BLASTX nr result

ID: Acanthopanax21_contig00003993 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00003993
         (501 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU19234.1| hypothetical protein TSUD_199160, partial [Trifo...    83   1e-17
ref|YP_009381683.1| hypothetical protein AEK19_MT1267 (mitochond...    44   3e-07

>dbj|GAU19234.1| hypothetical protein TSUD_199160, partial [Trifolium subterraneum]
          Length = 88

 Score = 82.8 bits (203), Expect = 1e-17
 Identities = 42/50 (84%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
 Frame = -3

Query: 421 LFPLRGELGLTTHSYDRSSILTFDGNKERLQRSHQGLPSDRGRHF-KRGF 275
           L P +GELGLTTHS DRSSILT  GNKERLQRSHQGLPSDRGRHF  RGF
Sbjct: 37  LRPSKGELGLTTHSVDRSSILTLGGNKERLQRSHQGLPSDRGRHFYLRGF 86


>ref|YP_009381683.1| hypothetical protein AEK19_MT1267 (mitochondrion) [Utricularia
           reniformis]
 gb|ART31474.1| hypothetical protein AEK19_MT1267 (mitochondrion) [Utricularia
           reniformis]
          Length = 64

 Score = 43.9 bits (102), Expect(2) = 3e-07
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = -3

Query: 283 RGFTICSFAFSRLLTALQNEVHINKG 206
           RG TICSFA SRLLT+LQN VH+ KG
Sbjct: 38  RGLTICSFALSRLLTSLQNSVHMFKG 63



 Score = 38.5 bits (88), Expect(2) = 3e-07
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = -1

Query: 357 LSTGTRNDCSDHTKVFRRIGAG 292
           +++  RN CSDHTKVFRRIGAG
Sbjct: 16  INSQRRNGCSDHTKVFRRIGAG 37