELEGRALRVNSGPPPPREDNPFRAPXXXXXXXSF 500
RSRGFGFVTMST+EE E A QQFNGYELEGRALRVNSGPPP RE + R P +F
Sbjct: 136 RSRGFGFVTMSTIEEAEAAAQQFNGYELEGRALRVNSGPPPQRETSFSRGP---RGGEAF 192
Query: 501 DNTNRLYVGNLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNR 680
D+ NRLYVGNL+WGVDNLALE LFSEQG+VV+AKVVYDRDSGRSRGFGFVTYSSA+EV
Sbjct: 193 DSANRLYVGNLSWGVDNLALENLFSEQGRVVEAKVVYDRDSGRSRGFGFVTYSSAEEVET 252
Query: 681 AIDALNGVDLDGRQIRVSVAEAPPMRRQY 767
AI++LNGV+LDGR IRVS+AEA P RRQ+
Sbjct: 253 AIESLNGVELDGRAIRVSIAEARP-RRQF 280
>ref|XP_018625142.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic isoform X2
[Nicotiana tomentosiformis]
Length = 272
Score = 298 bits (762), Expect = 2e-96
Identities = 167/265 (63%), Positives = 192/265 (72%), Gaps = 17/265 (6%)
Frame = +3
Query: 24 PLPKLFTTYLSSSIKLFQISPPSRLKVAISS----------------DFGVAEDTSTLXX 155
PLPK T ++S+ F + PPS L ++++S DF ED
Sbjct: 19 PLPK--PTSQTTSLSFFSL-PPSSLNLSLTSSSSCFSSRFVRKVTLSDFDQIEDVED--- 72
Query: 156 XXXXXXXXXXXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGF 335
FSPDLK+FVGNLPFS DSA LAELFERAGNV+MVEVIYDK+TGRSRGF
Sbjct: 73 --GDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGF 130
Query: 336 GFVTMSTVEEVETAVQQFNGYELEGRALRVNSGPPPPREDN-PFRAPXXXXXXXSFDNTN 512
GFVTMS+ EEVE A QQFNGYEL+GRALRVN+GPPP R +N FR SFD++N
Sbjct: 131 GFVTMSSKEEVEAACQQFNGYELDGRALRVNAGPPPERRENSSFRG---GRGGGSFDSSN 187
Query: 513 RLYVGNLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRAIDA 692
R+YVGNLAWGVD ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYS+A+EVN AI++
Sbjct: 188 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSTAEEVNNAIES 247
Query: 693 LNGVDLDGRQIRVSVAEAPPMRRQY 767
L+GVDL+GR IRVS AEA P RRQ+
Sbjct: 248 LDGVDLNGRAIRVSPAEARPPRRQF 272
>ref|XP_016496280.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like isoform
X1 [Nicotiana tabacum]
ref|XP_016496281.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like isoform
X1 [Nicotiana tabacum]
Length = 284
Score = 297 bits (761), Expect = 4e-96
Identities = 169/274 (61%), Positives = 194/274 (70%), Gaps = 26/274 (9%)
Frame = +3
Query: 24 PLPKLFTTYLSSSIKLFQISPPSRLKVAISS----------------DFGVAEDTSTLXX 155
PLPK T ++S+ F + PPS L ++++S DFG ED
Sbjct: 19 PLPK--PTSQTTSLSFFSL-PPSSLNLSLTSSSSCFSSRFVRKVTLSDFGQIEDVED--- 72
Query: 156 XXXXXXXXXXXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGF 335
FSPDLK+FVGNLPFS DSA LAELFERAGNV+MVEVIYDK+TGRSRGF
Sbjct: 73 --GDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGF 130
Query: 336 GFVTMSTVEEVETAVQQFNGYELEGRALRVNSGPPPPREDN-PFR---------APXXXX 485
GFVTMS+ EEVE A QQFNGYEL+GRALRVN+GPPP R +N FR +
Sbjct: 131 GFVTMSSKEEVEAACQQFNGYELDGRALRVNAGPPPERRENSSFRENSSFRENSSFRGGR 190
Query: 486 XXXSFDNTNRLYVGNLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSA 665
