BLASTX nr result

ID: Acanthopanax21_contig00004290 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00004290
         (706 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM87791.1| hypothetical protein DCAR_024892 [Daucus carota s...    59   1e-06
ref|XP_017215746.1| PREDICTED: leucine-rich repeat-containing pr...    59   1e-06

>gb|KZM87791.1| hypothetical protein DCAR_024892 [Daucus carota subsp. sativus]
          Length = 428

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 34/62 (54%), Positives = 40/62 (64%)
 Frame = +2

Query: 2   ENAINHLERMEKKSNQGANTVGGMVTFPKKKKKIKSQAVGSSALQSLTQAAEIGLGGSSA 181
           ENA+   E M+ K  Q  ++ G  VTFPK KKK K    G+SALQSL  A EIGLGG SA
Sbjct: 368 ENAVTQNENMKLK--QDIHSGGEAVTFPKNKKKNKGGISGASALQSLMPANEIGLGGPSA 425

Query: 182 WD 187
           W+
Sbjct: 426 WN 427


>ref|XP_017215746.1| PREDICTED: leucine-rich repeat-containing protein ODA7 isoform X1
           [Daucus carota subsp. sativus]
 ref|XP_017215747.1| PREDICTED: leucine-rich repeat-containing protein ODA7 isoform X2
           [Daucus carota subsp. sativus]
          Length = 479

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 34/62 (54%), Positives = 40/62 (64%)
 Frame = +2

Query: 2   ENAINHLERMEKKSNQGANTVGGMVTFPKKKKKIKSQAVGSSALQSLTQAAEIGLGGSSA 181
           ENA+   E M+ K  Q  ++ G  VTFPK KKK K    G+SALQSL  A EIGLGG SA
Sbjct: 419 ENAVTQNENMKLK--QDIHSGGEAVTFPKNKKKNKGGISGASALQSLMPANEIGLGGPSA 476

Query: 182 WD 187
           W+
Sbjct: 477 WN 478


Top