BLASTX nr result

ID: Acanthopanax21_contig00004111 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00004111
         (456 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBX33251.1| hypothetical protein (mitochondrion) [Beta vulga...    54   2e-06

>emb|CBX33251.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 110

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 44/99 (44%), Positives = 51/99 (51%)
 Frame = +3

Query: 72  GWLLTNEKHGIKMHKEIRFGMSAPTDHENFIIHLTIFTFAAHFLYLSLFYRLRAIGEREQ 251
           GWLLTN        +      S     +  I+H T        L + L YRLRAIGER  
Sbjct: 9   GWLLTNNA----WDRHCLSPFSKKDWLQRNILHCT--------LSICLSYRLRAIGERTT 56

Query: 252 GGVKSKTFIYRALNSMIKQYFSLSIRNFDKSLASSSLQY 368
           GG  S   IYRA++S   +   L IRNFDKSLASSS QY
Sbjct: 57  GG--SVKNIYRAIHS---ESLFLYIRNFDKSLASSSPQY 90


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