BLASTX nr result

ID: Acanthopanax21_contig00004942 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00004942
         (401 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006291806.1| orf36 (mitochondrion) [Daucus carota subsp. ...    84   1e-17

>ref|YP_006291806.1| orf36 (mitochondrion) [Daucus carota subsp. sativus]
 gb|AEY81174.1| orf36 (mitochondrion) [Daucus carota subsp. sativus]
          Length = 155

 Score = 83.6 bits (205), Expect = 1e-17
 Identities = 38/47 (80%), Positives = 40/47 (85%)
 Frame = +1

Query: 244 DGFRRSNENSFLPFLPLWLDYSACLTQVLFNLHGPLHYPASSGSKAT 384
           D     NE+SFL FLP+WLDYSACLTQVLFNLHGPLHYPAS GSKAT
Sbjct: 108 DALIEENEDSFLLFLPIWLDYSACLTQVLFNLHGPLHYPASVGSKAT 154


Top