SFD++NR+YVGNLAWGVD ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSA
Sbjct: 191 GGESFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSA 250
Query: 666 DEVNRAIDALNGVDLDGRQIRVSVAEAPPMRRQY 767
+EVN AI++L+GVDL+GR IRVS AEA P RRQ+
Sbjct: 251 EEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 284
>ref|XP_016496282.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like isoform
X2 [Nicotiana tabacum]
Length = 284
Score = 296 bits (758), Expect = 1e-95
Identities = 168/274 (61%), Positives = 194/274 (70%), Gaps = 26/274 (9%)
Frame = +3
Query: 24 PLPKLFTTYLSSSIKLFQISPPSRLKVAISS----------------DFGVAEDTSTLXX 155
PLPK T ++S+ F + PPS L ++++S DFG ED
Sbjct: 19 PLPK--PTSQTTSLSFFSL-PPSSLNLSLTSSSSCFSSRFVRKVTLSDFGQIEDVED--- 72
Query: 156 XXXXXXXXXXXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGF 335
FSPDLK+FVGNLPFS DSA LAELFERAGNV+MVEVIYDK+TGRSRGF
Sbjct: 73 --GDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGF 130
Query: 336 GFVTMSTVEEVETAVQQFNGYELEGRALRVNSGPPPPREDN-PFR---------APXXXX 485
GFVTMS+ EEVE A QQFNGYEL+GRALRVN+GPPP R +N FR +
Sbjct: 131 GFVTMSSKEEVEAACQQFNGYELDGRALRVNAGPPPERRENSSFRENSSFRENSSFRGGR 190
Query: 486 XXXSFDNTNRLYVGNLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSA 665
SFD++NR+YVGNLAWGVD ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYS+A
Sbjct: 191 GGESFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSTA 250
Query: 666 DEVNRAIDALNGVDLDGRQIRVSVAEAPPMRRQY 767
+EVN AI++L+GVDL+GR IRVS AEA P RRQ+
Sbjct: 251 EEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 284
>ref|XP_021683772.1| 29 kDa ribonucleoprotein A, chloroplastic-like [Hevea brasiliensis]
Length = 304
Score = 296 bits (759), Expect = 2e-95
Identities = 161/224 (71%), Positives = 178/224 (79%), Gaps = 2/224 (0%)
Frame = +3
Query: 102 VAISSDFG--VAEDTSTLXXXXXXXXXXXXXXFSPDLKVFVGNLPFSCDSALLAELFERA 275
VAISS+FG VA D FSPDLK+FVGNLPFS DSA LA LFE A
Sbjct: 98 VAISSEFGEEVASDGDD-------------PTFSPDLKLFVGNLPFSVDSAQLAGLFESA 144
Query: 276 GNVQMVEVIYDKITGRSRGFGFVTMSTVEEVETAVQQFNGYELEGRALRVNSGPPPPRED 455
GNV+MVEVIYDK+TGRSRGFGFVTMST EEVE A QQFNGYELEGR LRVNSGPPP RE
Sbjct: 145 GNVEMVEVIYDKVTGRSRGFGFVTMSTTEEVEAAAQQFNGYELEGRPLRVNSGPPPQREA 204
Query: 456 NPFRAPXXXXXXXSFDNTNRLYVGNLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSR 635
+ R+P +FD+ NRLYVGNL+WGVDNLALETLFSEQGKVV+AKV+YDR+SGRSR
Sbjct: 205 SSNRSP---RGGDTFDSANRLYVGNLSWGVDNLALETLFSEQGKVVEAKVIYDRESGRSR 261
Query: 636 GFGFVTYSSADEVNRAIDALNGVDLDGRQIRVSVAEAPPMRRQY 767
GFGFVTYSSA+EV AI++LNGV+LDGR IRVSVAEA P RRQ+
Sbjct: 262 GFGFVTYSSAEEVENAIESLNGVELDGRAIRVSVAEARP-RRQF 304
>dbj|GAY63257.1| hypothetical protein CUMW_224140 [Citrus unshiu]
Length = 282
Score = 294 bits (753), Expect = 7e-95
Identities = 164/243 (67%), Positives = 182/243 (74%), Gaps = 5/243 (2%)
Frame = +3
