BLASTX nr result

ID: Acanthopanax21_contig00003936 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00003936
         (1107 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024171992.1| uncharacterized protein LOC112177999 [Rosa c...    42   1e-06

>ref|XP_024171992.1| uncharacterized protein LOC112177999 [Rosa chinensis]
          Length = 226

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 15/27 (55%), Positives = 24/27 (88%)
 Frame = +3

Query: 123 DGIEDVIDERVVSTRRGEYHQYLVKWE 203
           D +E+++DE+VVSTR+G Y +YL+KW+
Sbjct: 163 DVVENIVDEQVVSTRQGGYQKYLIKWK 189



 Score = 40.4 bits (93), Expect(2) = 1e-06
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = +2

Query: 203 DKPHSDCTLISREEFHRIDPTLLERYDSFLS 295
           D+P+SD T +++EE  RIDP + ERY SF+S
Sbjct: 190 DRPNSDNTWVTKEELQRIDPDIRERYYSFIS 220


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