BLASTX nr result

ID: Acanthopanax21_contig00004026 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00004026
         (885 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPS08355.1| hypothetical protein GOBAR_AA12284 [Gossypium bar...    87   3e-15

>gb|PPS08355.1| hypothetical protein GOBAR_AA12284 [Gossypium barbadense]
          Length = 555

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 51/102 (50%), Positives = 59/102 (57%)
 Frame = +3

Query: 3   PLWKLGDQXXXXXXXXXXXXERKCAFMVYGNSSPLRDRLGHDGYDILLGVLPHYRKRTTG 182
           PLWKL DQ            +RKCAF+VY NSSPLR RLGHD YDILLGVLPHYR  T  
Sbjct: 457 PLWKLSDQSSLASKAVYSVSKRKCAFLVYCNSSPLRGRLGHDVYDILLGVLPHYRDPT-- 514

Query: 183 IRRRFLSWKRCLEISRPSAKKLVPW*DRWMKPILLDSKPNGD 308
           +        +  ++ R     +V   D  +  ILLDSKPNGD
Sbjct: 515 LLLVLGKMPQNFKVKREETCSMVGLMDEAI-TILLDSKPNGD 555


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