Query: 54 SSSIKLFQISP--PSRL--KVAISSDFGVAEDTSTLXXXXXXXXXXXXXXFSPDLKVFVG 221
SS I FQ P PSR VA+SS+F ED + FSPDLK+FVG
Sbjct: 49 SSFIHSFQPLPSSPSRFVRNVAVSSEFDQEEDLLS---------DEDGSNFSPDLKLFVG 99
Query: 222 NLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGFGFVTMSTVEEVETAVQQFNGYE 401
NLPFS DSA LA LFE AGNV+MVEVIYDK+TGRSRGFGFVTMS+VEEVE A QQFNGYE
Sbjct: 100 NLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYE 159
Query: 402 LEGRALRVNSGPPPP-REDNPFRAPXXXXXXXSFDNTNRLYVGNLAWGVDNLALETLFSE 578
LEGR LRVNSGPPPP RE+ R P NR+YVGNL+WGVD+LALETLF E
Sbjct: 160 LEGRPLRVNSGPPPPRREEFSPRGPRGGGSGAPSSGGNRVYVGNLSWGVDDLALETLFRE 219
Query: 579 QGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRAIDALNGVDLDGRQIRVSVAEAPPMR 758
QGKV++AKVVYDR+SGRSRGFGFVTYSSA+EV+ AID+LNGVDL GR IRVSVAEA P R
Sbjct: 220 QGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQR 279
Query: 759 RQY 767
RQ+
Sbjct: 280 RQF 282
>ref|XP_022861161.1| 29 kDa ribonucleoprotein A, chloroplastic-like isoform X2 [Olea
europaea var. sylvestris]
ref|XP_022861162.1| 29 kDa ribonucleoprotein A, chloroplastic-like isoform X2 [Olea
europaea var. sylvestris]
Length = 282
Score = 294 bits (753), Expect = 7e-95
Identities = 162/255 (63%), Positives = 187/255 (73%)
Frame = +3
Query: 3 PSSLINKPLPKLFTTYLSSSIKLFQISPPSRLKVAISSDFGVAEDTSTLXXXXXXXXXXX 182
PSSL KPLPKL + S + S +R KVA+SS E+ +
Sbjct: 32 PSSL--KPLPKLTISISSRNCNGETTSKFTR-KVAVSSALDELEEEAGEENEGFDFSSPE 88
Query: 183 XXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGFGFVTMSTVE 362
FSPDLK+FVGNLPF+ DSA LA LFE+AGNV+MVEVIYDK+TGRSRGFGFVTMST E
Sbjct: 89 DPSFSPDLKLFVGNLPFNVDSAALAGLFEQAGNVEMVEVIYDKLTGRSRGFGFVTMSTAE 148
Query: 363 EVETAVQQFNGYELEGRALRVNSGPPPPREDNPFRAPXXXXXXXSFDNTNRLYVGNLAWG 542
E +A QQFNGYE EGR LRVN+GPPPP+ +N S D+ NR+YVGNLAWG
Sbjct: 149 EAASAAQQFNGYEFEGRQLRVNNGPPPPKRENSSFGGPRGGSGTSSDSGNRVYVGNLAWG 208
Query: 543 VDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRAIDALNGVDLDGRQ 722
VDNLALETLFSEQGKV++AKVVYDR+SGRSRGFGFVTYSSADEV A+++LNG+DLDGR
Sbjct: 209 VDNLALETLFSEQGKVMEAKVVYDRESGRSRGFGFVTYSSADEVYNAVESLNGMDLDGRS 268
Query: 723 IRVSVAEAPPMRRQY 767
IRVS AEA P RRQ+
Sbjct: 269 IRVSPAEARP-RRQF 282
>ref|XP_006428771.1| RNA-binding protein CP29B, chloroplastic [Citrus clementina]
ref|XP_006481497.1| PREDICTED: RNA-binding protein CP29B, chloroplastic [Citrus
sinensis]
gb|ESR42011.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
Length = 282
Score = 294 bits (753), Expect = 7e-95
Identities = 164/243 (67%), Positives = 182/243 (74%), Gaps = 5/243 (2%)
Frame = +3
Query: 54 SSSIKLFQISP--PSRL--KVAISSDFGVAEDTSTLXXXXXXXXXXXXXXFSPDLKVFVG 221
SS I FQ P PSR VA+SS+F ED + FSPDLK+FVG
Sbjct: 49 SSFIHSFQPLPSSPSRFVRNVAVSSEFDQEEDLLS---------DEDGSNFSPDLKLFVG 99
Query: 222 NLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGFGFVTMSTVEEVETAVQQFNGYE 401
