BLASTX nr result

ID: Acanthopanax21_contig00003927 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00003927
         (583 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019080132.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_017242085.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06
gb|KZN03141.1| hypothetical protein DCAR_011897 [Daucus carota s...    57   5e-06
ref|XP_017242068.1| PREDICTED: putative pentatricopeptide repeat...    57   5e-06

>ref|XP_019080132.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610
           [Vitis vinifera]
          Length = 666

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = +2

Query: 2   QHPQKDEIYVQLEVLRKNIKAMGYVPDLRYALQPED 109
           QHPQK EIYV+LE LR+ IKAMGYVPDLRY L   D
Sbjct: 631 QHPQKKEIYVKLEELREKIKAMGYVPDLRYVLNNAD 666


>ref|XP_017242085.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like isoform X2 [Daucus carota subsp.
           sativus]
          Length = 719

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = +2

Query: 5   HPQKDEIYVQLEVLRKNIKAMGYVPDLRYALQ 100
           HPQKD+IYVQLEVL K IK MGYVP LRYALQ
Sbjct: 687 HPQKDDIYVQLEVLSKGIKDMGYVPCLRYALQ 718


>gb|KZN03141.1| hypothetical protein DCAR_011897 [Daucus carota subsp. sativus]
          Length = 751

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = +2

Query: 5   HPQKDEIYVQLEVLRKNIKAMGYVPDLRYALQ 100
           HPQKD+IYVQLEVL K IK MGYVP LRYALQ
Sbjct: 719 HPQKDDIYVQLEVLSKGIKDMGYVPCLRYALQ 750


>ref|XP_017242068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242069.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242070.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242071.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242072.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242074.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242075.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242076.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242078.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242079.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242080.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242081.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242083.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
 ref|XP_017242084.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970 isoform X1 [Daucus carota subsp. sativus]
          Length = 765

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = +2

Query: 5   HPQKDEIYVQLEVLRKNIKAMGYVPDLRYALQ 100
           HPQKD+IYVQLEVL K IK MGYVP LRYALQ
Sbjct: 733 HPQKDDIYVQLEVLSKGIKDMGYVPCLRYALQ 764


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