NLPFS DSA LA LFE AGNV+MVEVIYDK+TGRSRGFGFVTMS+VEEVE A QQFNGYE
Sbjct: 100 NLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYE 159
Query: 402 LEGRALRVNSGPPPP-REDNPFRAPXXXXXXXSFDNTNRLYVGNLAWGVDNLALETLFSE 578
LEGR LRVNSGPPPP RE+ R P NR+YVGNL+WGVD+LALETLF E
Sbjct: 160 LEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSSGGNRVYVGNLSWGVDDLALETLFRE 219
Query: 579 QGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRAIDALNGVDLDGRQIRVSVAEAPPMR 758
QGKV++AKVVYDR+SGRSRGFGFVTYSSA+EV+ AID+LNGVDL GR IRVSVAEA P R
Sbjct: 220 QGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQR 279
Query: 759 RQY 767
RQ+
Sbjct: 280 RQF 282
>ref|XP_009596607.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic isoform X1
[Nicotiana tomentosiformis]
ref|XP_009596608.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic isoform X1
[Nicotiana tomentosiformis]
Length = 284
Score = 293 bits (751), Expect = 1e-94
Identities = 167/274 (60%), Positives = 193/274 (70%), Gaps = 26/274 (9%)
Frame = +3
Query: 24 PLPKLFTTYLSSSIKLFQISPPSRLKVAISS----------------DFGVAEDTSTLXX 155
PLPK T ++S+ F + PPS L ++++S DF ED
Sbjct: 19 PLPK--PTSQTTSLSFFSL-PPSSLNLSLTSSSSCFSSRFVRKVTLSDFDQIEDVED--- 72
Query: 156 XXXXXXXXXXXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGF 335
FSPDLK+FVGNLPFS DSA LAELFERAGNV+MVEVIYDK+TGRSRGF
Sbjct: 73 --GDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGF 130
Query: 336 GFVTMSTVEEVETAVQQFNGYELEGRALRVNSGPPPPREDN-PFR---------APXXXX 485
GFVTMS+ EEVE A QQFNGYEL+GRALRVN+GPPP R +N FR +
Sbjct: 131 GFVTMSSKEEVEAACQQFNGYELDGRALRVNAGPPPERRENSSFRENSSFRENSSFRGGR 190
Query: 486 XXXSFDNTNRLYVGNLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSA 665
SFD++NR+YVGNLAWGVD ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYS+A
Sbjct: 191 GGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSTA 250
Query: 666 DEVNRAIDALNGVDLDGRQIRVSVAEAPPMRRQY 767
+EVN AI++L+GVDL+GR IRVS AEA P RRQ+
Sbjct: 251 EEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 284
>ref|XP_023767819.1| 29 kDa ribonucleoprotein A, chloroplastic-like isoform X2 [Lactuca
sativa]
Length = 288
Score = 293 bits (749), Expect = 3e-94
Identities = 159/273 (58%), Positives = 197/273 (72%), Gaps = 18/273 (6%)
Frame = +3
Query: 3 PSSLIN-----KPLPKLFTTYLSSSIKLFQISPPSRL--KVAISSDFGVAEDTSTLXXXX 161
PS+L N P PKLF+ + +SIKLF+ +P S+ A++S +G+ ED S+
Sbjct: 25 PSALCNFPSSINPFPKLFS--IPTSIKLFEATPSSKFVRNFAVASPYGLDEDLSS----- 77
Query: 162 XXXXXXXXXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGFGF 341
+SPDLKV+VGNLP++ DSA LA LF+RAGNV+MVEV+YDKITGRSRGFGF
Sbjct: 78 -DGDEDQRTNYSPDLKVYVGNLPWNVDSAALAGLFQRAGNVEMVEVVYDKITGRSRGFGF 136
Query: 342 VTMSTVEEVETAVQQFNGYELEGRALRVNSGPPPPREDNPFRAP-----------XXXXX 488
VTMS+V+EVE A +QFNGYELEGR LRVNSGPPP R+++PFR
Sbjct: 137 VTMSSVKEVEAATRQFNGYELEGRQLRVNSGPPPSRDESPFRGSRDGGRDGGRGGGGYGG 196
Query: 489 XXSFDNTNRLYVGNLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAD 668
+ DNTN++YVGNLAW VDNLALETLF EQG V++A+VVYDRDSGRS+GFGFVT+ SAD
Sbjct: 197 GRNLDNTNKVYVGNLAWSVDNLALETLFQEQGNVMEARVVYDRDSGRSKGFGFVTFGSAD 256
Query: 669 EVNRAIDALNGVDLDGRQIRVSVAEAPPMRRQY 767
EVN AI++L+G +DGR IRV+VAEA R QY
Sbjct: 257 EVNSAIESLDGASVDGRNIRVTVAEA-KQRPQY 288
>ref|XP_021289598.1| 29 kDa ribonucleoprotein, chloroplastic [Herrania umbratica]
Length = 279
Score = 292 bits (748), Expect = 3e-94
Identities = 163/246 (66%), Positives = 185/246 (75%), Gaps = 2/246 (0%)
Frame = +3
Query: 36 LFTTYLSSSIKLFQISPPSRL--KVAISSDFGVAEDTSTLXXXXXXXXXXXXXXFSPDLK 209
LF + L S L + S SR VAISS++G ED FSPDLK
Sbjct: 43 LFCSALQSFELLTKKSSSSRFVRNVAISSEYGQEEDL------FGSDDGEEAPSFSPDLK 96
Query: 210 VFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGFGFVTMSTVEEVETAVQQF 389
+FVGNLPFS DSA LA LFE AGNV+MVEVIYDK+TGRSRGFGFVTMST EEVE A QQF
Sbjct: 97 LFVGNLPFSVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAEEVEAAAQQF 156
Query: 390 NGYELEGRALRVNSGPPPPREDNPFRAPXXXXXXXSFDNTNRLYVGNLAWGVDNLALETL 569
NGYELEGRALRVNSGPPPPR + +P + +NR+YVGNL+WGVD+LALETL
Sbjct: 157 NGYELEGRALRVNSGPPPPRREE--FSPRGSRGAPALGASNRVYVGNLSWGVDDLALETL 214
Query: 570 FSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRAIDALNGVDLDGRQIRVSVAEAP 749
FSEQGKVV+AKVVYDR+SGRSRGFGFVTY+SA+EV+ AI +LNGVDLDGR IRVSVAE+
Sbjct: 215 FSEQGKVVEAKVVYDRESGRSRGFGFVTYNSAEEVDSAIKSLNGVDLDGRPIRVSVAESR 274
Query: 750 PMRRQY 767
P RRQ+
Sbjct: 275 P-RRQF 279
>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor
emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 292 bits (747), Expect = 5e-94
Identities = 168/268 (62%), Positives = 191/268 (71%), Gaps = 21/268 (7%)
Frame = +3
Query: 27 LPKLFTTYLSSSIKLFQISPPSRLKVAISS----------------DFGVAEDTSTLXXX 158
LPK T ++S+ F + PPS L +++SS DF ED
Sbjct: 20 LPK--PTSQTTSLSFFSL-PPSSLNLSLSSPSSCFSSRFVRKVTLPDFDQIEDVED---- 72
Query: 159 XXXXXXXXXXXFSPDLKVFVGNLPFSCDSALLAELFERAGNVQMVEVIYDKITGRSRGFG 338
FSPDLK+FVGNL FS DSA LAELFERAGNV+MVEVIYDK+TGRSRGFG
Sbjct: 73 -GDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFG 131
Query: 339 FVTMSTVEEVETAVQQFNGYELEGRALRVNSGPPP-PREDNPFRA----PXXXXXXXSFD 503
FVTMS+ EEVE A QQFNGYEL+GRALRVNSGPPP RE++ FR SFD
Sbjct: 132 FVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFD 191
Query: 504 NTNRLYVGNLAWGVDNLALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSADEVNRA 683
++NR+YVGNLAWGVD ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSA+EVN A
Sbjct: 192 SSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNA 251
Query: 684 IDALNGVDLDGRQIRVSVAEAPPMRRQY 767
I++L+GVDL+GR IRVS AEA P RRQ+
Sbjct: 252 IESLDGVDLNGRAIRVSPAEARPPRRQF 279